Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1128
(645 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 47 1e-05
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 46 3e-05
05_01_0103 + 686770-687017,687120-687270 44 8e-05
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 43 2e-04
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 40 0.001
03_06_0479 + 34217170-34217172,34217337-34217786 40 0.002
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 39 0.003
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 38 0.005
12_01_0849 + 7948693-7948996,7949829-7950610 35 0.048
02_04_0577 - 24011542-24011906,24012285-24012385,24013029-240132... 32 0.34
12_02_1091 - 26001129-26001181,26001292-26001325,26001339-260014... 31 1.0
07_03_0561 + 19485218-19485242,19485323-19486467,19487354-194874... 30 1.8
08_02_1170 + 24876197-24877070,24877563-24877606,24877805-248779... 29 3.2
05_06_0276 + 26878732-26879574,26879920-26880387,26880800-268810... 29 3.2
07_01_0139 - 1014952-1015165,1015271-1015350,1015420-1015629,101... 29 4.2
02_01_0260 - 1723476-1723502,1724051-1724148,1724276-1724339,172... 29 4.2
08_02_0955 + 22994266-22995630 28 5.5
01_01_0012 + 71903-72935,73468-73981,74619-76008 28 5.5
12_02_0346 - 17776871-17781445 28 7.3
12_02_0343 - 17748882-17753396 28 7.3
02_05_1127 + 34292894-34293284,34293948-34295443 28 7.3
09_02_0357 + 7788946-7789326,7789620-7789997 27 9.7
06_01_0642 + 4658771-4659248,4659322-4660208 27 9.7
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 27 9.7
02_04_0445 + 22991394-22992101,22993061-22993252,22993419-22994237 27 9.7
01_06_1522 - 37962431-37963060,37963216-37963542 27 9.7
01_06_0307 - 28361538-28361606,28361684-28361854,28361963-283620... 27 9.7
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 46.8 bits (106), Expect = 1e-05
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = -3
Query: 619 GECRYGLFDFEY-TAP-VPGHVGG*QETEALPDVVVPGHAKVKKKMLYSSSFDALKKSLV 446
G+CR+ ++DF++ TA VP ++ + P +AKV+ KMLY+SS + KK L
Sbjct: 82 GDCRFAIYDFDFLTAEDVP-------KSRIFYILWSPDNAKVRSKMLYASSNERFKKELN 134
Query: 445 GVQKYIQATD 416
G+Q +QATD
Sbjct: 135 GIQLEVQATD 144
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/67 (37%), Positives = 38/67 (56%)
Frame = -3
Query: 616 ECRYGLFDFEYTAPVPGHVGG*QETEALPDVVVPGHAKVKKKMLYSSSFDALKKSLVGVQ 437
ECRY +FDF++ Q+++ P ++V+ KMLY+SS D K+ L G+Q
Sbjct: 83 ECRYAVFDFDFVTDE-----NCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQ 137
Query: 436 KYIQATD 416
+QATD
Sbjct: 138 VELQATD 144
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = -3
Query: 616 ECRYGLFDFEYTAPVPGHVGG*QETEALPDVVVPGHAKVKKKMLYSSSFDALKKSLVGVQ 437
ECRY +FD+++ Q+++ P ++V+ KM+Y+SS D K+ L G+Q
Sbjct: 57 ECRYAIFDYDFVTEE-----NCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQ 111
Query: 436 KYIQATD 416
+QATD
Sbjct: 112 VELQATD 118
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/67 (37%), Positives = 39/67 (58%)
Frame = -3
Query: 616 ECRYGLFDFEYTAPVPGHVGG*QETEALPDVVVPGHAKVKKKMLYSSSFDALKKSLVGVQ 437
+CRY L+DF++ V G Q+++ P ++++ KMLYS+S D +K+ L G
Sbjct: 70 DCRYALYDFDF---VTGE--NVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFH 124
Query: 436 KYIQATD 416
IQATD
Sbjct: 125 YEIQATD 131
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = -3
Query: 616 ECRYGLFDFEYTAPVPGHVGG*QETEALPDVVVPGHAKVKKKMLYSSSFDALKKSLVGVQ 437
ECRY ++D ++ Q+++ P A+ + KMLY+SS D ++ L G+Q
Sbjct: 70 ECRYAVYDLDFVTDE-----NCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQ 124
Query: 436 KYIQATD 416
IQATD
Sbjct: 125 CEIQATD 131
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Frame = -3
Query: 613 CRYGLFDFEYTAPVPGHVGG*QETEALPDVVV------PGHAKVKKKMLYSSSFDALKKS 452
CRY ++D ++T E P + P A V+ KM+Y+SS + KK
Sbjct: 65 CRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEGFKKE 124
