Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1128
(645 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g01750.1 68414.m00094 actin-depolymerizing factor, putative s... 49 3e-06
At5g59890.2 68418.m07511 actin-depolymerizing factor 4 (ADF4) id... 47 9e-06
At5g59890.1 68418.m07510 actin-depolymerizing factor 4 (ADF4) id... 47 9e-06
At3g46010.1 68416.m04978 actin-depolymerizing factor 1 (ADF1) id... 47 9e-06
At4g00680.1 68417.m00093 actin-depolymerizing factor, putative s... 47 1e-05
At5g59880.1 68418.m07508 actin-depolymerizing factor 3 (ADF3) id... 46 2e-05
At5g52360.1 68418.m06497 actin-depolymerizing factor, putative s... 46 2e-05
At4g25590.1 68417.m03687 actin-depolymerizing factor, putative s... 44 7e-05
At3g46000.1 68416.m04977 actin-depolymerizing factor, putative (... 44 7e-05
At3g45990.1 68416.m04976 actin-depolymerizing factor, putative s... 44 9e-05
At2g16700.1 68415.m01916 actin-depolymerizing factor 5 (ADF5) id... 41 6e-04
At4g34970.1 68417.m04957 actin-depolymerizing factor, putative s... 40 0.002
At2g31200.1 68415.m03810 actin-depolymerizing factor 6 (ADF6) id... 39 0.003
At3g61910.1 68416.m06953 no apical meristem (NAM) family protein... 32 0.28
At2g23190.1 68415.m02770 cytochrome P450, putative Similar to C... 31 0.87
At5g01380.1 68418.m00051 expressed protein 30 1.1
At3g49430.1 68416.m05403 pre-mRNA splicing factor, putative stro... 30 1.1
At5g20920.2 68418.m02485 eukaryotic translation initiation facto... 29 2.0
At5g20920.1 68418.m02484 eukaryotic translation initiation facto... 29 2.0
At3g01560.1 68416.m00086 proline-rich family protein contains pr... 29 2.0
At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,... 29 2.6
At1g14190.1 68414.m01679 glucose-methanol-choline (GMC) oxidored... 29 2.6
At1g14185.1 68414.m01678 glucose-methanol-choline (GMC) oxidored... 29 2.6
At1g31950.1 68414.m03927 terpene synthase/cyclase family protein... 29 3.5
At5g52340.1 68418.m06495 exocyst subunit EXO70 family protein st... 28 4.6
At3g14520.1 68416.m01840 terpene synthase/cyclase family protein... 28 4.6
At2g40070.1 68415.m04923 expressed protein 28 4.6
At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family... 28 6.1
At5g55510.1 68418.m06914 mitochondrial import inner membrane tra... 27 8.1
At5g28810.1 68418.m03542 hypothetical protein 27 8.1
At4g25540.1 68417.m03682 DNA mismatch repair protein MSH3 (MSH3)... 27 8.1
At1g65070.1 68414.m07377 DNA mismatch repair MutS family protein... 27 8.1
At1g64430.1 68414.m07302 expressed protein 27 8.1
>At1g01750.1 68414.m00094 actin-depolymerizing factor, putative
strong similarity to SP|P30175 Actin-depolymerizing
factor (ADF) {Lilium longiflorum}; contains Pfam profile
PF00241: Cofilin/tropomyosin-type actin-binding protein
Length = 140
Score = 48.8 bits (111), Expect = 3e-06
Identities = 25/67 (37%), Positives = 40/67 (59%)
Frame = -3
Query: 616 ECRYGLFDFEYTAPVPGHVGG*QETEALPDVVVPGHAKVKKKMLYSSSFDALKKSLVGVQ 437
ECRY ++D+++T P Q+++ P ++V+ KMLY+SS D K+ L G+Q
Sbjct: 64 ECRYAVYDYDFTTPE-----NCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQ 118
Query: 436 KYIQATD 416
