Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1120
(556 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L22959-1|AAA28870.1| 152|Drosophila melanogaster ribosomal prot... 130 9e-31
BT024929-1|ABE01159.1| 152|Drosophila melanogaster IP16603p pro... 130 9e-31
AE013599-2985|AAM68401.1| 152|Drosophila melanogaster CG8900-PB... 130 9e-31
AE013599-2984|AAF57491.1| 152|Drosophila melanogaster CG8900-PA... 130 9e-31
AY118434-1|AAM48463.1| 152|Drosophila melanogaster RH43343p pro... 127 9e-30
BT022499-1|AAY54915.1| 246|Drosophila melanogaster IP07925p pro... 73 2e-13
X95845-1|CAA65103.1| 398|Drosophila melanogaster tap protein. 29 3.2
AY119146-1|AAM51006.1| 398|Drosophila melanogaster RE52048p pro... 29 3.2
AF022883-1|AAC80572.1| 398|Drosophila melanogaster basic helix-... 29 3.2
AE014296-2893|AAF49352.1| 398|Drosophila melanogaster CG7659-PA... 29 3.2
AY071647-1|AAL49269.1| 213|Drosophila melanogaster RE70650p pro... 29 5.6
AE014296-128|AAF47406.1| 213|Drosophila melanogaster CG12015-PA... 29 5.6
AY069030-1|AAL39175.1| 433|Drosophila melanogaster GH01429p pro... 28 9.7
AE014297-2410|AAF55469.1| 433|Drosophila melanogaster CG7379-PA... 28 9.7
>L22959-1|AAA28870.1| 152|Drosophila melanogaster ribosomal protein
S18 protein.
Length = 152
Score = 130 bits (315), Expect = 9e-31
Identities = 61/69 (88%), Positives = 66/69 (95%)
Frame = +1
Query: 49 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 228
MSLVIP+KFQHILRIMNTNIDGKRKV AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1 MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60
Query: 229 EEEVEKIIT 255
EEEV+K++T
Sbjct: 61 EEEVDKVVT 69
Score = 123 bits (297), Expect = 1e-28
Identities = 53/62 (85%), Positives = 60/62 (96%)
Frame = +3
Query: 255 IMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGL 434
I+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HRG+RHYWGL
Sbjct: 70 IISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGL 129
Query: 435 RV 440
RV
Sbjct: 130 RV 131
>BT024929-1|ABE01159.1| 152|Drosophila melanogaster IP16603p
protein.
Length = 152
Score = 130 bits (315), Expect = 9e-31
Identities = 61/69 (88%), Positives = 66/69 (95%)
Frame = +1
Query: 49 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 228
MSLVIP+KFQHILRIMNTNIDGKRKV AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1 MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60
Query: 229 EEEVEKIIT 255
EEEV+K++T
Sbjct: 61 EEEVDKVVT 69
Score = 123 bits (297), Expect = 1e-28
Identities = 53/62 (85%), Positives = 60/62 (96%)
Frame = +3
Query: 255 IMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGL 434
I+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HRG+RHYWGL
Sbjct: 70 IISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGL 129
Query: 435 RV 440
RV
Sbjct: 130 RV 131
>AE013599-2985|AAM68401.1| 152|Drosophila melanogaster CG8900-PB,
isoform B protein.
Length = 152
Score = 130 bits (315), Expect = 9e-31
Identities = 61/69 (88%), Positives = 66/69 (95%)
Frame = +1
Query: 49 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 228
MSLVIP+KFQHILRIMNTNIDGKRKV AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1 MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60
Query: 229 EEEVEKIIT 255
EEEV+K++T
Sbjct: 61 EEEVDKVVT 69
Score = 123 bits (297), Expect = 1e-28
Identities = 53/62 (85%), Positives = 60/62 (96%)
Frame = +3
Query: 255 IMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGL 434
I+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HRG+RHYWGL
Sbjct: 70 IISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGL 129
Query: 435 RV 440
RV
Sbjct: 130 RV 131
>AE013599-2984|AAF57491.1| 152|Drosophila melanogaster CG8900-PA,
isoform A protein.
Length = 152
Score = 130 bits (315), Expect = 9e-31
Identities = 61/69 (88%), Positives = 66/69 (95%)
Frame = +1
Query: 49 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 228
MSLVIP+KFQHILRIMNTNIDGKRKV AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1 MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60
Query: 229 EEEVEKIIT 255
EEEV+K++T
Sbjct: 61 EEEVDKVVT 69
Score = 123 bits (297), Expect = 1e-28
Identities = 53/62 (85%), Positives = 60/62 (96%)
Frame = +3
Query: 255 IMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGL 434
I+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HRG+RHYWGL
Sbjct: 70 IISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGL 129
Query: 435 RV 440
RV
Sbjct: 130 RV 131
>AY118434-1|AAM48463.1| 152|Drosophila melanogaster RH43343p
protein.
