Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1127
(663 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 58 4e-09
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 52 3e-07
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 46 2e-05
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 43 2e-04
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 42 5e-04
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 42 5e-04
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 42 5e-04
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 39 0.003
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 38 0.005
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 36 0.026
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 36 0.026
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 34 0.078
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 34 0.078
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 34 0.10
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 34 0.10
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 34 0.10
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 33 0.18
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 33 0.18
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 33 0.18
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 33 0.18
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 33 0.18
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 33 0.18
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 33 0.24
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 33 0.24
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 32 0.42
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 32 0.42
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 32 0.42
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 32 0.42
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 32 0.42
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 31 0.55
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 31 0.96
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 31 0.96
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 31 0.96
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 31 0.96
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 31 0.96
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 30 1.7
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 30 1.7
AC024776-17|ABN43080.1| 365|Caenorhabditis elegans Hypothetical... 30 1.7
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 2.2
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 29 2.9
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 29 2.9
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 6.8
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 27 9.0
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 27 9.0
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 62.9 bits (146), Expect = 2e-10
Identities = 36/119 (30%), Positives = 61/119 (51%)
Frame = +1
Query: 259 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 438
+L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + +
Sbjct: 86 NLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-L 144
Query: 439 KTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPAKRWPTSCQPLCT*ITNPPIRRGDGP 615
+++PT IQ+ WPIAMSG+ ++ K K L +RG+GP
Sbjct: 145 LYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGP 203
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/28 (60%), Positives = 25/28 (89%)
Frame = +3
Query: 504 KDLVGVAQTGSGKTLAYILPAIVHINNQ 587
+D++ +A+TGSGKTLA++LPA+VHI Q
Sbjct: 167 RDIISIAKTGSGKTLAFMLPALVHITKQ 194
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 614 PIALVLAPTRELAQQI 661
P LVL PTRELAQQ+
Sbjct: 203 PAVLVLLPTRELAQQV 218
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/120 (27%), Positives = 57/120 (47%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
+ Q FNKNFY+ H + + +V +N + V G++ P+ F +F + +
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 436 VKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPAKRWPTSCQPLCT*ITNPPIRRGDGP 615
++ Y++PTPIQA P A+SG+ L K K + + P ++ G+GP
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGP 339
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 58.4 bits (135), Expect = 4e-09
Identities = 25/57 (43%), Positives = 35/57 (61%)
Frame = +1
Query: 337 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + +
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNR 339
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/29 (55%), Positives = 24/29 (82%)
Frame = +3
Query: 504 KDLVGVAQTGSGKTLAYILPAIVHINNQP 590
+D++GVA+TGSGKT A++LP +V I + P
Sbjct: 339 RDVIGVAETGSGKTAAFLLPLLVWITSLP 367
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 614 PIALVLAPTRELAQQI 661
P A+++APTRELAQQI
Sbjct: 379 PYAIIMAPTRELAQQI 394
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 52.4 bits (120), Expect = 3e-07