+QATD
Sbjct: 119 VELQATD 125
>At5g59890.2 68418.m07511 actin-depolymerizing factor 4 (ADF4)
identical to SP|Q9ZSK3 Actin-depolymerizing factor 4
(ADF-4) (AtADF4) {Arabidopsis thaliana}
Length = 132
Score = 47.2 bits (107), Expect = 9e-06
Identities = 25/67 (37%), Positives = 38/67 (56%)
Frame = -3
Query: 616 ECRYGLFDFEYTAPVPGHVGG*QETEALPDVVVPGHAKVKKKMLYSSSFDALKKSLVGVQ 437
ECRY ++DF++ Q+++ P AKV+ KM+Y+SS D K+ L G+Q
Sbjct: 57 ECRYAIYDFDFVT-----AENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQ 111
Query: 436 KYIQATD 416
+QATD
Sbjct: 112 VELQATD 118
>At5g59890.1 68418.m07510 actin-depolymerizing factor 4 (ADF4)
identical to SP|Q9ZSK3 Actin-depolymerizing factor 4
(ADF-4) (AtADF4) {Arabidopsis thaliana}
Length = 139
Score = 47.2 bits (107), Expect = 9e-06
Identities = 25/67 (37%), Positives = 38/67 (56%)
Frame = -3
Query: 616 ECRYGLFDFEYTAPVPGHVGG*QETEALPDVVVPGHAKVKKKMLYSSSFDALKKSLVGVQ 437
ECRY ++DF++ Q+++ P AKV+ KM+Y+SS D K+ L G+Q
Sbjct: 64 ECRYAIYDFDFVT-----AENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQ 118
Query: 436 KYIQATD 416
+QATD
Sbjct: 119 VELQATD 125
>At3g46010.1 68416.m04978 actin-depolymerizing factor 1 (ADF1)
identical to SP|Q39250 Actin-depolymerizing factor 1
(ADF-1) (AtADF1) {Arabidopsis thaliana}
Length = 139
Score = 47.2 bits (107), Expect = 9e-06
Identities = 25/67 (37%), Positives = 38/67 (56%)
Frame = -3
Query: 616 ECRYGLFDFEYTAPVPGHVGG*QETEALPDVVVPGHAKVKKKMLYSSSFDALKKSLVGVQ 437
ECRY ++DF++ Q+++ P AKV+ KM+Y+SS D K+ L G+Q
Sbjct: 64 ECRYAIYDFDFVT-----AENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQ 118
Query: 436 KYIQATD 416
+QATD
Sbjct: 119 VELQATD 125
>At4g00680.1 68417.m00093 actin-depolymerizing factor, putative
strong similarity to SP|P30175 Actin-depolymerizing
factor (ADF) {Lilium longiflorum}; contains Pfam profile
PF00241: Cofilin/tropomyosin-type actin-binding protein
Length = 140
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = -3
Query: 616 ECRYGLFDFEYTAPVPGHVGG*QETEALPDVVVPGHAKVKKKMLYSSSFDALKKSLVGVQ 437
ECRY ++DF++T Q+++ P ++V+ KMLY+SS D K+ + G+Q
Sbjct: 64 ECRYAVYDFDFTTE-----DNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQ 118
Query: 436 KYIQATD 416
+QATD
Sbjct: 119 VELQATD 125
>At5g59880.1 68418.m07508 actin-depolymerizing factor 3 (ADF3)
identical to SP|Q9ZSK4 Actin-depolymerizing factor 3
(ADF 3) (AtADF3) {Arabidopsis thaliana}
Length = 139
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/67 (37%), Positives = 37/67 (55%)
Frame = -3
Query: 616 ECRYGLFDFEYTAPVPGHVGG*QETEALPDVVVPGHAKVKKKMLYSSSFDALKKSLVGVQ 437
ECRY +FDF++ + G + P A+V+ KM+Y+SS D K+ L G+Q
Sbjct: 64 ECRYAIFDFDFVSSE-----GVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQ 118
Query: 436 KYIQATD 416
+QATD
Sbjct: 119 VELQATD 125
>At5g52360.1 68418.m06497 actin-depolymerizing factor, putative
strong similarity to pollen specific
actin-depolymerizing factor 2 [Nicotiana tabacum]
GI:22857914; contains Pfam profile PF00241:
Cofilin/tropomyosin-type actin-binding protein
Length = 137
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = -3
