Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1116
(635 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g30380.1 68416.m03835 expressed protein ; expression supporte... 75 5e-14
At4g31020.2 68417.m04406 expressed protein 73 1e-13
At4g31020.1 68417.m04405 expressed protein 73 1e-13
At1g32190.1 68414.m03959 expressed protein 73 2e-13
At3g01690.1 68416.m00101 expressed protein 71 9e-13
At5g14390.1 68418.m01681 expressed protein 69 2e-12
At1g13610.1 68414.m01597 expressed protein ; expression supporte... 69 2e-12
At5g38220.2 68418.m04607 expressed protein 69 3e-12
At5g38220.1 68418.m04608 expressed protein 69 3e-12
At2g24320.1 68415.m02907 hypothetical protein 67 8e-12
At4g24760.1 68417.m03545 expressed protein 66 2e-11
At1g66900.1 68414.m07603 expressed protein 64 7e-11
At5g20520.1 68418.m02438 expressed protein 34 0.091
At2g02400.1 68415.m00180 cinnamoyl-CoA reductase family similar ... 29 2.0
At1g25290.1 68414.m03139 rhomboid family protein contains PFAM d... 29 2.6
At3g53240.1 68416.m05868 leucine-rich repeat family protein cont... 29 3.4
At5g26260.1 68418.m03133 meprin and TRAF homology domain-contain... 28 6.0
At3g14520.1 68416.m01840 terpene synthase/cyclase family protein... 28 6.0
>At3g30380.1 68416.m03835 expressed protein ; expression supported
by MPSS
Length = 399
Score = 74.5 bits (175), Expect = 5e-14
Identities = 33/81 (40%), Positives = 49/81 (60%)
Frame = +1
Query: 295 EREKENIEGFYSRTTRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRIN 474
E KEN+E +T RGN++ +++ +P A T+L+SHGNA DLGQM + L +
Sbjct: 37 ENVKENVEVLKLKTKRGNQVVAAYIK-NPTASLTLLYSHGNAADLGQMFELFSELSLHLR 95
Query: 475 CNIFSYDYSGYV*VAGSPQKR 537
N+ YDYSGY +G P ++
Sbjct: 96 VNLIGYDYSGYGRSSGKPSEQ 116
Score = 56.4 bits (130), Expect = 1e-08
Identities = 21/41 (51%), Positives = 33/41 (80%)
Frame = +3
Query: 513 SGGKPSEKNLYADIDAAWQALRTRYGISPENIILYGQSIGT 635
S GKPSE+N Y+DI+A ++ L +YG+ +++ILYGQS+G+
Sbjct: 109 SSGKPSEQNTYSDIEAVYRCLEEKYGVKEQDVILYGQSVGS 149
>At4g31020.2 68417.m04406 expressed protein
Length = 294
Score = 73.3 bits (172), Expect = 1e-13
Identities = 36/76 (47%), Positives = 45/76 (59%)
Frame = +1
Query: 307 ENIEGFYSRTTRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIF 486
+N+E T GNK+ F R P ARFT+L+SHGNA DLGQM ++ L + NI
Sbjct: 42 KNVEVHQLTTKSGNKVVATFWR-HPFARFTLLYSHGNAADLGQMVELFIELRAHLRVNIM 100
Query: 487 SYDYSGYV*VAGSPQK 534
SYDYSGY G P +
Sbjct: 101 SYDYSGYGASTGKPSE 116
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/45 (57%), Positives = 31/45 (68%)
Frame = +3
Query: 501 GLCVSGGKPSEKNLYADIDAAWQALRTRYGISPENIILYGQSIGT 635
G S GKPSE N Y DI+A + LR+ YGI E IILYGQS+G+
Sbjct: 106 GYGASTGKPSEFNTYYDIEAVYSCLRSDYGIKQEEIILYGQSVGS 150
Score = 31.1 bits (67), Expect = 0.64
Identities = 16/24 (66%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Frame = +2
Query: 182 IAAKLAFLPPEP-TYAFT-PDETG 247
+AAK AF PPEP TY T DETG
Sbjct: 8 VAAKFAFFPPEPATYGVTKDDETG 31
>At4g31020.1 68417.m04405 expressed protein
Length = 294
Score = 73.3 bits (172), Expect = 1e-13
Identities = 36/76 (47%), Positives = 45/76 (59%)
Frame = +1
Query: 307 ENIEGFYSRTTRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIF 486
+N+E T GNK+ F R P ARFT+L+SHGNA DLGQM ++ L + NI
