Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1128
         (645 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    26   1.2  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   1.6  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   1.6  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   2.0  
CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    25   2.7  
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    23   6.3  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   8.3  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   8.3  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 6/81 (7%)
 Frame = -1

Query: 504  RSRRRCCTLARSTL*KSPLSEFRSTS------KRPTSRSVSGGRRREAPRHRSPINSIYT 343
            RSR R  + +RS   K   S  RS S       R  SRS S G R+   R RS   S  +
Sbjct: 1098 RSRSRSRSRSRSGSAKGSRSRSRSGSGGSRSRSRSRSRSQSAGSRKSGSRSRSRSGSQAS 1157

Query: 342  RARDETEPALRHSCPDDTRPR 280
            R    +    R      +R R
Sbjct: 1158 RGSRRSRSRSRSRSGSRSRSR 1178


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
 Frame = +1

Query: 22  GWTSSQPTRC*VVTGSYRH--LQHKCATHIVTTAAPPFKPKR----ITASRQK*AGGGGT 183
           G  + Q  RC  +    +H   Q     H+  TA   + P+R    I   R   A GGG+
Sbjct: 132 GCNAGQTNRCSSLKDLIKHGETQAVIEIHLENTAFNAYDPERYGGRIICERTLNASGGGS 191

Query: 184 YPRGLTRGPTTS 219
           Y      G T S
Sbjct: 192 YKLKNEHGQTVS 203


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +2

Query: 107  LQRLPRPSNRNALLL---HGRNRQGAVVPTRADS 199
            LQRL R   R   L    HGRNR+    P+ AD+
Sbjct: 1143 LQRLYRQRAREGTLPTVPHGRNRRSRSAPSEADT 1176


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 375  RHRSPINSIYTRARDETEPALRHS 304
            RHRS + +  TR + +TE A+RH+
Sbjct: 1794 RHRSLVTATKTRKKQQTE-AIRHA 1816


>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 405 VSGGRRREAPRHRSPINSIYTRARDETEPALRH 307
           + GGRR   P H + I+ I  R R + E  ++H
Sbjct: 267 MGGGRREFLPTHETDIDGIRGR-RTDGEDLIKH 298



 Score = 23.8 bits (49), Expect = 4.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 425 LDVLLNSDKGLFQSVERARVQH 490
           +D+L  +D G F  VE  R+ H
Sbjct: 361 MDILERNDNGYFLFVEGGRIDH 382


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -1

Query: 429 SKRPTSRSVSGGRRREAPRHRSPINSIYTRARDETEPALR 310
           SKR    +V+   R  AP+ ++P  +   +A+ E +  LR
Sbjct: 79  SKRRKVGTVTKAYREPAPKKQAPAKAKEPKAKAERQSTLR 118


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 555 PPTCPGTGAVYS 590
           P TCPG G V+S
Sbjct: 299 PKTCPGEGIVHS 310


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 627 AVPGNADMACLTLNTRHQCQGTSEASKKQ 541
           A P + D++ L    RH  +    ASKKQ
Sbjct: 317 ASPTDPDISALDRQARHALKTAIRASKKQ 345


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,187
Number of Sequences: 2352
Number of extensions: 15158
Number of successful extensions: 39
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)