Query: 616 ECRYGLFDFEYTAPVPGHVGG*QETEALPDVVVPGHAKVKKKMLYSSSFDALKKSLVGVQ 437
ECRY ++DF++T Q+++ P ++V+ KM+Y+SS D K+ L G+Q
Sbjct: 62 ECRYAVYDFDFTT-----AENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQ 116
Query: 436 KYIQATD 416
+QATD
Sbjct: 117 VELQATD 123
>At4g25590.1 68417.m03687 actin-depolymerizing factor, putative
strong similarity to pollen specific
actin-depolymerizing factor 2 [Nicotiana tabacum]
GI:22857914; contains Pfam profile PF00241:
Cofilin/tropomyosin-type actin-binding protein
Length = 130
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = -3
Query: 616 ECRYGLFDFEYTAPVPGHVGG*QETEALPDVVVPGHAKVKKKMLYSSSFDALKKSLVGVQ 437
ECRY +FDF++ Q+++ P ++V+ KM+Y+SS D K+ L G+Q
Sbjct: 55 ECRYAVFDFDFITDE-----NCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQ 109
Query: 436 KYIQATD 416
+QATD
Sbjct: 110 VELQATD 116
>At3g46000.1 68416.m04977 actin-depolymerizing factor, putative
(ADF2) strong similarity to SP|Q9ZSK3
Actin-depolymerizing factor 4 (ADF-4) (AtADF4)
{Arabidopsis thaliana}; contains Pfam profile PF00241:
Cofilin/tropomyosin-type actin-binding protein
Length = 137
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = -3
Query: 616 ECRYGLFDFEYTAPVPGHVGG*QETEALPDVVVPGHAKVKKKMLYSSSFDALKKSLVGVQ 437
+CRY ++DF++ Q+++ P AKV+ KM+Y+SS D K+ L G+Q
Sbjct: 62 DCRYCIYDFDFVT-----AENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQ 116
Query: 436 KYIQATD 416
+QATD
Sbjct: 117 VELQATD 123
>At3g45990.1 68416.m04976 actin-depolymerizing factor, putative
similar to SP|Q9ZSK3 Actin-depolymerizing factor 4
(ADF-4) (AtADF4) {Arabidopsis thaliana}; contains Pfam
profile PF00241: Cofilin/tropomyosin-type actin-binding
protein
Length = 133
Score = 44.0 bits (99), Expect = 9e-05
Identities = 27/67 (40%), Positives = 36/67 (53%)
Frame = -3
Query: 616 ECRYGLFDFEYTAPVPGHVGG*QETEALPDVVVPGHAKVKKKMLYSSSFDALKKSLVGVQ 437
ECRY + D E+ VPG E + P AK++KKM+YSS+ D K+ L G+Q
Sbjct: 62 ECRYAILDIEF---VPG------ERKICFIAWSPSTAKMRKKMIYSSTKDRFKRELDGIQ 112
Query: 436 KYIQATD 416
ATD
Sbjct: 113 VEFHATD 119
>At2g16700.1 68415.m01916 actin-depolymerizing factor 5 (ADF5)
identical to SP|Q9ZNT3 Actin-depolymerizing factor 5
(ADF-5) (AtADF5) {Arabidopsis thaliana}
Length = 143
Score = 41.1 bits (92), Expect = 6e-04
Identities = 21/67 (31%), Positives = 39/67 (58%)
Frame = -3
Query: 616 ECRYGLFDFEYTAPVPGHVGG*QETEALPDVVVPGHAKVKKKMLYSSSFDALKKSLVGVQ 437
+CRY +FDF++ V ++++ P +K++ K+LY++S D L++ L G+
Sbjct: 68 DCRYAVFDFDFVT-----VDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEGIH 122
Query: 436 KYIQATD 416
+QATD
Sbjct: 123 YELQATD 129
>At4g34970.1 68417.m04957 actin-depolymerizing factor, putative
similar to SP|Q9ZNT3 Actin-depolymerizing factor 5
(ADF-5) (AtADF5) {Arabidopsis thaliana}; contains Pfam
profile PF00241: Cofilin/tropomyosin-type actin-binding
protein
Length = 130
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/67 (31%), Positives = 38/67 (56%)
Frame = -3
Query: 616 ECRYGLFDFEYTAPVPGHVGG*QETEALPDVVVPGHAKVKKKMLYSSSFDALKKSLVGVQ 437
+CRY +FDF+Y V + ++ P +++++KM+Y++S L++ L GV
Sbjct: 55 DCRYAVFDFDYVT-----VDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVH 109
