Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1114
         (619 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4B823 Cluster: Putative uncharacterized protein; n=1; ...    34   3.1  
UniRef50_A0LLK2 Cluster: Putative uncharacterized protein precur...    33   4.1  
UniRef50_Q8TCG5 Cluster: Carnitine O-palmitoyltransferase I, bra...    33   4.1  
UniRef50_Q5NMF4 Cluster: Serine protease; n=1; Zymomonas mobilis...    33   5.5  
UniRef50_Q4S0T6 Cluster: Chromosome undetermined SCAF14779, whol...    33   7.2  
UniRef50_A5PLF6 Cluster: Putative uncharacterized protein; n=3; ...    33   7.2  
UniRef50_A4FEK1 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  

>UniRef50_A4B823 Cluster: Putative uncharacterized protein; n=1;
           Alteromonas macleodii 'Deep ecotype'|Rep: Putative
           uncharacterized protein - Alteromonas macleodii 'Deep
           ecotype'
          Length = 243

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = -2

Query: 309 PLCGGAVVQGVVICVPRGAAVYVVLQFWDMLYLLLRTLIVNNVIAQ 172
           PL  G  + GV +      +V+ V QF+ +L LL  T +VN+++ Q
Sbjct: 87  PLLTGLYMMGVFVARGVKTSVFTVFQFFPLLLLLALTQLVNSILVQ 132


>UniRef50_A0LLK2 Cluster: Putative uncharacterized protein
           precursor; n=1; Syntrophobacter fumaroxidans MPOB|Rep:
           Putative uncharacterized protein precursor -
           Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
          Length = 177

 Score = 33.5 bits (73), Expect = 4.1
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -2

Query: 366 LLIISIGGDTWRRVPPRPVPLCGGAVVQGVVICVPRGAAVYVV 238
           LLI  +    W  +PP       G V+  V++ +P GAA++VV
Sbjct: 22  LLIAGVAYGAWSGIPPTGFAHLFGYVIACVILAIPLGAALFVV 64


>UniRef50_Q8TCG5 Cluster: Carnitine O-palmitoyltransferase I, brain
           isoform; n=140; Eumetazoa|Rep: Carnitine
           O-palmitoyltransferase I, brain isoform - Homo sapiens
           (Human)
          Length = 803

 Score = 33.5 bits (73), Expect = 4.1
 Identities = 17/27 (62%), Positives = 18/27 (66%)
 Frame = +2

Query: 107 RFPRDFRTGVFSASVLKFYFLFCAITL 187
           RF  DF TGVF AS L + FLF AI L
Sbjct: 45  RFWNDFLTGVFPASPLSWLFLFSAIQL 71


>UniRef50_Q5NMF4 Cluster: Serine protease; n=1; Zymomonas
           mobilis|Rep: Serine protease - Zymomonas mobilis
          Length = 1066

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = +1

Query: 274 NNTLYHGTTTQGYGARGYTPPSVTSNGNYKQVSSKALFGSVASINDL 414
           N T YH  +  GYG  G      T   +Y++ S++ + G++AS+ND+
Sbjct: 191 NGTGYH-VSISGYGMSGIGSTGATEAIDYRRRSAENMLGALASMNDV 236


>UniRef50_Q4S0T6 Cluster: Chromosome undetermined SCAF14779, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF14779,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 771

 Score = 32.7 bits (71), Expect = 7.2
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = +3

Query: 180 SRCLQLRFGVKDTACPKTARQRTQLHHEGRK*QHPVPRHHHTGVRGE-GVHAAKCH 344
           S CLQ+R  V++ A  +T   + + H   +  +HP  + HH G RG+ GV AA  H
Sbjct: 442 SSCLQVR--VRELALRRTGGLQGR-HGRAQLHRHPAAQGHHRGNRGQPGVRAAAGH 494


>UniRef50_A5PLF6 Cluster: Putative uncharacterized protein; n=3;
           Clupeocephala|Rep: Putative uncharacterized protein -
           Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 575

 Score = 32.7 bits (71), Expect = 7.2
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 71  PIRAFFDNSLAVRFPRDFRTGVFSASVLKFYFLFCAI 181
           P+ A +  S  ++F  D +  V +A +  FYF FCA+
Sbjct: 92  PVSALYQLSQVLQFQLDLKETVTTAGISGFYFAFCAV 128


>UniRef50_A4FEK1 Cluster: Putative uncharacterized protein; n=1;
           Saccharopolyspora erythraea NRRL 2338|Rep: Putative
           uncharacterized protein - Saccharopolyspora erythraea
           (strain NRRL 23338)
          Length = 537

 Score = 32.7 bits (71), Expect = 7.2
 Identities = 19/59 (32%), Positives = 28/59 (47%)
 Frame = +1

Query: 238 DNVHSCTTRDANNNTLYHGTTTQGYGARGYTPPSVTSNGNYKQVSSKALFGSVASINDL 414
           D VH  T R++ N  L  G +  G GAR   PP     G  +Q+      GS  ++++L
Sbjct: 293 DAVHELTLRNSGNTEL-SGLSLTGDGARCGPPPVTLGPGERRQIRCSVRAGSGEAVSNL 350


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,893,436
Number of Sequences: 1657284
Number of extensions: 13367650
Number of successful extensions: 37755
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 36109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37723
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)