Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1124
(675 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 33 0.25
AF000299-7|AAC47982.1| 168|Caenorhabditis elegans Hypothetical ... 31 0.99
AF099915-7|AAU05581.1| 468|Caenorhabditis elegans Hypothetical ... 30 1.7
AF099915-6|AAU05582.1| 471|Caenorhabditis elegans Hypothetical ... 30 1.7
U29244-10|AAC71091.2| 908|Caenorhabditis elegans Hypothetical p... 29 2.3
AF016420-6|AAB65311.3| 530|Caenorhabditis elegans Udp-glucurono... 29 2.3
Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical p... 29 3.0
AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc ... 29 3.0
Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical pr... 29 4.0
U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short for... 29 4.0
U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form... 29 4.0
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr... 29 4.0
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ... 29 4.0
Z82083-4|CAB04972.1| 371|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z49911-10|CAA90134.1| 471|Caenorhabditis elegans Hypothetical p... 28 7.0
Z49909-18|CAA90117.1| 471|Caenorhabditis elegans Hypothetical p... 28 7.0
AF047658-3|ABC71828.1| 315|Caenorhabditis elegans Hypothetical ... 28 7.0
Z72506-3|CAA96617.1| 310|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z70287-7|CAA94303.2| 198|Caenorhabditis elegans Hypothetical pr... 27 9.2
U55368-4|AAA97991.1| 181|Caenorhabditis elegans Hypothetical pr... 27 9.2
U55368-1|AAA97989.1| 168|Caenorhabditis elegans Hypothetical pr... 27 9.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 27 9.2
L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle position... 27 9.2
AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane... 27 9.2
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/71 (22%), Positives = 34/71 (47%)
Frame = +2
Query: 293 SADSNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRTIEVIEHEIE 472
S + T ++ PP ++ T + + P++D+SFF +PP+ ++ + +
Sbjct: 171 SLNLETLVLPPTKPPGDDVTTGSRGFLTPTHSTPALDMSFF-TPPRQMRTLADAVREAAP 229
Query: 473 KQVILESSDED 505
+VI E + D
Sbjct: 230 VEVIPEFVEPD 240
>AF000299-7|AAC47982.1| 168|Caenorhabditis elegans Hypothetical
protein E03H12.7 protein.
Length = 168
Score = 30.7 bits (66), Expect = 0.99
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Frame = +2
Query: 326 ESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRTIEVIEHEIEKQVIL------ 487
+SP + + AA KPV +++ P P F+ P ++ K+ ++ E+E++K+ +
Sbjct: 84 KSPAPDGDAAAAKPVDQSQKPFPK-----FEMPTESKKKK-KMAENEVDKKEKMKNGFYQ 137
Query: 488 ESSDEDE 508
E SDED+
Sbjct: 138 EKSDEDD 144
>AF099915-7|AAU05581.1| 468|Caenorhabditis elegans Hypothetical
protein E02H9.3a protein.
Length = 468
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Frame = +2
Query: 260 PRSTV--RRYWRTSADS-NTKII-------QKESPPANNNTAAKKPVPKAENPQPSVDLS 409
P STV +R+ R NTK++ QK+ PANNN A PK + + +
Sbjct: 233 PNSTVVGKRFQRPQTPKQNTKVVGSGFPSPQKQVTPANNNKVAGSGFPKPPKKEEKIVGT 292
Query: 410 FFQSPPQN 433
FQ P ++
Sbjct: 293 GFQPPKKD 300
>AF099915-6|AAU05582.1| 471|Caenorhabditis elegans Hypothetical
protein E02H9.3b protein.
Length = 471
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Frame = +2
Query: 260 PRSTV--RRYWRTSADS-NTKII-------QKESPPANNNTAAKKPVPKAENPQPSVDLS 409
P STV +R+ R NTK++ QK+ PANNN A PK + + +
Sbjct: 236 PNSTVVGKRFQRPQTPKQNTKVVGSGFPSPQKQVTPANNNKVAGSGFPKPPKKEEKIVGT 295
Query: 410 FFQSPPQN 433
FQ P ++
Sbjct: 296 GFQPPKKD 303
>U29244-10|AAC71091.2| 908|Caenorhabditis elegans Hypothetical
protein ZK1248.10 protein.