Query: 436 KYIQATD 416
+QATD
Sbjct: 110 YELQATD 116
>At2g31200.1 68415.m03810 actin-depolymerizing factor 6 (ADF6)
identical to SP|Q9ZSK2 Actin-depolymerizing factor 6
(ADF-6) (AtADF6) {Arabidopsis thaliana}
Length = 146
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = -3
Query: 616 ECRYGLFDFEYTAPVPGHVGG*QETEALPDVVVPGHAKVKKKMLYSSSFDALKKSLVGVQ 437
+CRY ++DF++ Q+++ P + ++ K+LYS+S D L + L G+
Sbjct: 71 DCRYAVYDFDFVTSE-----NCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIH 125
Query: 436 KYIQATD 416
IQATD
Sbjct: 126 YEIQATD 132
>At3g61910.1 68416.m06953 no apical meristem (NAM) family protein no
apical meristem (NAM) - Petunia hybrida, EMBL:PHDNANAM
Length = 334
Score = 32.3 bits (70), Expect = 0.28
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +2
Query: 515 GHHDIRKSFCFLLASDVPWHWCRVFK----VKQAISAFPGTAL 631
G HD+ C ++ SD W CRVFK K IS+ P +++
Sbjct: 149 GDHDVNVETCDVIGSDEGWVVCRVFKKNNLCKNMISSSPASSV 191
>At2g23190.1 68415.m02770 cytochrome P450, putative Similar to
Cytochrome P450 91A1 (SP:Q9FG65) [Arabidopsis thaliana];
Length = 543
Score = 30.7 bits (66), Expect = 0.87
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 362 GDRWRGASLRRPPETLREVGRLDVLLNSDKGLFQSVERARVQHLLLDLGVSGHHDIRK 535
GD WR LR +G L++ + F SV + ++HLLL L + H K
Sbjct: 167 GDHWRN---------LRRIGTLEIFSSHKLNGFLSVRKDEIRHLLLRLSKNSQHGFAK 215
>At5g01380.1 68418.m00051 expressed protein
Length = 323
Score = 30.3 bits (65), Expect = 1.1
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 3/118 (2%)
Frame = +1
Query: 70 YRHLQHKCATHIVTTAAPPFKPKRITASRQK*AGGGGTYPRGLTRGPTTSKINHI-NTIR 246
+ H H+ H++ P P TA+ GGGG T ++ I +
Sbjct: 9 HHHHHHQLHHHLIQQQQLPPPPLSTTATMDPGGGGGGGERIPQWSIEETKELLAIREELD 68
Query: 247 FPFNNTKRLVVSWPRVVRAGVSESGFGFVASSCVNAVYWRSVARSFSS--TAS*DASR 414
F TKR + W VV A +++ GF A C + W+++ + + T DA R
Sbjct: 69 QTFMETKRNKLLW-EVVAAKMADKGFVRSAEQCKSK--WKNLVTRYKACETTEPDAIR 123
>At3g49430.1 68416.m05403 pre-mRNA splicing factor, putative strong
similarity to SP|O22315 Pre-mRNA splicing factor SF2
(SR1 protein) {Arabidopsis thaliana}
Length = 300
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = -1
Query: 504 RSRRRCCTLARSTL*KSPLSEFRSTSKRPTSRSVSGGRRREAPRHRSPINSIYTRARDET 325
RS R +L+RS KSP + + +R SRS+S R + +SP ++ +R ++
Sbjct: 226 RSHSRSRSLSRS---KSPRKDLSKSPRRSLSRSISKSRSPSPDKKKSPPRAM---SRSKS 279
Query: 324 EPALRHSCPDDTRPR 280
R P + P+
Sbjct: 280 RSRSRSRSPSKSPPK 294
>At5g20920.2 68418.m02485 eukaryotic translation initiation factor 2
subunit 2, putative / eIF-2-beta, putative similar to
SP|P41035 Eukaryotic translation initiation factor 2
subunit (eIF-2-beta) {Oryctolagus cuniculus}; contains
Pfam profile PF01873: Domain found in IF2B/IF5
Length = 267
Score = 29.5 bits (63), Expect = 2.0
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +2
Query: 362 GDRWRGASLRRPPETLREVGRLDVLLNSDKGLFQSVERAR---VQHLLLDLGVSGHHD 526
GDR R ++ RPP+ LRE + V +N L +++ R +Q+LL +LG SG D
Sbjct: 137 GDRRR--TVMRPPQVLREGTKKTVFVNF-MDLCKTMHRQPDHVMQYLLAELGTSGSLD 191
>At5g20920.1 68418.m02484 eukaryotic translation initiation factor 2
subunit 2, putative / eIF-2-beta, putative similar to
