Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1125
         (597 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80454-4|AAB37876.3|  896|Caenorhabditis elegans Prion-like-(q/n...    30   1.4  
U23517-11|AAY44017.1|  288|Caenorhabditis elegans Hypothetical p...    29   3.3  
Z98877-14|CAD56615.1|  338|Caenorhabditis elegans Hypothetical p...    28   5.8  
Z74033-2|CAA98476.2|  419|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z74033-1|CAA98475.2|  460|Caenorhabditis elegans Hypothetical pr...    28   5.8  
U23515-13|AAK21453.1|  823|Caenorhabditis elegans Hypothetical p...    27   7.7  
AF039710-10|AAB96693.2|  393|Caenorhabditis elegans Hypothetical...    27   7.7  
AC024791-31|AAF60655.1|  181|Caenorhabditis elegans Hypothetical...    27   7.7  

>U80454-4|AAB37876.3|  896|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 66
           protein.
          Length = 896

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +2

Query: 446 GQPAETPSCWGLGFAIIPHKREFLVSASHKLALITSLPFVHT 571
           G P++  + W  G+ I+P   E L  +   +A I+SL F H+
Sbjct: 381 GLPSKPRNFWSGGWVILPLMLELLYCSLFTIATISSLRFFHS 422


>U23517-11|AAY44017.1|  288|Caenorhabditis elegans Hypothetical
           protein D1022.9 protein.
          Length = 288

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 65  QEWSLRLNLTQHGKSHQARTPEGLTD*QLFLD 160
           Q W L L    H K + ARTP  + D ++F++
Sbjct: 59  QYWPLMLARFSHEKPYVARTPAAIADAEMFIN 90


>Z98877-14|CAD56615.1|  338|Caenorhabditis elegans Hypothetical
           protein Y69H2.14 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 6/38 (15%)
 Frame = -3

Query: 496 DNCKPQSPARRSFSGLPGPLGQ----GE--HADSFSVA 401
           ++C+  +PAR+   G PGP GQ    GE  H+D+ S A
Sbjct: 190 NDCQTCAPARQGAPGPPGPAGQPGQPGEPGHSDTSSTA 227


>Z74033-2|CAA98476.2|  419|Caenorhabditis elegans Hypothetical
           protein F38B7.1b protein.
          Length = 419

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -1

Query: 255 SLFSRLESRSLPELTRQIAP-PTKNGHAPPP 166
           S+   L S S P  T Q+ P  T NG APPP
Sbjct: 122 SIGQNLVSASSPYSTPQLTPMATPNGQAPPP 152


>Z74033-1|CAA98475.2|  460|Caenorhabditis elegans Hypothetical
           protein F38B7.1a protein.
          Length = 460

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -1

Query: 255 SLFSRLESRSLPELTRQIAP-PTKNGHAPPP 166
           S+   L S S P  T Q+ P  T NG APPP
Sbjct: 163 SIGQNLVSASSPYSTPQLTPMATPNGQAPPP 193


>U23515-13|AAK21453.1|  823|Caenorhabditis elegans Hypothetical
           protein R144.2a protein.
          Length = 823

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 62  HQEWSLRLNLTQHGKSHQARTP 127
           H +W ++ NL +HG ++ A  P
Sbjct: 696 HMDWHVKQNLARHGSNNSAAVP 717


>AF039710-10|AAB96693.2|  393|Caenorhabditis elegans Hypothetical
           protein C46E10.9 protein.
          Length = 393

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 22/53 (41%), Positives = 28/53 (52%)
 Frame = +1

Query: 145 TALS*FGGWWCMAVLSWWSDLSG*FR*RSRL*PAK*ARYLGVRGLVSRNSLTT 303
           +AL+   GW  ++V S  S  SG F  RSRL   K   Y+ +  L S  SLTT
Sbjct: 33  SALASANGWPQLSVDSQSSGTSG-FPTRSRLFEEKPLTYINIDSLPSSFSLTT 84


>AC024791-31|AAF60655.1|  181|Caenorhabditis elegans Hypothetical
           protein Y47G6A.3 protein.
          Length = 181

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 73  EPAA*FDSTREISPGPDTGRIDRL 144
           EP+A FD+  ++ PG    RIDR+
Sbjct: 100 EPSALFDNANDLLPGQKEERIDRM 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,854,118
Number of Sequences: 27780
Number of extensions: 329587
Number of successful extensions: 907
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)