Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1124
(675 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 29 0.61
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 29 0.61
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 1.9
SPBC31F10.05 |mug37||sequence orphan|Schizosaccharomyces pombe|c... 27 2.5
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 2.5
SPBC146.04 |||sulfhydryl oxidase |Schizosaccharomyces pombe|chr ... 27 3.3
SPAC12B10.05 |||metallopeptidase|Schizosaccharomyces pombe|chr 1... 27 3.3
SPAPYUG7.06 |mug67||PPPDE peptidase family |Schizosaccharomyces ... 26 4.3
SPBC29A10.05 |exo1|mut2|exonuclease I Exo1|Schizosaccharomyces p... 26 4.3
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 26 5.7
SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr 3|||M... 26 5.7
SPBC1711.13 |his2||histidinol dehydrogenase His2 |Schizosaccharo... 25 7.6
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 25 7.6
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 25 7.6
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 25 10.0
SPBC543.03c |pku80||Ku domain protein Pku80|Schizosaccharomyces ... 25 10.0
SPBC660.14 |mik1||mitotic inhibitor kinase Mik1|Schizosaccharomy... 25 10.0
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 25 10.0
SPAC31A2.11c |cuf1||Cu metalloregulatory transcription factor Cu... 25 10.0
SPCC285.05 |||purine nucleoside transporter |Schizosaccharomyces... 25 10.0
SPAC3C7.12 |tip1|noc1|CLIP170 family protein Tip1|Schizosaccharo... 25 10.0
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 25 10.0
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 29.1 bits (62), Expect = 0.61
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2
Query: 323 KESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRTI 448
K SPP N+ A+KPVP+ N S +L +SP N K ++
Sbjct: 188 KNSPP--NSRTARKPVPRRAN-SASHNLGSTKSPNGNAKESL 226
Score = 26.6 bits (56), Expect = 3.3
Identities = 16/64 (25%), Positives = 27/64 (42%)
Frame = +2
Query: 182 NAALCRRNTDQEKRK*PKCSSDYRNAPRSTVRRYWRTSADSNTKIIQKESPPANNNTAAK 361
N+ L R+N+ Q K SS + T +++ ++SPP +TA
Sbjct: 45 NSFLSRKNSSQIKSPSDYKSSAHEQRVNHTTDSMAHVPGNNSPLQTPQKSPPRQKHTAPA 104
Query: 362 KPVP 373
P+P
Sbjct: 105 TPIP 108
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 29.1 bits (62), Expect = 0.61
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 242 SDYRNAPRSTVRRYWRTSADSNTKIIQKESPPANNNTAAKKPVPKAENP 388
S+ R++ RST R R++ S + + P NNT P P E P
Sbjct: 202 SNSRSSARSTARSAPRSTQRSRSSSANPVTTPPVNNTLLTPPAPPVELP 250
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 27.5 bits (58), Expect = 1.9
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 290 TSADSNTKIIQKESPPANNNTAAKKPVPKAENPQPS 397
TSA S+ I K S P NN + VP P P+
Sbjct: 1068 TSAASSPSNISKPSAPVANNVSKPSAVPPPPPPPPA 1103
>SPBC31F10.05 |mug37||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 217
Score = 27.1 bits (57), Expect = 2.5
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +2
Query: 401 DLSFFQSPPQNLKRTIEVIEH--EIEKQVILESSDEDELW 514
++S + P + R + ++ H +I K + + SSD DELW
Sbjct: 167 EISPLLTKPATMIRVVGIVSHAEKILKVIHIASSDLDELW 206
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.1 bits (57), Expect = 2.5
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 526 PPKPTITIESSDEDELEVIQSPSPAKES*PNLSLEKDVCQPVQY 657
PPK + + + ++ Q+PSP +E P L E QP +Y
Sbjct: 479 PPKDSSSTSTQPTEQSNAQQAPSPKEEERP-LPSEPSQNQPAEY 521
>SPBC146.04 |||sulfhydryl oxidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 3.3
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -3
Query: 433 ILGRRLEKG*VNRRLGILSFWYWFFGCSIVVGRWRLFL 320
IL RR++ + L ILSF W F +V WRLF+
Sbjct: 2 ILNRRIQV--ILPTLLILSFIIWIFHSVMVDKDWRLFM 37
>SPAC12B10.05 |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 486
Score = 26.6 bits (56), Expect = 3.3
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2
Query: 527 GRATSTTHPHRLIPG 483
G+AT +THPH L PG
Sbjct: 42 GQATDSTHPHILQPG 56
>SPAPYUG7.06 |mug67||PPPDE peptidase family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 201
Score = 26.2 bits (55), Expect = 4.3
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 293 SADSNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLS 409
S+DS++ + +E+ + + A K +PK P PS DL+
Sbjct: 156 SSDSSSDV-DEETLIVSKSKKAHKDIPKFSAPPPSADLN 193
>SPBC29A10.05 |exo1|mut2|exonuclease I Exo1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 571
Score = 26.2 bits (55), Expect = 4.3
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +2
Query: 260 PRSTVRRYWRTSADSNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSP 424
