Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1118
         (672 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    27   0.41 
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    25   2.9  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   2.9  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   6.6  
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    23   8.8  

>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 27.5 bits (58), Expect = 0.41
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -3

Query: 229 MPIHVFGALRLICTSMNVYWMVHSSLSRISQQAS-KQESKQVSVGKK 92
           + + V   L  ICT M + W V +++  I+   S K+ES+  + G+K
Sbjct: 854 LDLFVLACLIQICTMMGLPWFVAATVLSINHVNSLKKESETAAPGEK 900


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 15/29 (51%), Positives = 15/29 (51%)
 Frame = -1

Query: 606 IQSVSDGRSVSVSKSLTVSQSVCRYVQRN 520
           IQSVS    V VS SL  SQ    Y Q N
Sbjct: 288 IQSVSTVNKVVVSPSLVNSQKAMVYAQVN 316


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 15/29 (51%), Positives = 15/29 (51%)
 Frame = -1

Query: 606 IQSVSDGRSVSVSKSLTVSQSVCRYVQRN 520
           IQSVS    V VS SL  SQ    Y Q N
Sbjct: 288 IQSVSTVNKVVVSPSLVNSQKAMVYAQVN 316


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 159 AHCRGFHNKQANKKASKF-PWGRKIDTSEVV 70
           AH  G H +QA+++ S++ P G    +S VV
Sbjct: 461 AHASGSHQQQASQQQSQYWPHGSGGSSSAVV 491


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 224 DPRVWCATV 198
           DP+VWCA V
Sbjct: 323 DPKVWCAAV 331


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 722,462
Number of Sequences: 2352
Number of extensions: 14744
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)