Sbjct: 42 KNVEVHQLTTKSGNKVVATFWR-HPFARFTLLYSHGNAADLGQMVELFIELRAHLRVNIM 100
Query: 487 SYDYSGYV*VAGSPQK 534
SYDYSGY G P +
Sbjct: 101 SYDYSGYGASTGKPSE 116
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/45 (57%), Positives = 31/45 (68%)
Frame = +3
Query: 501 GLCVSGGKPSEKNLYADIDAAWQALRTRYGISPENIILYGQSIGT 635
G S GKPSE N Y DI+A + LR+ YGI E IILYGQS+G+
Sbjct: 106 GYGASTGKPSEFNTYYDIEAVYSCLRSDYGIKQEEIILYGQSVGS 150
Score = 31.1 bits (67), Expect = 0.64
Identities = 16/24 (66%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Frame = +2
Query: 182 IAAKLAFLPPEP-TYAFT-PDETG 247
+AAK AF PPEP TY T DETG
Sbjct: 8 VAAKFAFFPPEPATYGVTKDDETG 31
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 72.5 bits (170), Expect = 2e-13
Identities = 31/68 (45%), Positives = 44/68 (64%)
Frame = +1
Query: 331 RTTRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIFSYDYSGYV 510
+T RGNK+ ++R +PNAR T+L+SHGNA DLGQ+ ++ L + N+ YDYSGY
Sbjct: 59 KTRRGNKVTAFYLR-NPNARLTLLYSHGNAADLGQLFDLFVQLKVNLRVNLMGYDYSGYG 117
Query: 511 *VAGSPQK 534
G P +
Sbjct: 118 ASTGKPSE 125
Score = 58.4 bits (135), Expect = 4e-09
Identities = 25/45 (55%), Positives = 35/45 (77%)
Frame = +3
Query: 501 GLCVSGGKPSEKNLYADIDAAWQALRTRYGISPENIILYGQSIGT 635
G S GKPSE + YADI+AA++ L+T YG+ E++ILYGQS+G+
Sbjct: 115 GYGASTGKPSEYDTYADIEAAYECLQTDYGVGQEDLILYGQSVGS 159
>At3g01690.1 68416.m00101 expressed protein
Length = 361
Score = 70.5 bits (165), Expect = 9e-13
Identities = 34/77 (44%), Positives = 46/77 (59%)
Frame = +1
Query: 304 KENIEGFYSRTTRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNI 483
+EN+E RT RG +I ++VR P A T+L+SHGNA DLGQM ++ L + N+
Sbjct: 41 RENVEIVKLRTRRGTEIVGMYVR-HPMATSTLLYSHGNAADLGQMYELFIELSIHLKVNL 99
Query: 484 FSYDYSGYV*VAGSPQK 534
YDYSGY G P +
Sbjct: 100 MGYDYSGYGQSTGKPSE 116
Score = 52.0 bits (119), Expect = 3e-07
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = +3
Query: 513 SGGKPSEKNLYADIDAAWQALRTRYGISPENIILYGQSIGT 635
S GKPSE N YADI+A ++ L +G E +ILYGQS+G+
Sbjct: 110 STGKPSEHNTYADIEAVYKCLEETFGSKQEGVILYGQSVGS 150
>At5g14390.1 68418.m01681 expressed protein
Length = 369
Score = 69.3 bits (162), Expect = 2e-12
Identities = 33/77 (42%), Positives = 45/77 (58%)
Frame = +1
Query: 304 KENIEGFYSRTTRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNI 483
+EN+E T RG +I ++VR P A T+L+SHGNA DLGQM ++ L + N+
Sbjct: 41 RENVEILKLPTRRGTEIVAMYVR-HPMATSTLLYSHGNAADLGQMYELFIELSIHLKVNL 99
Query: 484 FSYDYSGYV*VAGSPQK 534
YDYSGY G P +
Sbjct: 100 MGYDYSGYGQSTGKPSE 116
Score = 54.4 bits (125), Expect = 6e-08
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +3
Query: 513 SGGKPSEKNLYADIDAAWQALRTRYGISPENIILYGQSIGT 635
S GKPSE + YADI+AA++ L YG E+IILYGQS+G+
Sbjct: 110 STGKPSEHHTYADIEAAYKCLEETYGAKQEDIILYGQSVGS 150
>At1g13610.1 68414.m01597 expressed protein ; expression supported
by MPSS
Length = 351
Score = 69.3 bits (162), Expect = 2e-12
Identities = 35/77 (45%), Positives = 50/77 (64%)
Frame = +1
Query: 307 ENIEGFYSRTTRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIF 486
ENIE RT RGN+I ++V+ +P A+ T+LFSHGNA DL Q+ + L ++N N+
Sbjct: 39 ENIEVVKIRTKRGNEIVAMYVK-NPTAKLTVLFSHGNASDLAQI-FYILAELIQLNVNLM 96
Query: 487 SYDYSGYV*VAGSPQKR 537
