BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1114
(619 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC029104-1|AAH29104.1| 792|Homo sapiens CPT1C protein protein. 33 0.61
AF357970-2|AAL99615.1| 803|Homo sapiens carnitine palmitoyltran... 33 0.61
AF331918-1|AAQ14875.1| 803|Homo sapiens carnitine acyltransfera... 33 0.61
BC018905-1|AAH18905.1| 447|Homo sapiens F-box protein 5 protein. 31 3.3
AY079515-1|AAL86610.1| 447|Homo sapiens early mitotic inhibitor... 31 3.3
AL080276-3|CAI18895.1| 447|Homo sapiens F-box protein 5 protein. 31 3.3
AF129535-1|AAF04469.1| 447|Homo sapiens F-box protein Fbx5 prot... 31 3.3
X67334-1|CAA47749.1| 892|Homo sapiens polypeptide BM28 protein. 30 5.7
U76254-1|AAD00248.1| 381|Homo sapiens neuropeptide Y receptor t... 30 5.7
U50146-1|AAC51115.1| 381|Homo sapiens type 2 neuropeptide Y rec... 30 5.7
U42766-1|AAB04120.1| 381|Homo sapiens neuropeptide y2 receptor ... 30 5.7
U42389-1|AAB07760.1| 381|Homo sapiens neuropeptide y/peptide YY... 30 5.7
U36269-1|AAC50281.1| 381|Homo sapiens neuropeptide Y/peptide YY... 30 5.7
D83987-1|BAA12177.1| 895|Homo sapiens huMCM2 protein. 30 5.7
D21063-1|BAA04642.1| 914|Homo sapiens KIAA0030 protein. 30 5.7
BT009734-1|AAP88736.1| 895|Homo sapiens MCM2 minichromosome mai... 30 5.7
BC075053-1|AAH75053.2| 381|Homo sapiens neuropeptide Y receptor... 30 5.7
BC075052-1|AAH75052.2| 381|Homo sapiens neuropeptide Y receptor... 30 5.7
BC017490-1|AAH17490.2| 904|Homo sapiens minichromosome maintena... 30 5.7
BC017258-1|AAH17258.2| 904|Homo sapiens minichromosome maintena... 30 5.7
BC014272-1|AAH14272.2| 904|Homo sapiens minichromosome maintena... 30 5.7
BC007938-1|AAH07938.2| 904|Homo sapiens minichromosome maintena... 30 5.7
BC007670-1|AAH07670.2| 904|Homo sapiens minichromosome maintena... 30 5.7
BC006165-1|AAH06165.3| 904|Homo sapiens minichromosome maintena... 30 5.7
AY675259-1|AAT70723.1| 904|Homo sapiens MCM2 minichromosome mai... 30 5.7
AY236540-1|AAO92062.1| 381|Homo sapiens neuropeptide Y receptor... 30 5.7
AC104407-1|AAY40940.1| 381|Homo sapiens unknown protein. 30 5.7
U32500-1|AAA93170.1| 381|Homo sapiens type 2 neuropeptide Y rec... 30 7.5
AK127831-1|BAC87152.1| 187|Homo sapiens protein ( Homo sapiens ... 29 9.9
>BC029104-1|AAH29104.1| 792|Homo sapiens CPT1C protein protein.
Length = 792
Score = 33.5 bits (73), Expect = 0.61
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +2
Query: 107 RFPRDFRTGVFSASVLKFYFLFCAITL 187
RF DF TGVF AS L + FLF AI L
Sbjct: 45 RFWNDFLTGVFPASPLSWLFLFSAIQL 71
>AF357970-2|AAL99615.1| 803|Homo sapiens carnitine
palmitoyltransferase IC protein.
Length = 803
Score = 33.5 bits (73), Expect = 0.61
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +2
Query: 107 RFPRDFRTGVFSASVLKFYFLFCAITL 187
RF DF TGVF AS L + FLF AI L
Sbjct: 45 RFWNDFLTGVFPASPLSWLFLFSAIQL 71
>AF331918-1|AAQ14875.1| 803|Homo sapiens carnitine
acyltransferase-like protein 1 protein.