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 432
V + F KNFY + + + EV+ YR + + +TV G++ PI+ + + +
Sbjct: 258 VYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMN 317
Query: 433 GVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPAKRWPTSCQPLCT*ITNPPIRRGDG 612
+K Y +PT IQAQ P MSG+ + K K + P + GDG
Sbjct: 318 VLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDG 377
Query: 613 P 615
P
Sbjct: 378 P 378
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/29 (58%), Positives = 25/29 (86%)
Frame = +3
Query: 504 KDLVGVAQTGSGKTLAYILPAIVHINNQP 590
+D++G+A+TGSGKTLA++LP HI +QP
Sbjct: 342 RDVIGIAKTGSGKTLAFLLPMFRHILDQP 370
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +2
Query: 614 PIALVLAPTRELAQQ 658
PIA++LAPTRELA Q
Sbjct: 378 PIAVILAPTRELAMQ 392
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/30 (63%), Positives = 27/30 (90%)
Frame = +3
Query: 504 KDLVGVAQTGSGKTLAYILPAIVHINNQPA 593
+D +GV+QTGSGKTLA++LPA++HI+ Q A
Sbjct: 122 QDCIGVSQTGSGKTLAFLLPALLHIDAQLA 151
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +1
Query: 364 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGK 507
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG+
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQ 122
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 614 PIALVLAPTRELAQQI 661
P LVL+PTRELAQQI
Sbjct: 164 PFVLVLSPTRELAQQI 179
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 355 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
V +G +V PI F + + +++++ +KT GY PTP+Q P G+
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGR 204
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 504 KDLVGVAQTGSGKTLAYILPAI 569
+DL+ AQTGSGKT A+++P +
Sbjct: 204 RDLMSCAQTGSGKTAAFLVPLV 225
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +1
Query: 331 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ +
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 177
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 504 KDLVGVAQTGSGKTLAYILPAIVHI 578
+DL+ AQTGSGKT A++LP I HI
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHI 201
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 614 PIALVLAPTRELAQQI 661
P ALVL+PTRELA QI
Sbjct: 223 PCALVLSPTRELAIQI 238
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +1
Query: 331 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ +
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 161
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 504 KDLVGVAQTGSGKTLAYILPAIVHI 578
+DL+ AQTGSGKT A++LP I HI
Sbjct: 161 RDLMSCAQTGSGKTAAFLLPIIQHI 185
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 614 PIALVLAPTRELAQQI 661
P ALVL+PTRELA QI
Sbjct: 207 PCALVLSPTRELAIQI 222
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +1
Query: 331 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ +
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 158
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 504 KDLVGVAQTGSGKTLAYILPAIVHI 578
+DL+ AQTGSGKT A++LP I HI
Sbjct: 158 RDLMSCAQTGSGKTAAFLLPIIQHI 182
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 614 PIALVLAPTRELAQQI 661
P ALVL+PTRELA QI
Sbjct: 204 PCALVLSPTRELAIQI 219
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +1
Query: 292 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 468
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 469 IQAQGWPIAMSGK 507
IQ QG P+A+SG+
Sbjct: 216 IQIQGIPVALSGR 228
Score = 35.9 bits (79), Expect = 0.026
Identities = 11/23 (47%), Positives = 20/23 (86%)
Frame = +3
Query: 504 KDLVGVAQTGSGKTLAYILPAIV 572
+D++G+A TGSGKT+ ++LP ++
Sbjct: 228 RDMIGIASTGSGKTMTFVLPLVM 250
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 438 KDNGLQRTDAHPSSRLADSYVWKDLVGVAQTGSGKTLAYILPAI 569
KDN + +A S D+VG A+TGSGKTLA ++P +
Sbjct: 92 KDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVL 135
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +3
Query: 435 CKDNGLQRTDAHPSSRLADSYVWKDLVGVAQTGSGKTLAYILPAIVHINNQP 590
C+ G + + L + KD++G+A+TGSGKT A+ +P + + + P
Sbjct: 59 CQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHP 110
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 35.9 bits (79), Expect = 0.026
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = +3
Query: 504 KDLVGVAQTGSGKTLAYILPAI 569
KD++ A+TGSGKTLA++LPAI
Sbjct: 106 KDVLASAKTGSGKTLAFLLPAI 127
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 34.3 bits (75), Expect = 0.078
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +3
Query: 504 KDLVGVAQTGSGKTLAYILPAIVHINNQPA 593
+D+ A TGSGKT+ Y+LP + + ++P+
Sbjct: 157 RDVAIAAPTGSGKTICYVLPVLAAVGSKPS 186
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 34.3 bits (75), Expect = 0.078
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
FE+ N + + GY +PTPIQ P+A++GK
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGK 186
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 504 KDLVGVAQTGSGKTLAYILPAIVHINNQP 590
