Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1129
         (498 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23448-3|AAO26017.1|  612|Caenorhabditis elegans Egg laying defe...    29   2.5  
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe...    29   2.5  
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe...    29   2.5  
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.     29   2.5  
Z78539-2|CAB01729.2|  410|Caenorhabditis elegans Hypothetical pr...    27   5.7  
AL032627-19|CAD66222.1|  309|Caenorhabditis elegans Hypothetical...    27   5.7  
AL032639-3|CAA21635.1|  283|Caenorhabditis elegans Hypothetical ...    27   7.6  
Z82274-4|CAB05228.1|  429|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z82274-3|CAB05229.1|  435|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z67756-3|CAA91764.3|  377|Caenorhabditis elegans Hypothetical pr...    27   10.0 
U14635-7|AAC46658.2|  521|Caenorhabditis elegans Hypothetical pr...    27   10.0 
U14635-6|AAP86617.1|  517|Caenorhabditis elegans Hypothetical pr...    27   10.0 

>U23448-3|AAO26017.1|  612|Caenorhabditis elegans Egg laying
           defective protein 27,isoform c protein.
          Length = 612

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 470 DSRRGHATITDQDDDDVPPIQGFSDDE 390
           D   G  TI + DDD +P + GF  +E
Sbjct: 104 DEEEGKMTIDEGDDDPMPVLNGFKKEE 130


>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying
           defective protein 27,isoform b protein.
          Length = 1124

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 470 DSRRGHATITDQDDDDVPPIQGFSDDE 390
           D   G  TI + DDD +P + GF  +E
Sbjct: 616 DEEEGKMTIDEGDDDPMPVLNGFKKEE 642


>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying
           defective protein 27,isoform a protein.
          Length = 1129

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 470 DSRRGHATITDQDDDDVPPIQGFSDDE 390
           D   G  TI + DDD +P + GF  +E
Sbjct: 619 DEEEGKMTIDEGDDDPMPVLNGFKKEE 645


>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
          Length = 1129

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 470 DSRRGHATITDQDDDDVPPIQGFSDDE 390
           D   G  TI + DDD +P + GF  +E
Sbjct: 619 DEEEGKMTIDEGDDDPMPVLNGFKKEE 645


>Z78539-2|CAB01729.2|  410|Caenorhabditis elegans Hypothetical
           protein C31E10.3 protein.
          Length = 410

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -2

Query: 263 ARNNPLSMIAYLFAL*SKCLFHIQIINN 180
           + NN L  I  LF++    +F IQI+NN
Sbjct: 118 SHNNELEEIGILFSMDFSAIFPIQIVNN 145


>AL032627-19|CAD66222.1|  309|Caenorhabditis elegans Hypothetical
           protein Y41C4A.16 protein.
          Length = 309

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +2

Query: 53  FSPLSIFYKCVTVPVRFNY-RTFSIQI 130
           FS +++F  CVT+P+ +NY  T   QI
Sbjct: 20  FSVVAVFSLCVTIPMVYNYVNTVKTQI 46


>AL032639-3|CAA21635.1|  283|Caenorhabditis elegans Hypothetical
           protein Y38F1A.2 protein.
          Length = 283

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 129 LLTPYLVRNIDKFEISTIIYNLNVKKTF 212
           +L PYL+RN    +I T++Y + +   F
Sbjct: 202 ILIPYLIRNFFNNDIFTLVYQVRIGFVF 229


>Z82274-4|CAB05228.1|  429|Caenorhabditis elegans Hypothetical
           protein JC8.6b protein.
          Length = 429

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -2

Query: 488 PHTPRYDSRRGHATITDQDDDDVPPIQGFSDDEPL 384
           PH P   +R G +++  Q +  +   QG   DEP+
Sbjct: 39  PHNPAQQNRPGTSSMIQQHNRSMEVNQGLVKDEPI 73


>Z82274-3|CAB05229.1|  435|Caenorhabditis elegans Hypothetical
           protein JC8.6a protein.
          Length = 435

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -2

Query: 497 PHSPHTPRYDSRRGHATITDQDDDDVPPIQGFSDDEPL 384
           PH+P+     +R G +++  Q +  +   QG   DEP+
Sbjct: 39  PHNPNLQAQQNRPGTSSMIQQHNRSMEVNQGLVKDEPI 76


>Z67756-3|CAA91764.3|  377|Caenorhabditis elegans Hypothetical
           protein R07A4.4 protein.
          Length = 377

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +3

Query: 30  LNEIFISIFLHYLSFTNV*LCLFVLITEHFQYKLLTPYLVRNIDKFEISTII 185
           L  +     LHY  F+++  C+  + T H + +  TP L   +D  E+ + +
Sbjct: 171 LRSVACHSILHYPDFSSL-NCILNVHTRHTKNQYFTPELAYKVDYVELGSCV 221


>U14635-7|AAC46658.2|  521|Caenorhabditis elegans Hypothetical
           protein C27H5.4a protein.
          Length = 521

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +3

Query: 96  FVLITEHFQYKLLTPYLVRNIDKFEISTIIYNLNVKKTFTL 218
           F LI EH Q+++L   L    ++F    +I +LN+   F +
Sbjct: 308 FFLICEHDQFQILFLLLWVPTNRFGTQAVIQSLNILSIFNV 348


>U14635-6|AAP86617.1|  517|Caenorhabditis elegans Hypothetical
           protein C27H5.4b protein.
          Length = 517

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +3

Query: 96  FVLITEHFQYKLLTPYLVRNIDKFEISTIIYNLNVKKTFTL 218
           F LI EH Q+++L   L    ++F    +I +LN+   F +
Sbjct: 304 FFLICEHDQFQILFLLLWVPTNRFGTQAVIQSLNILSIFNV 344


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,413,753
Number of Sequences: 27780
Number of extensions: 189382
Number of successful extensions: 569
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)