Length = 908
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/104 (20%), Positives = 44/104 (42%), Gaps = 11/104 (10%)
Frame = +2
Query: 233 KCSSD-----YRNAPRSTVRRYWRTSADSNTKIIQKESPPANNNTA------AKKPVPKA 379
+CSSD + A +ST +R W+ + + + S N+++ + PVP
Sbjct: 95 ECSSDKQRNEWMKALQSTRKRSWKATKSKSDSSLDISSLTGRNSSSVLEECSSPSPVPPP 154
Query: 380 ENPQPSVDLSFFQSPPQNLKRTIEVIEHEIEKQVILESSDEDEL 511
+P+P F + + + +V E ++E +D ++
Sbjct: 155 RSPKPKKRTQFLTEEETDAETSSDVPHSSEETAEVVEDTDNTKI 198
>AF016420-6|AAB65311.3| 530|Caenorhabditis elegans
Udp-glucuronosyltransferase protein7 protein.
Length = 530
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 248 YRNAPRSTVRRYWRTSADSN 307
YRN P+S+V +YW T+ +N
Sbjct: 84 YRNRPKSSVTKYWTTNQAAN 103
>Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical
protein M04B2.1 protein.
Length = 870
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +1
Query: 529 PKPTITIESSDEDELEVIQSPSPAKES 609
P I ++ D+DE++ I +P+PAK++
Sbjct: 199 PVECIELDDDDDDEIQEISTPAPAKKA 225
>Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical
protein F53F4.11 protein.
Length = 543
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = +2
Query: 335 PANNNTAAKKPVPKAENPQ--PSVDLSFFQSPPQNLKR---TIEVIEHEIEKQVILESSD 499
P AAK P KA Q PS D Q +K ++EV + E E + ESSD
Sbjct: 84 PVVKTPAAKTPAKKAPGVQTVPSSDEEEEDDELQVVKSVAPSVEVAKKEEENDTVEESSD 143
Query: 500 EDEL 511
++E+
Sbjct: 144 DEEI 147
>AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc
finger protein protein.
Length = 870
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +1
Query: 529 PKPTITIESSDEDELEVIQSPSPAKES 609
P I ++ D+DE++ I +P+PAK++
Sbjct: 199 PVECIELDDDDDDEIQEISTPAPAKKA 225
>Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical
protein F15C11.1 protein.
Length = 744
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = +2
Query: 266 STVRRYWRTSADSNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRT 445
S+VR+ S++ K+ + E PP + P PK ENP ++ + ++ P ++
Sbjct: 524 SSVRQDILESSEFEEKLKKLEEPPILEQQVSTTPNPKNENPLLAMQKMWAETEPPPPRQM 583
Query: 446 IEVIEHE 466
+ +H+
Sbjct: 584 PVLSKHQ 590
>U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short form
protein.
Length = 715
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = +2
Query: 266 STVRRYWRTSADSNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRT 445
S+VR+ S++ K+ + E PP + P PK ENP ++ + ++ P ++
Sbjct: 495 SSVRQDILESSEFEEKLKKLEEPPILEQQVSTTPNPKNENPLLAMQKMWAETEPPPPRQM 554
Query: 446 IEVIEHE 466
+ +H+
Sbjct: 555 PVLSKHQ 561
>U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form
protein.
Length = 744
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = +2
Query: 266 STVRRYWRTSADSNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRT 445
S+VR+ S++ K+ + E PP + P PK ENP ++ + ++ P ++
Sbjct: 524 SSVRQDILESSEFEEKLKKLEEPPILEQQVSTTPNPKNENPLLAMQKMWAETEPPPPRQM 583
Query: 446 IEVIEHE 466
+ +H+
Sbjct: 584 PVLSKHQ 590
>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical protein
C34E10.8 protein.
Length = 1024
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +2
Query: 290 TSADSNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRT 445
T++ S+ + + E PPA ++ PVP E + +D ++P + KRT
Sbjct: 875 TTSSSSAETVSGE-PPAKKSSDVSAPVPSPEKEKEKIDRP--KTPKSSTKRT 923
>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
protein Y38C9A.1 protein.
Length = 1484
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 508 VVEVALPPKPT-ITIESSDEDELEVIQSPSPAKES*PNLS 624
+V A P PT + SSD+DE++ I+ P PAK+ P+ S
Sbjct: 1098 IVAPAAPAAPTHYSPISSDDDEIQCIE-PPPAKKPAPSAS 1136
>Z82083-4|CAB04972.1| 371|Caenorhabditis elegans Hypothetical
protein ZK1010.6 protein.