PR+ V +Y++ ++ K I ++ P +NNT + +PQ +Q+P
Sbjct: 448 PRTGVSKYFKLQKNTE-KEIDEQVPSQSNNTTPTSAKSDSASPQNWFSSFSYQTP 501
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 25.8 bits (54), Expect = 5.7
Identities = 17/69 (24%), Positives = 27/69 (39%)
Frame = +2
Query: 299 DSNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRTIEVIEHEIEKQ 478
DSNT + S P ++ KP ++ NP F S P++ T I +
Sbjct: 311 DSNTPKFKSSSKPVKSSFVFTKPEAESSNP---FSFDFGSSGPKSRSDTRNNIRTPLWTS 367
Query: 479 VILESSDED 505
+ E + D
Sbjct: 368 SVFEKPESD 376
>SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 535
Score = 25.8 bits (54), Expect = 5.7
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Frame = +2
Query: 320 QKESPPANNNTAAKKPVPKAENPQPSVDL-SFFQSPPQNLKRTI----EVIEHEIEKQVI 484
++ + P ++ + P P AEN QPSV +SP +L + I V+ +
Sbjct: 321 KEPAKPVPQPSSNEPPAPSAENKQPSVSSPEKKESPATHLLKVIGSSPYVVHSNHTNNTL 380
Query: 485 LESSDEDELWKWLY 526
+ D K LY
Sbjct: 381 TDKESSDPTEKCLY 394
>SPBC1711.13 |his2||histidinol dehydrogenase His2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 25.4 bits (53), Expect = 7.6
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +2
Query: 452 VIEHEIEKQVILESSDEDELWKW 520
+I+H I+K VI++ + D+ ++W
Sbjct: 306 IIKHAIKKSVIVQVDNVDQAFEW 328
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 354 QPKNQYQKLRIPSLLLTYPFSN 419
QP NQ+Q ++PS L T P S+
Sbjct: 263 QPSNQFQTQKLPSGLDTRPVSS 284
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.4 bits (53), Expect = 7.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 376 FWYWFFGCSIVVGRWRLFL 320
F WFFGC+++ G +LFL
Sbjct: 1950 FMCWFFGCTLISGP-QLFL 1967
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 25.0 bits (52), Expect = 10.0
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 266 CAGHFDNLSCIL 231
C GHF+N+SC L
Sbjct: 252 CRGHFNNVSCCL 263
>SPBC543.03c |pku80||Ku domain protein Pku80|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 695
Score = 25.0 bits (52), Expect = 10.0
Identities = 8/22 (36%), Positives = 17/22 (77%)
Frame = +2
Query: 371 PKAENPQPSVDLSFFQSPPQNL 436
P+ + PQP++ L+ + +PP++L
Sbjct: 500 PEGDLPQPNIYLTRYTNPPKSL 521
>SPBC660.14 |mik1||mitotic inhibitor kinase Mik1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 581
Score = 25.0 bits (52), Expect = 10.0
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 205 HRPRKTKITKMQLRLSKCPAQHCSSLLAHQCR 300
H P K K TK++L+ + P +SLLA +C+
Sbjct: 158 HTPCK-KGTKIKLKPPQSPLSPTTSLLARKCK 188
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 25.0 bits (52), Expect = 10.0
Identities = 16/74 (21%), Positives = 36/74 (48%)
Frame = +2
Query: 287 RTSADSNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRTIEVIEHE 466
RT+ S I K+SP A+ + AK + P+P+ + S Q+ +++++ +
Sbjct: 820 RTTERSTFSEIMKDSPSAHASPGAKTSPNASRAPEPTGGTN---SISQDTTQSLQMQSNS 876
Query: 467 IEKQVILESSDEDE 508
+ ++++S E
Sbjct: 877 VNSSSMVDASKSKE 890
>SPAC31A2.11c |cuf1||Cu metalloregulatory transcription factor Cuf1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.0 bits (52), Expect = 10.0
Identities = 11/47 (23%), Positives = 20/47 (42%)
Frame = +2
Query: 311 KIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRTIE 451
K+ + P N N K P + N P + ++ SP +++ E
Sbjct: 174 KLTSNVAYPPNYNNYLKSPYQQPTNFPPEIQYNYSHSPQHSIQEAEE 220
>SPCC285.05 |||purine nucleoside transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 348
Score = 25.0 bits (52), Expect = 10.0
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 413 FQSPPQNLKRTIEVIEHEIEKQVILESSDEDELWKWLYHQS 535
+Q+ L T+ EI K V+LE +++ ++ LY++S
Sbjct: 181 YQTNLYELNNTLITAAMEIIKDVVLEDNEKAASYRKLYNES 221
>SPAC3C7.12 |tip1|noc1|CLIP170 family protein
Tip1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 25.0 bits (52), Expect = 10.0
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 386 PQPSVD-LSFFQSPPQNLKRTIEVIEHEIEKQVILESSDEDEL 511
P PS + LS + + +NL I +EH IE+ I D + +
Sbjct: 368 PVPSDEKLSNYAAEKENLVSRISELEHTIEQLTINNERDNERM 410
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 25.0 bits (52), Expect = 10.0
Identities = 17/78 (21%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 269 TVRRYWRTSADSNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRTI 448
T+R +++ N ++ ++ + + P + E P+PSVD S +++K +
Sbjct: 238 TLREFFQKIGFKNDNQLENKAISEEEANSTEPPNVEKEEPKPSVDRSTGIVNSEDIKE-L 296
Query: 449 EVIEHEIE-KQVILESSD 499
V + +E K++ E+ D
Sbjct: 297 SVEDDSLELKEITPEALD 314
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,888,954
Number of Sequences: 5004
Number of extensions: 61975
Number of successful extensions: 245
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -