BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1122 (457 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 3.6 AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 6.3 EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 8.4 DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 8.4 DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 8.4 AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 8.4 >DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. Length = 828 Score = 21.8 bits (44), Expect = 3.6 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 3/40 (7%) Frame = -1 Query: 301 KLFTSTEWKQKLIESFS---KARTMLSYCIICWQKWLNTV 191 KLF +WK ++ES + + RTM Y + W W+ ++ Sbjct: 444 KLFE--QWKS-ILESGTTTLQTRTMHPYDHLVWNSWMPSI 480 >AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. Length = 554 Score = 21.0 bits (42), Expect = 6.3 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = +1 Query: 67 AAPILTARSLAPYSKQSTASLP 132 A P+L + AP S+ S S+P Sbjct: 111 ANPLLAEKLAAPSSQASPTSIP 132 >EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. Length = 683 Score = 20.6 bits (41), Expect = 8.4 Identities = 11/40 (27%), Positives = 20/40 (50%) Frame = -3 Query: 197 YGESLEHYYYAKINLLDHCKIYGKEAVDCLLYGAKDRAVK 78 YG ++ Y +N+L + ++V+ LYG D V+ Sbjct: 346 YGNHVKLYTKQGLNVLGNIVQGNGDSVNVQLYGQLDLLVR 385 >DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine receptor alpha4subunit protein. Length = 569 Score = 20.6 bits (41), Expect = 8.4 Identities = 7/12 (58%), Positives = 8/12 (66%) Frame = +2 Query: 119 PLPCHKFCNDLT 154 PLP H C DL+ Sbjct: 443 PLPLHTECEDLS 454 >DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine receptor alpha4subunit protein. Length = 569 Score = 20.6 bits (41), Expect = 8.4 Identities = 7/12 (58%), Positives = 8/12 (66%) Frame = +2 Query: 119 PLPCHKFCNDLT 154 PLP H C DL+ Sbjct: 443 PLPLHTECEDLS 454 >AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. Length = 683 Score = 20.6 bits (41), Expect = 8.4 Identities = 11/40 (27%), Positives = 20/40 (50%) Frame = -3 Query: 197 YGESLEHYYYAKINLLDHCKIYGKEAVDCLLYGAKDRAVK 78 YG ++ Y +N+L + ++V+ LYG D V+ Sbjct: 346 YGNHVKLYTKQGLNVLGNIVQGNGDSVNVQLYGQLDLLVR 385 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 120,077 Number of Sequences: 438 Number of extensions: 2394 Number of successful extensions: 6 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6 length of database: 146,343 effective HSP length: 53 effective length of database: 123,129 effective search space used: 12066642 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
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