YDYSGY +G P ++
Sbjct: 97 GYDYSGYGQSSGKPSEQ 113
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = +3
Query: 513 SGGKPSEKNLYADIDAAWQALRTRYGISPENIILYGQSIGT 635
S GKPSE++ YADI+AA+ LR YG E IILYGQS+G+
Sbjct: 106 SSGKPSEQDTYADIEAAYNWLRQTYGTKDERIILYGQSVGS 146
>At5g38220.2 68418.m04607 expressed protein
Length = 238
Score = 68.9 bits (161), Expect = 3e-12
Identities = 28/68 (41%), Positives = 45/68 (66%)
Frame = +1
Query: 304 KENIEGFYSRTTRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNI 483
+++++ +T RGN+I ++++ P A T+L+SHGNA DLGQM ++ L R+ N+
Sbjct: 39 RDDVDVLKLKTRRGNEIVAIYIK-HPKANGTLLYSHGNAADLGQMFELFIELSNRLRLNL 97
Query: 484 FSYDYSGY 507
YDYSGY
Sbjct: 98 MGYDYSGY 105
Score = 53.6 bits (123), Expect = 1e-07
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +3
Query: 513 SGGKPSEKNLYADIDAAWQALRTRYGISPENIILYGQSIGT 635
S GK SE N YADIDAA+ L+ YG+ + +ILYGQS+G+
Sbjct: 108 STGKASECNTYADIDAAYTCLKEHYGVKDDQLILYGQSVGS 148
>At5g38220.1 68418.m04608 expressed protein
Length = 336
Score = 68.9 bits (161), Expect = 3e-12
Identities = 28/68 (41%), Positives = 45/68 (66%)
Frame = +1
Query: 304 KENIEGFYSRTTRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNI 483
+++++ +T RGN+I ++++ P A T+L+SHGNA DLGQM ++ L R+ N+
Sbjct: 39 RDDVDVLKLKTRRGNEIVAIYIK-HPKANGTLLYSHGNAADLGQMFELFIELSNRLRLNL 97
Query: 484 FSYDYSGY 507
YDYSGY
Sbjct: 98 MGYDYSGY 105
Score = 53.6 bits (123), Expect = 1e-07
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +3
Query: 513 SGGKPSEKNLYADIDAAWQALRTRYGISPENIILYGQSIGT 635
S GK SE N YADIDAA+ L+ YG+ + +ILYGQS+G+
Sbjct: 108 STGKASECNTYADIDAAYTCLKEHYGVKDDQLILYGQSVGS 148
>At2g24320.1 68415.m02907 hypothetical protein
Length = 286
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/65 (49%), Positives = 40/65 (61%)
Frame = +1
Query: 334 TTRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIFSYDYSGYV* 513
T GNK+ F + P +RFT+L+SHGNA DLGQM ++ L + NI SYDYSGY
Sbjct: 43 TKSGNKVIATFWK-HPFSRFTLLYSHGNAADLGQMVDLFIELRAHLRVNIMSYDYSGYGA 101
Query: 514 VAGSP 528
G P
Sbjct: 102 STGKP 106
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +3
Query: 501 GLCVSGGKPSEKNLYADIDAAWQALRTRYGISPENIILYGQSIGT 635
G S GKP+E N Y DI+A + LRT YGI E +ILYGQS+G+
Sbjct: 98 GYGASTGKPTELNTYYDIEAVYNCLRTEYGIMQEEMILYGQSVGS 142
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 182 IAAKLAFLPPEPTYAFTPDETGSKFL 259
+AAK AF PP PTY DE K +
Sbjct: 1 MAAKFAFFPPPPTYDVGKDEETGKLM 26
>At4g24760.1 68417.m03545 expressed protein
Length = 365
Score = 66.1 bits (154), Expect = 2e-11
Identities = 30/78 (38%), Positives = 47/78 (60%)
Frame = +1
Query: 304 KENIEGFYSRTTRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNI 483
+EN++ T RG +I +++R P A T+L+SHGNA D+GQM ++ L + N+
Sbjct: 41 RENVDILRLPTRRGTEIVAMYIRY-PMAVTTLLYSHGNAADIGQMYELFIELSIHLRVNL 99
Query: 484 FSYDYSGYV*VAGSPQKR 537
YDYSGY +G P ++
Sbjct: 100 MGYDYSGYGQSSGKPTEQ 117
Score = 59.3 bits (137), Expect = 2e-09
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +3
Query: 513 SGGKPSEKNLYADIDAAWQALRTRYGISPENIILYGQSIGT 635
S GKP+E+N YADI+AA++ L YG ENIILYGQS+G+
Sbjct: 110 SSGKPTEQNTYADIEAAYKCLEENYGAKQENIILYGQSVGS 150
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +2
Query: 182 IAAKLAFLPPE-PTYAFTPDETGSKFL 259