Query: 451 LVGVQKYIQATD 416
L GVQ +QATD
Sbjct: 125 LDGVQIDLQATD 136
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = -3
Query: 616 ECRYGLFDFEYTAPVPGHVGG*QETEALPDVVVPGHAKVKKKMLYSSSFDALKKSLVGVQ 437
ECRY +FDF++ Q+++ P +KV+ KMLY+SS D K+ L G+Q
Sbjct: 328 ECRYAVFDFDFVTDE-----NCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQ 382
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = -3
Query: 616 ECRYGLFDFEYTAPVPGHVGG*QETEALPDVVVPGHAKVKKKMLYSSSFDALKKSLVGVQ 437
+CRY ++DF++ Q+++ P ++++ KMLY++S + ++ L GV
Sbjct: 70 DCRYAIYDFDFVTEE-----NCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVH 124
Query: 436 KYIQATD 416
IQATD
Sbjct: 125 YEIQATD 131
>12_01_0849 + 7948693-7948996,7949829-7950610
Length = 361
Score = 35.1 bits (77), Expect = 0.048
Identities = 39/143 (27%), Positives = 55/143 (38%), Gaps = 11/143 (7%)
Frame = -1
Query: 564 TSEASKKQKLFLMSW-CPDTPRSRRRCCTLARSTL*KSPLSEFRSTSKRPTSRSVSGGRR 388
T +AS K W C S R C + + + L R + P SVS RR
Sbjct: 219 TGDASSPAK----QWRCRHCTASSRLCRLAGAAAVVIAILPRRRRVALHPGFPSVSPERR 274
Query: 387 R----EAPRHRSPINSIYTRARDETEPALRHS------CPDDTRPRHH*PLSIIKRKTNS 238
R P HRS + + RAR + A+ S P T P H P + R+ S
Sbjct: 275 RLRRSRPPPHRSSFGNPFRRARAPADVAISSSGIAASRLPSATPPLHPNPACVRYRRLRS 334
Query: 237 INMIDFTGGRTSCESARVGTTAP 169
++ GR+S + R+ P
Sbjct: 335 SSLTTPPVGRSSLPARRLAAPPP 357
>02_04_0577 -
24011542-24011906,24012285-24012385,24013029-24013287,
24014176-24014264,24015331-24015419
Length = 300
Score = 32.3 bits (70), Expect = 0.34
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 459 KSPLSEFRSTSKRPT-SRSVSGGRRREAPRHRSPINSIYTRA 337
+SP RS S+ P RS S GRR +PR RSP Y+R+
Sbjct: 122 RSPRYRGRSRSRSPRYRRSPSYGRRSYSPRDRSPKRRSYSRS 163
>12_02_1091 -
26001129-26001181,26001292-26001325,26001339-26001437,
26002327-26002369,26002389-26002494,26002776-26002818,
26003526-26003579,26003831-26003911,26003997-26004119,
26004197-26004846,26004928-26005554,26005633-26005870,
26006082-26006258,26006373-26006723,26006824-26007111,
26008340-26008462,26008551-26009007,26009115-26009263,
26009466-26009489
Length = 1239
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -2
Query: 464 SEKVPCRSSEVHPSDRPLEASQEAVEEKLRATDRQ*TAFTHELATKPNPLSDTPALTTRG 285
S+KVP R+ HP+ +PL +S+ E++ + LAT+ N + L+
Sbjct: 806 SDKVPKRNRSSHPTSKPLVSSKVPTEDRTTSAMPAKKRKQKNLATESNLKTKAVILSPES 865
Query: 284 H 282
H
Sbjct: 866 H 866
>07_03_0561 +
19485218-19485242,19485323-19486467,19487354-19487476,
19487553-19487626,19487886-19487946,19488285-19488370,
19488795-19488864,19489026-19489122,19489342-19489481,
19490225-19490308,19490313-19490346,19491833-19491951
Length = 685
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 115 AAPPFKPKRITASRQK*AGGGGTYP 189
A PP +PKR+ R+K AGG G P
Sbjct: 82 APPPPQPKRLQGGRKKGAGGHGKLP 106
>08_02_1170 +
24876197-24877070,24877563-24877606,24877805-24877900,
24877999-24878544
Length = 519
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -2
Query: 155 REAVMRFGLKGGAAVVTIWVAHLCCRCL*LPVTT 54
R +++ G+ G A+V++W+ + C + +PV T
Sbjct: 140 RPSLLLLGVTGTTALVSMWIHNTACTVMMMPVAT 173
>05_06_0276 +
26878732-26879574,26879920-26880387,26880800-26881021,
26881153-26881278,26881309-26881573,26881719-26881936
Length = 713
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -1
Query: 447 SEFRSTSKRPTSRSVSGGRRREAPRHRSPINSIYTRARDETEPALRHSCP 298
S R P R S R +PR RSP+ S T + E P R+ P
Sbjct: 21 SPARDRGSPPRRRERSPAARSRSPRRRSPVKS--TSSHRERSPVRRNGSP 68
>07_01_0139 -
1014952-1015165,1015271-1015350,1015420-1015629,
1015925-1016044,1016650-1016709,1017129-1017204,
1018189-1018352,1018428-1018490,1018815-1018902,
1018997-1019647,1019965-1020449
Length = 736
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 151 SRQK*AGGGGTYPRGLTRGPTTSKINHINTIRFPFNNTKR 270
