Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1124
         (675 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   7.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.0  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.2  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   9.2  

>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 468 LKNR*SWNQAMRMSCGSGSTTKADYNH 548
           +KN+ SW Q ++         K+ YNH
Sbjct: 90  IKNKPSWWQELQEKYDPKGEYKSRYNH 116


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 13/56 (23%), Positives = 21/56 (37%)
 Frame = +2

Query: 359  KKPVPKAENPQPSVDLSFFQSPPQNLKRTIEVIEHEIEKQVILESSDEDELWKWLY 526
            K   P   +P  S   +F +     +K  +E    E  +  + + SDE     W Y
Sbjct: 1121 KMQYPDLRSPAVSNVTTFMEGSKATVKNNVEDNYMEAPQDNVSQPSDEVMENSWFY 1176


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 13/56 (23%), Positives = 21/56 (37%)
 Frame = +2

Query: 359  KKPVPKAENPQPSVDLSFFQSPPQNLKRTIEVIEHEIEKQVILESSDEDELWKWLY 526
            K   P   +P  S   +F +     +K  +E    E  +  + + SDE     W Y
Sbjct: 1121 KMQYPDLRSPAVSNVTTFMEGSKATVKNNVEDNYMEAPQDNVSQPSDEVMENSWFY 1176


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +2

Query: 347 NTAAKKPVPKAENPQPSVD 403
           +T    P P   NPQ  VD
Sbjct: 452 STTEAPPAPAVSNPQNEVD 470


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 138 PCFSCELKQNKTSHELNIIANVNLI 64
           P F  +LK       LNII+N++ +
Sbjct: 369 PLFLTQLKDECPEVRLNIISNLDCV 393


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,303
Number of Sequences: 336
Number of extensions: 3894
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)