SP|P41035 Eukaryotic translation initiation factor 2
subunit (eIF-2-beta) {Oryctolagus cuniculus}; contains
Pfam profile PF01873: Domain found in IF2B/IF5
Length = 268
Score = 29.5 bits (63), Expect = 2.0
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +2
Query: 362 GDRWRGASLRRPPETLREVGRLDVLLNSDKGLFQSVERAR---VQHLLLDLGVSGHHD 526
GDR R ++ RPP+ LRE + V +N L +++ R +Q+LL +LG SG D
Sbjct: 138 GDRRR--TVMRPPQVLREGTKKTVFVNF-MDLCKTMHRQPDHVMQYLLAELGTSGSLD 192
>At3g01560.1 68416.m00086 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 511
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 166 AGGGGTYPRGLTRGPTTSKINHINTIRFPFNNTKRLV 276
+GGG + PR +R P I+ + T+ FP + + V
Sbjct: 441 SGGGSSSPRSESRAPIDDVIDRVTTMGFPRDQVRATV 477
>At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase GI:7939617 from
[Lycopersicon esculentum]
Length = 887
Score = 29.1 bits (62), Expect = 2.6
Identities = 24/85 (28%), Positives = 40/85 (47%)
Frame = -1
Query: 306 SCPDDTRPRHH*PLSIIKRKTNSINMIDFTGGRTSCESARVGTTAPCLFLP*SSNAFRFE 127
+C T+ R+H P S +K +N + + + TGG S + TA L S + +
Sbjct: 717 NCGKPTQTRYHVPRSWLKPSSNLLVLFEETGGNPFKISVKT-VTAGILCGQVSESHYPPL 775
Query: 126 GRGSRCNYMGGTFML*MSIASSNHL 52
+ S +Y+ GT + S+A HL
Sbjct: 776 RKWSTPDYINGTMSI-NSVAPEVHL 799
>At1g14190.1 68414.m01679 glucose-methanol-choline (GMC)
oxidoreductase family protein similar to mandelonitrile
lyase from Prunus serotina [SP|P52706, SP|P52707];
contains Pfam profile PF00732 GMC oxidoreductase
Length = 501
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 340 SCVNAVYWRSVARSFSSTAS*DASRGRSLGCTSELRQGTFS 462
S +N + SVA+SF+S + RGR LG +S + G +S
Sbjct: 64 SLLNTDEYSSVAQSFTSVDGIENYRGRVLGGSSAINGGFYS 104
>At1g14185.1 68414.m01678 glucose-methanol-choline (GMC)
oxidoreductase family protein similar to mandelonitrile
lyase from Prunus serotina [SP|P52706, SP|P52707];
contains Pfam profile PF00732 GMC oxidoreductase
Length = 503
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 340 SCVNAVYWRSVARSFSSTAS*DASRGRSLGCTSELRQGTFS 462
S +N + SVA+SF+S RGR LG +S + G +S
Sbjct: 85 SLINTDEYSSVAQSFTSVDGIKNHRGRVLGGSSAINGGFYS 125
>At1g31950.1 68414.m03927 terpene synthase/cyclase family protein
similar to sesquiterpene synthases
[GI:11934937][Lycopersicon hirsutum],
[GI:11934933][Lycopersicon esculentum]; contains Pfam
profile: PF01397: Terpene synthase family
Length = 606
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +2
Query: 386 LRRPPETLREVGRLDVLLNSDKGLFQSVERARVQHLLLDLGVSGHHD 526
L R ET + + R D L++S+ E+ R+ HLL+ +G+S H D
Sbjct: 93 LEREIETTKPLAR-DKLMSSESS---DKEKIRLIHLLVSMGISYHFD 135
>At5g52340.1 68418.m06495 exocyst subunit EXO70 family protein
strong similarity to unknown protein (emb|CAB83315.1);
contains Pfam domain PF03081: Exo70 exocyst complex
subunit;
Length = 695
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 450 LSEFRSTSKRPTSRSVSGGRRREAPRHRSPINSIYT 343
L E ++ RP+S GG + P H+S N+I+T
Sbjct: 226 LFECLPSNLRPSSEGEGGGGKTHDPHHKSLENAIFT 261
>At3g14520.1 68416.m01840 terpene synthase/cyclase family protein
similar to terpene synthase GB:CAA72074 from
[Arabidopsis thaliana]
Length = 605