KD+ A TG+GKT A++LP + + +P
Sbjct: 186 KDICACAATGTGKTAAFVLPILERMIYRP 214
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 385 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
P + F EAN + +Q+ V GY + TPIQ P+ G
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQG 378
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 507 DLVGVAQTGSGKTLAYILPAIVHI 578
D++ AQTGSGKT A++LP + +
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRL 403
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 385 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
P + F EAN + +Q+ V GY + TPIQ P+ G
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQG 378
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 507 DLVGVAQTGSGKTLAYILPAIVHI 578
D++ AQTGSGKT A++LP + +
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRL 403
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 385 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
P + F EAN + +Q+ V GY + TPIQ P+ G
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQG 378
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 507 DLVGVAQTGSGKTLAYILPAIVHI 578
D++ AQTGSGKT A++LP + +
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRL 403
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 33.1 bits (72), Expect = 0.18
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +3
Query: 504 KDLVGVAQTGSGKTLAYILPAIVHI 578
+D++G A+TGSGKTLA+ +P + +
Sbjct: 27 QDVLGAAETGSGKTLAFGIPLVARL 51
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 33.1 bits (72), Expect = 0.18
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +3
Query: 504 KDLVGVAQTGSGKTLAYILPAIVHI 578
+D++G A+TGSGKTLA+ +P + +
Sbjct: 194 QDVLGAAETGSGKTLAFGIPLVARL 218
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 415 PDYVQQGVKTMGYKEPTPIQAQGWPIAM 498
P+ V + ++ MG+ EPT IQ+ P A+
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAV 190
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 385 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA 519
P + F +++ P +++ V+ GY TPIQ P+ GK LA
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 504 KDLVGVAQTGSGKTLAYILP 563
KD++ AQTGSGKT A++LP
Sbjct: 336 KDILACAQTGSGKTAAFLLP 355
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 33.1 bits (72), Expect = 0.18
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 507 DLVGVAQTGSGKTLAYILPAIVHI 578
D+V A TGSGKTLA+++P ++ +
Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKL 798
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 33.1 bits (72), Expect = 0.18
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 507 DLVGVAQTGSGKTLAYILPAIVHI 578
D+V A TGSGKTLA+++P ++ +
Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKL 798
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 385 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA 519
P + F +++ P +++ V+ GY TPIQ P+ GK LA
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 504 KDLVGVAQTGSGKTLAYILP 563
KD++ AQTGSGKT A++LP
Sbjct: 336 KDILACAQTGSGKTAAFLLP 355
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +3
Query: 507 DLVGVAQTGSGKTLAYILPAIVHINNQP 590
D++G A+TG+GKTLA+ +P + ++ P
Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDP 155
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +3
Query: 507 DLVGVAQTGSGKTLAYILPAIVHINNQP 590
D++G A+TG+GKTLA+ +P + ++ P
Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDP 155
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 507 DLVGVAQTGSGKTLAYILPAIVHI 578
D++ AQTGSGKT A++LP + +
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARL 614
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
F EAN + +++ V GY + TPIQ P+ G
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQG 589
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 507 DLVGVAQTGSGKTLAYILPAIVHI 578
D++ AQTGSGKT A++LP + +
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARL 614
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
F EAN + +++ V GY + TPIQ P+ G
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQG 589
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 31.9 bits (69), Expect = 0.42
Identities = 11/22 (50%), Positives = 19/22 (86%)
Frame = +3
Query: 504 KDLVGVAQTGSGKTLAYILPAI 569
KD+V +++TGSGKT A+++P +
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPML 83
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 379 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
H +++ V + ++ G+ +PTPIQ + P M GK
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGK 62
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 31.9 bits (69), Expect = 0.42
Identities = 11/22 (50%), Positives = 19/22 (86%)
Frame = +3
Query: 504 KDLVGVAQTGSGKTLAYILPAI 569
KD+V +++TGSGKT A+++P +
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPML 83
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 379 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
H +++ V + ++ G+ +PTPIQ + P M GK