+AAKLAF PP P+Y DET FL
Sbjct: 8 MAAKLAFFPPNPPSYKLVRDETTELFL 34
>At1g66900.1 68414.m07603 expressed protein
Length = 272
Score = 64.1 bits (149), Expect = 7e-11
Identities = 29/68 (42%), Positives = 44/68 (64%)
Frame = +1
Query: 304 KENIEGFYSRTTRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNI 483
+++++ RT GN+I ++V+ S A T+L+SHGNA DLGQM ++ L R+ N+
Sbjct: 42 RDDVDILKLRTRCGNEIVAVYVKHS-KANGTLLYSHGNAADLGQMFELFVELSNRLRVNL 100
Query: 484 FSYDYSGY 507
YDYSGY
Sbjct: 101 MGYDYSGY 108
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/41 (46%), Positives = 32/41 (78%)
Frame = +3
Query: 513 SGGKPSEKNLYADIDAAWQALRTRYGISPENIILYGQSIGT 635
S G+ SE N YADI+A+++ L+ +YG+ + +I+YGQS+G+
Sbjct: 111 STGQASECNTYADIEASYKCLKEKYGVKDDQLIVYGQSVGS 151
>At5g20520.1 68418.m02438 expressed protein
Length = 308
Score = 33.9 bits (74), Expect = 0.091
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 316 EGFYSRTTRGNKIACLFVRCSPNARF-TILFSHGNAVDLGQMSSFYLGLGTRINCNIFSY 492
E + +++ G ++ F++ P R TILF NA ++ + ++ CN+F
Sbjct: 55 EDIWLQSSDGVRLHAWFIKMFPECRGPTILFFQENAGNIAHRLEMVRIMIQKLKCNVFML 114
Query: 493 DYSGYV*VAGSPQKR 537
Y GY G P ++
Sbjct: 115 SYRGYGASEGYPSQQ 129
Score = 31.1 bits (67), Expect = 0.64
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 501 GLCVSGGKPSEKNLYADIDAAWQALRTRYGISPENIILYGQSIG 632
G S G PS++ + D AA L R I I+++G+S+G
Sbjct: 118 GYGASEGYPSQQGIIKDAQAALDHLSGRTDIDTSRIVVFGRSLG 161
>At2g02400.1 68415.m00180 cinnamoyl-CoA reductase family similar to
cinnamoyl-CoA reductase from Pinus taeda [GI:17978649],
Eucalyptus gunnii [GI:2058311]
Length = 318
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 253 ISLTLTERAEWQYSEREKENIEGFYSRTTRG 345
IS TL E+A W++SE+ NI + T G
Sbjct: 160 ISKTLAEKAAWEFSEKHGTNIVTIHPSTCLG 190
>At1g25290.1 68414.m03139 rhomboid family protein contains PFAM
domain PF01694, Rhomboid family
Length = 343
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 582 GFVTLATQHLCQHTSSFLRASRHL 511
GF T A+ H C H S LR HL
Sbjct: 23 GFATAASVHACHHVSRHLRLDFHL 46
>At3g53240.1 68416.m05868 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.1
[Lycopersicon pimpinellifolium] gi|1184075|gb|AAC15779
Length = 891
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 496 YSGYV*VAGSPQKRTCMLT*MLRGKRYEPD 585
Y G + GSP KR+C T + GK YE D
Sbjct: 804 YLGNFLLCGSPTKRSCGGTTISSGKEYEDD 833
>At5g26260.1 68418.m03133 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 351
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 528 SEKNLYADIDAAWQALRTRYGISPENIILYGQ 623
+ K LY+ AAW +R+ YG+ NIIL +
Sbjct: 292 NHKQLYS---AAWYPIRSDYGVGVNNIILMSE 320
>At3g14520.1 68416.m01840 terpene synthase/cyclase family protein
similar to terpene synthase GB:CAA72074 from
[Arabidopsis thaliana]
Length = 605
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -3
Query: 582 GFVTLATQHLCQHTSSFLRASRHLHITRIIITKYITVY 469
G V+ AT HL +H + L R+ +I ++ +YI+ Y
Sbjct: 233 GNVSGATPHLLKHIQNSLYIPRYCNIEVLVAREYISYY 270
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,503,478
Number of Sequences: 28952
Number of extensions: 271953
Number of successful extensions: 679
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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