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +2
Query: 365 DRWRGASLRRPPETLREVGRLDVLLNSDKGLFQSVERARVQHLLLDLGVSGHHD 526
DR L R ET++ + + D+L++S E+ R+ HLL+ LG S H D
Sbjct: 83 DRGEFDELEREIETMKPLVK-DMLMSSQSS---DKEKIRLIHLLVSLGSSYHFD 132
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/55 (32%), Positives = 22/55 (40%)
Frame = -1
Query: 516 PDTPRSRRRCCTLARSTL*KSPLSEFRSTSKRPTSRSVSGGRRREAPRHRSPINS 352
P TP SR + R +L S + +T P SRS S R P P S
Sbjct: 205 PSTPTSRATVSSATRPSLTNSRSTVSATTKPTPMSRSTSLSSSRLTPTASKPTTS 259
>At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to hydroxyproline-rich
glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765
Length = 219
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 513 PGTTTSGRASVSC*PPTCPGTGAVYSKSNRPYLHSPVPP 629
P TT SG + PP P A+ + + + SP PP
Sbjct: 85 PATTNSGHHQLRPPPPPPPPLSAITTTGHHHHRRSPPPP 123
>At5g55510.1 68418.m06914 mitochondrial import inner membrane
translocase subunit Tim17/Tim22/Tim23 family protein
weak similarity to SP|Q99595 Mitochondrial import inner
membrane translocase subunit TIM17 A {Homo sapiens};
contains Pfam profile PF02466: Mitochondrial import
inner membrane translocase subunit Tim17
Length = 186
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -1
Query: 429 SKRPTS--RSVSGGRRREAPRHRSPINSIYTRARDETEPALRHSCPDDTRPR 280
+KR T+ SVS ++ +P+H P+ S+ DE + A C T+P+
Sbjct: 127 NKRQTALAHSVSFRQQTRSPQHDLPLLSLAIPIHDEIKGAFSSFCNSLTKPK 178
>At5g28810.1 68418.m03542 hypothetical protein
Length = 560
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 304 GVSES-GFGFVASSCVNAVYWRSVARSFSSTA 396
G+ E+ GFG +CV + WRS + F+ TA
Sbjct: 185 GIGEACGFGKTTLTCVPLLDWRSSRKRFNFTA 216
>At4g25540.1 68417.m03682 DNA mismatch repair protein MSH3 (MSH3)
identical to SP|O65607 DNA mismatch repair protein MSH3
(AtMsh3) {Arabidopsis thaliana}
Length = 1081
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +1
Query: 208 PTTSKINHINTIRFPFNNTKRLVVSWPRVVRAGVSESGFGFVASSCVNAVYWRSVARSFS 387
P SK+ +N ++ N+TK+ + P + AG+ E + VN W S +SFS
Sbjct: 679 PVDSKVP-MNWVKV--NSTKKTIRYHPPEIVAGLDELALATEHLAIVNRASWDSFLKSFS 735
>At1g65070.1 68414.m07377 DNA mismatch repair MutS family protein
contains Pfam profile PF00488: MutS domain V
Length = 857
Score = 27.5 bits (58), Expect = 8.1
Identities = 20/73 (27%), Positives = 29/73 (39%)
Frame = -1
Query: 609 DMACLTLNTRHQCQGTSEASKKQKLFLMSWCPDTPRSRRRCCTLARSTL*KSPLSEFRST 430
D+ L +T Q S SK+Q + C D R+C A+ T S + E +
Sbjct: 757 DIKPLPRSTSSQTSNRSLRSKRQFFVVPDNCTDKHERARQCVANAKRTSADSNVKEHIGS 816
Query: 429 SKRPTSRSVSGGR 391
+ RS S R
Sbjct: 817 KRNAGGRSGSPAR 829
>At1g64430.1 68414.m07302 expressed protein
Length = 559
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 291 CRQGRSVGERVRFRRELVCKCCLLAIGGAE 380
CR G S E V F + + C CL+AI A+
Sbjct: 180 CRVGISPAEEVPFGKIVRCPSCLIAIAVAQ 209
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,481,469
Number of Sequences: 28952
Number of extensions: 309174
Number of successful extensions: 1018
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1334473344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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