S Q+ A + P GLT P+ S N +NT+ FP N++R
Sbjct: 685 SIQEVAPNFSSRPLGLTSNPSPSA-NLVNTVYFPIANSQR 723
>02_01_0260 -
1723476-1723502,1724051-1724148,1724276-1724339,
1724458-1724563,1724641-1724677,1724763-1724856,
1725452-1725568,1726450-1726714,1727329-1727396,
1727478-1727642
Length = 346
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = -1
Query: 588 NTRHQCQGTSEASKKQKLFLMSWCPDTPRSRRRC 487
NT H G S + + MSWCP P C
Sbjct: 290 NTDHNPAGEIPFSNSEGIVAMSWCPHNPNLLLAC 323
>08_02_0955 + 22994266-22995630
Length = 454
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -1
Query: 459 KSPLSEFRSTSKRPTSRSVSGGRRREAPRHRSPINSIY-TRARDETEP 319
K P + S S+ + GRRR R RSP S +R+R +T P
Sbjct: 4 KRPAAASGSASEASDCEAGGAGRRRSPSRSRSPSRSASPSRSRSKTPP 51
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = -1
Query: 423 RPTSRSVSGGRRREAPRHRSPINSIYTRARDETEPALRHS 304
R SRS S RR R RSPI +R P +RH+
Sbjct: 512 RGKSRSPSPSARRSKSRSRSPIKYRRSRRSRSYSPPVRHT 551
>12_02_0346 - 17776871-17781445
Length = 1524
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 510 CPGTTTSGRASVSC*PPTCPGTGAVYSKSNRPYLHSPVPPFCR 638
C T G+ C PPT A +K+N +L +P F R
Sbjct: 148 CLPATAVGKLLPCCSPPTVHNDDAAGAKTNEQHLQAPKLKFVR 190
>12_02_0343 - 17748882-17753396
Length = 1504
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +3
Query: 510 CPGTTTSGRASVSC*PPTCPGTGAVYSKSNRPYLHSPVPPFCR 638
C T G+ C PPT + +K+N +L +P F R
Sbjct: 149 CLSATAVGKFLPCCSPPTVRNVDSTAAKANEQHLQAPKLKFVR 191
>02_05_1127 + 34292894-34293284,34293948-34295443
Length = 628
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -1
Query: 510 TPRSRRRCCTLARSTL*KSPLSEFRSTSKRPTSRSVSGGRRREAPR 373
T SRRR T + + S S S RP + S + GR R PR
Sbjct: 11 TEDSRRRATTSTSTPTCSAATSRSASRSSRPLAPSRAPGRPRHPPR 56
>09_02_0357 + 7788946-7789326,7789620-7789997
Length = 252
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -1
Query: 507 PRSRRRCCTLARSTL*KSPLSEFRSTSKRPTSRSVSGGRRREAPRHRSPI 358
PRSRR+ L + + + R+ + P SRSV+ R +P SP+
Sbjct: 120 PRSRRKRQALGSGSARSTAPTPPRAHTTPPCSRSVAAPRASTSPLRPSPV 169
>06_01_0642 + 4658771-4659248,4659322-4660208
Length = 454
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/38 (26%), Positives = 23/38 (60%)
Frame = +1
Query: 229 HINTIRFPFNNTKRLVVSWPRVVRAGVSESGFGFVASS 342
H+ + FPF++ +++S+ R + A S F F++++
Sbjct: 3 HVAVVTFPFSSHAAVLLSFARALAAASPASTFSFLSTA 40
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = -1
Query: 459 KSPLSEFRSTSKR---PTSRSVSGGRRREAPRHRSPINSIYTRARDETEPALRHSCP 298
+SP + S +R P R S R +PR RSP+ + T + E P R+ P
Sbjct: 227 RSPARDRGSPPRRRSPPARRERSPAPRSRSPRRRSPVKT--TSSHRERSPVRRNGSP 281
>02_04_0445 + 22991394-22992101,22993061-22993252,22993419-22994237
Length = 572
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 319 GFGFVASSCVNAVYWRSVARSFSS 390
GFG V VNAV+W S+AR SS
Sbjct: 257 GFGIVFGG-VNAVFWSSLARVSSS 279
>01_06_1522 - 37962431-37963060,37963216-37963542
Length = 318
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 20 MVGRAHSPPGVKWLLEAID 76
+VG+ H PPG +WL E +D
Sbjct: 44 LVGQLHLPPGGRWLDEYMD 62
>01_06_0307 -
28361538-28361606,28361684-28361854,28361963-28362027,
28362467-28362565,28363005-28363099,28363199-28363413,
28364394-28364735,28365505-28365645,28365774-28365945,
28366073-28366176,28366799-28366911,28367158-28367222,
28367564-28367691
Length = 592
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +2
Query: 461 QSVERARVQHLLLDLGVSGHHDIRKSFCFLLASDVP 568
+S+ R RV+H++ + + ++I + FC + + VP
Sbjct: 96 ESIARIRVEHIIREQNILAAYEIVELFCEFVLARVP 131
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,459,098
Number of Sequences: 37544
Number of extensions: 442432
Number of successful extensions: 1464
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1448
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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