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGK 62
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 507 DLVGVAQTGSGKTLAYILPAIVHI 578
D++ AQTGSGKT A++LP + +
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARL 614
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
F EAN + +++ V GY + TPIQ P+ G
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQG 589
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 31.5 bits (68), Expect = 0.55
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
Frame = +3
Query: 507 DLVGVAQTGSGKTLAYILPAIVHINN---QPA 593
D+V + TGSGKTLA++LP + I N QPA
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPA 79
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 30.7 bits (66), Expect = 0.96
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +2
Query: 614 PIALVLAPTRELAQQI 661
P+AL+LAPTRELA QI
Sbjct: 460 PLALILAPTRELAAQI 475
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 30.7 bits (66), Expect = 0.96
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = -3
Query: 271 KVGVKQIPIWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 92
++G K ++ +H + + P + + KSI + E S G T ++
Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698
Query: 91 IPITRHDYFSDLVEDVYLNYGFFLTQ 14
P+TRH+ + + E +Y G+ L Q
Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGLNQ 723
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 30.7 bits (66), Expect = 0.96
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = -3
Query: 271 KVGVKQIPIWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 92
++G K ++ +H + + P + + KSI + E S G T ++
Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706
Query: 91 IPITRHDYFSDLVEDVYLNYGFFLTQ 14
P+TRH+ + + E +Y G+ L Q
Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGLNQ 731
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 30.7 bits (66), Expect = 0.96
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = -3
Query: 271 KVGVKQIPIWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 92
++G K ++ +H + + P + + KSI + E S G T ++
Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706
Query: 91 IPITRHDYFSDLVEDVYLNYGFFLTQ 14
P+TRH+ + + E +Y G+ L Q
Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGLNQ 731
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 30.7 bits (66), Expect = 0.96
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = -3
Query: 271 KVGVKQIPIWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 92
++G K ++ +H + + P + + KSI + E S G T ++
Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698
Query: 91 IPITRHDYFSDLVEDVYLNYGFFLTQ 14
P+TRH+ + + E +Y G+ L Q
Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGLNQ 723
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/22 (50%), Positives = 19/22 (86%)
Frame = +3
Query: 504 KDLVGVAQTGSGKTLAYILPAI 569
K+++G A+TGSGKT A+++P +
Sbjct: 127 KNIMGRARTGSGKTGAFLIPLV 148
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 13 PASERIHSLNKHLQLNPKNNHVW 81
PAS ++H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>AC024776-17|ABN43080.1| 365|Caenorhabditis elegans Hypothetical
protein Y41D4B.27 protein.
Length = 365
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -1
Query: 582 YLCAQWLARCRPTFCRNPFGLRQLNLSRHSYRPALSLDGRRFFVTH 445
YL WL+ C P F P + L L R+ Y + L+G F H
Sbjct: 156 YLVGDWLSHCFPEFAAFPVDQKDL-LHRNFYLQFVVLEGGFFSCNH 200
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 99 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 215
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 504 KDLVGVAQTGSGKTLAYILPAIVHI 578
++++ A TGSGKTLA+ LP I I
Sbjct: 164 RNVLASAPTGSGKTLAFALPVIDEI 188
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 154 RRIIAEFVASSKFGTTVSTAIIPI 83
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 154 RRIIAEFVASSKFGTTVSTAIIPI 83
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 528 TGSGKTLAYILPAIVH 575
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 620 ALVLAPTRELAQQI 661
ALV+APTRELAQQI
Sbjct: 100 ALVMAPTRELAQQI 113
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 620 ALVLAPTRELAQQI 661
ALV+APTRELAQQI
Sbjct: 100 ALVMAPTRELAQQI 113
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 292 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 450
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 292 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 450
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 504 KDLVGVAQTGSGKTLAYILPAIV 572
+D V + TG GK+L Y LPA++
Sbjct: 102 EDAVVILSTGGGKSLCYQLPALL 124
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 504 KDLVGVAQTGSGKTLAYILPAIV 572
+D V + TG GK+L Y LPA++
Sbjct: 125 EDAVVILSTGGGKSLCYQLPALL 147
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,905,069
Number of Sequences: 27780
Number of extensions: 327295
Number of successful extensions: 1099
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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