Length = 371
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 308 CWNRHWCASNDEQCCAGHFDN 246
C N +C S + CC GH+ N
Sbjct: 55 CQNYGYCNSEKKVCCLGHYKN 75
>Z49911-10|CAA90134.1| 471|Caenorhabditis elegans Hypothetical
protein C14A4.13 protein.
Length = 471
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 302 SNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLS 409
S+ II+KE PP A KPV K P+P V +S
Sbjct: 367 SDDTIIEKEGPP-----PAPKPVSKPVPPKPGVTMS 397
>Z49909-18|CAA90117.1| 471|Caenorhabditis elegans Hypothetical
protein C14A4.13 protein.
Length = 471
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 302 SNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLS 409
S+ II+KE PP A KPV K P+P V +S
Sbjct: 367 SDDTIIEKEGPP-----PAPKPVSKPVPPKPGVTMS 397
>AF047658-3|ABC71828.1| 315|Caenorhabditis elegans Hypothetical
protein K03H6.4 protein.
Length = 315
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 486 WNQAMRMSCGSGSTTKAD 539
WN A R+ G G TT+AD
Sbjct: 61 WNSACRLHMGEGKTTRAD 78
>Z72506-3|CAA96617.1| 310|Caenorhabditis elegans Hypothetical
protein F07A5.2 protein.
Length = 310
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 293 SADSNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSP 424
S S+ K I K+SP + ++K +PK E+ P + ++P
Sbjct: 127 SPGSSRKSILKKSPMKKRRSLSRKSLPKKEHIPPVQKFAIIKNP 170
>Z70287-7|CAA94303.2| 198|Caenorhabditis elegans Hypothetical
protein R09E10.2 protein.
Length = 198
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 197 RRNTDQEKRK*PKCSSDYRNAPRSTVRRYWRTSADSNTKIIQKESPP 337
R N EK+K K SS+Y N RY R N K++ ++ P
Sbjct: 103 RENVPLEKKKKGKYSSEYANLLVEKPTRY-RLVPSKNVKVVPEDELP 148
>U55368-4|AAA97991.1| 181|Caenorhabditis elegans Hypothetical
protein T08H10.4 protein.
Length = 181
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Frame = +2
Query: 326 ESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRTIEVIEHEIEKQVIL------ 487
+SP + A KPV +++ P P F+ P ++ K+ ++ E+E++K+ +
Sbjct: 97 KSPVPDGGAADAKPVDQSQKPFPK-----FEMPTESKKKK-KMAENEVDKKEKMKNGFYQ 150
Query: 488 ESSDEDE 508
E SDED+
Sbjct: 151 EKSDEDD 157
>U55368-1|AAA97989.1| 168|Caenorhabditis elegans Hypothetical
protein T08H10.3 protein.
Length = 168
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Frame = +2
Query: 326 ESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRTIEVIEHEIEKQVIL------ 487
+SP + A KPV +++ P P F+ P ++ K+ ++ E+E++K+ +
Sbjct: 84 KSPVPDGGAADAKPVDQSQKPFPK-----FEMPTESKKKK-KMAENEVDKKEKMKNGFYQ 137
Query: 488 ESSDEDE 508
E SDED+
Sbjct: 138 EKSDEDD 144
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 293 SADSNTKIIQK-ESPPANNNTAAKKPVPKAENPQPSV 400
S D N ++ S P + +T A + VPK EN +P+V
Sbjct: 568 SIDQNAAVVSNGSSTPFSVSTHADQIVPKIENKRPAV 604
>L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle positioning
protein 4 protein.
Length = 2104
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 229 TKMQLRLSKCPAQHCSSLLAHQCRFQH*NNSERVATC 339
+K + + K P + C L+ ++C H NN ATC
Sbjct: 1104 SKDESPVPKLPGRSCKGLV-NECNIPHLNNCSHFATC 1139
>AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane
matrix receptor MUP-4 protein.
Length = 2104
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 229 TKMQLRLSKCPAQHCSSLLAHQCRFQH*NNSERVATC 339
+K + + K P + C L+ ++C H NN ATC
Sbjct: 1104 SKDESPVPKLPGRSCKGLV-NECNIPHLNNCSHFATC 1139
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,311,444
Number of Sequences: 27780
Number of extensions: 371749
Number of successful extensions: 1562
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1559
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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