Length = 152
Score = 127 bits (307), Expect = 9e-30
Identities = 60/69 (86%), Positives = 65/69 (94%)
Frame = +1
Query: 49 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 228
MSLVIP+KFQ ILRIMNTNIDGKRKV AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1 MSLVIPEKFQRILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60
Query: 229 EEEVEKIIT 255
EEEV+K++T
Sbjct: 61 EEEVDKVVT 69
Score = 123 bits (297), Expect = 1e-28
Identities = 53/62 (85%), Positives = 60/62 (96%)
Frame = +3
Query: 255 IMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGL 434
I+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HRG+RHYWGL
Sbjct: 70 IISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGL 129
Query: 435 RV 440
RV
Sbjct: 130 RV 131
>BT022499-1|AAY54915.1| 246|Drosophila melanogaster IP07925p
protein.
Length = 246
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = +1
Query: 145 IKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIIT 255
IKGVGRRYSNIVLKKAD+DL KRAGECTEEEV+K++T
Sbjct: 1 IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVT 37
>X95845-1|CAA65103.1| 398|Drosophila melanogaster tap protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +3
Query: 249 YHIMSNPRQYKIPDWFLNRQKDIVDGKY---SQLTSSNLDSKLRE 374
+H+ NP+Q P F + D+ G + + L S+NLDS + +
Sbjct: 317 HHLQPNPQQESSPQQFSQEKYDLFRGSFDAAANLHSTNLDSGIHQ 361
>AY119146-1|AAM51006.1| 398|Drosophila melanogaster RE52048p
protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +3
Query: 249 YHIMSNPRQYKIPDWFLNRQKDIVDGKY---SQLTSSNLDSKLRE 374
+H+ NP+Q P F + D+ G + + L S+NLDS + +
Sbjct: 317 HHLQPNPQQESSPQQFSQEKYDLFRGSFDAAANLHSTNLDSGIHQ 361
>AF022883-1|AAC80572.1| 398|Drosophila melanogaster basic
helix-loop-helix neuraltranscription factor BIPAROUS
protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +3
Query: 249 YHIMSNPRQYKIPDWFLNRQKDIVDGKY---SQLTSSNLDSKLRE 374
+H+ NP+Q P F + D+ G + + L S+NLDS + +
Sbjct: 317 HHLQPNPQQESSPQQFSQEKYDLFRGSFDAAANLHSTNLDSGIHQ 361
>AE014296-2893|AAF49352.1| 398|Drosophila melanogaster CG7659-PA
protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +3
Query: 249 YHIMSNPRQYKIPDWFLNRQKDIVDGKY---SQLTSSNLDSKLRE 374
+H+ NP+Q P F + D+ G + + L S+NLDS + +
Sbjct: 317 HHLQPNPQQESSPQQFSQEKYDLFRGSFDAAANLHSTNLDSGIHQ 361
>AY071647-1|AAL49269.1| 213|Drosophila melanogaster RE70650p
protein.
Length = 213
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 199 DLDKRAGECTEEEVEKIITSCRILGSIRYQT 291
DLD R E ++EEVE C L S Y+T
Sbjct: 125 DLDGREPEVSDEEVEAFCEQCHSLISATYKT 155
>AE014296-128|AAF47406.1| 213|Drosophila melanogaster CG12015-PA
protein.
Length = 213
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 199 DLDKRAGECTEEEVEKIITSCRILGSIRYQT 291
DLD R E ++EEVE C L S Y+T
Sbjct: 125 DLDGREPEVSDEEVEAFCEQCHSLISATYKT 155
>AY069030-1|AAL39175.1| 433|Drosophila melanogaster GH01429p
protein.
Length = 433
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 297 LNRQKDIVDGKYSQLTSSNLDSKLREDLER 386
+N ++I+DGK QL + + L+ED +R
Sbjct: 97 VNHMQEIIDGKLRQLDTDQQNLDLKEDRDR 126
>AE014297-2410|AAF55469.1| 433|Drosophila melanogaster CG7379-PA
protein.
Length = 433
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 297 LNRQKDIVDGKYSQLTSSNLDSKLREDLER 386
+N ++I+DGK QL + + L+ED +R
Sbjct: 97 VNHMQEIIDGKLRQLDTDQQNLDLKEDRDR 126
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,115,921
Number of Sequences: 53049
Number of extensions: 516103
Number of successful extensions: 1513
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1513
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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