Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1118
         (672 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z92812-7|CAB07281.2|  341|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z29094-6|CAD45581.1|  457|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z29094-5|CAA82336.1|  465|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AL032655-5|CAA21723.1|  360|Caenorhabditis elegans Hypothetical ...    28   6.9  
Z81136-5|CAB03460.2|  733|Caenorhabditis elegans Hypothetical pr...    27   9.2  

>Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical
           protein M02G9.1 protein.
          Length = 909

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -1

Query: 618 CQTVIQSVSDGRSVSVSKSLTVSQSVCRYVQRNCRFIC 505
           CQ V Q+V  G  VS +    V Q  CR   ++C+F C
Sbjct: 143 CQNVCQNVCQGACVSQNSPPAVCQQTCR---QSCQFGC 177


>Z92812-7|CAB07281.2|  341|Caenorhabditis elegans Hypothetical
           protein T03E6.8 protein.
          Length = 341

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 20/61 (32%), Positives = 28/61 (45%)
 Frame = -1

Query: 627 GIPCQTVIQSVSDGRSVSVSKSLTVSQSVCRYVQRNCRFICHCESCVC*VSIIVIQKVLL 448
           GI C T + SV     +       VS+     +QRN  FI   ++CVC   IIV   ++ 
Sbjct: 216 GICCFTGVSSVLTCLKIVYDSRKIVSRETLT-LQRNFTFILMYQACVCVALIIVPLAIVS 274

Query: 447 T 445
           T
Sbjct: 275 T 275


>Z29094-6|CAD45581.1|  457|Caenorhabditis elegans Hypothetical
           protein C07A9.7b protein.
          Length = 457

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -1

Query: 513 FICHCESCVC*VSIIVIQK 457
           FICHCESC    S+ V++K
Sbjct: 286 FICHCESCFKMKSLKVLEK 304


>Z29094-5|CAA82336.1|  465|Caenorhabditis elegans Hypothetical
           protein C07A9.7a protein.
          Length = 465

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -1

Query: 513 FICHCESCVC*VSIIVIQK 457
           FICHCESC    S+ V++K
Sbjct: 286 FICHCESCFKMKSLKVLEK 304


>AL032655-5|CAA21723.1|  360|Caenorhabditis elegans Hypothetical
           protein Y6B3B.10 protein.
          Length = 360

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -3

Query: 259 HGRKFIGNRQMPIH-VFGALRLICTSMNVYW 170
           +G  ++G +  P   + GA+ LI  +MNVYW
Sbjct: 278 YGAVYLGPQDAPFFPLLGAMLLIIFAMNVYW 308


>Z81136-5|CAB03460.2|  733|Caenorhabditis elegans Hypothetical
           protein W02B8.4 protein.
          Length = 733

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 391 LVALPSTSEVGSGLYSHWRD 332
           L++LP + E G+ L+ HW D
Sbjct: 69  LISLPISKEAGTELWQHWTD 88


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,687,366
Number of Sequences: 27780
Number of extensions: 328493
Number of successful extensions: 843
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)