Length = 803
Score = 33.5 bits (73), Expect = 0.61
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +2
Query: 107 RFPRDFRTGVFSASVLKFYFLFCAITL 187
RF DF TGVF AS L + FLF AI L
Sbjct: 45 RFWNDFLTGVFPASPLSWLFLFSAIQL 71
>BC018905-1|AAH18905.1| 447|Homo sapiens F-box protein 5 protein.
Length = 447
Score = 31.1 bits (67), Expect = 3.3
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -1
Query: 277 CYLRPSWCSCVRCLAVLGHAVSFTPNLNCKQRDCT-KQKIKLQ-NTGRKYAGAKIARKSD 104
C LRP CSC + + A P+ +CK+ T K+K N ++G K+ + D
Sbjct: 8 CALRPPRCSCSASPSAVTAAGRPRPSDSCKEESSTLSVKMKCDFNCNHVHSGLKLVKPDD 67
Query: 103 S*RVV 89
R+V
Sbjct: 68 IGRLV 72
>AY079515-1|AAL86610.1| 447|Homo sapiens early mitotic inhibitor
protein.
Length = 447
Score = 31.1 bits (67), Expect = 3.3
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -1
Query: 277 CYLRPSWCSCVRCLAVLGHAVSFTPNLNCKQRDCT-KQKIKLQ-NTGRKYAGAKIARKSD 104
C LRP CSC + + A P+ +CK+ T K+K N ++G K+ + D
Sbjct: 8 CALRPPRCSCSASPSAVTAAGRPRPSDSCKEESSTLSVKMKCDFNCNHVHSGLKLVKPDD 67
Query: 103 S*RVV 89
R+V
Sbjct: 68 IGRLV 72
>AL080276-3|CAI18895.1| 447|Homo sapiens F-box protein 5 protein.
Length = 447
Score = 31.1 bits (67), Expect = 3.3
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -1
Query: 277 CYLRPSWCSCVRCLAVLGHAVSFTPNLNCKQRDCT-KQKIKLQ-NTGRKYAGAKIARKSD 104
C LRP CSC + + A P+ +CK+ T K+K N ++G K+ + D
Sbjct: 8 CALRPPRCSCSASPSAVTAAGRPRPSDSCKEESSTLSVKMKCDFNCNHVHSGLKLVKPDD 67
Query: 103 S*RVV 89
R+V
Sbjct: 68 IGRLV 72
>AF129535-1|AAF04469.1| 447|Homo sapiens F-box protein Fbx5
protein.
Length = 447
Score = 31.1 bits (67), Expect = 3.3
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -1
Query: 277 CYLRPSWCSCVRCLAVLGHAVSFTPNLNCKQRDCT-KQKIKLQ-NTGRKYAGAKIARKSD 104
C LRP CSC + + A P+ +CK+ T K+K N ++G K+ + D
Sbjct: 8 CALRPPRCSCSASPSAVTAAGRPRPSDSCKEESSTLSVKMKCDFNCNHVHSGLKLVKPDD 67
Query: 103 S*RVV 89
R+V
Sbjct: 68 IGRLV 72
>X67334-1|CAA47749.1| 892|Homo sapiens polypeptide BM28 protein.
Length = 892
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 378 SAIRQRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 506
S+ QRR P + GR+ TDALT S GR + + D ++
Sbjct: 3 SSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 45
>U76254-1|AAD00248.1| 381|Homo sapiens neuropeptide Y receptor type
2 protein.
Length = 381
Score = 30.3 bits (65), Expect = 5.7
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -3
Query: 365 CL*FPLEVTLGGVYPLAPYPCVVVPWYRVLLFASLVVQLCTLSCSFGTCCIFYSE 201
CL F L TL G + + P C +VP+ + L + L ++ C +++ E
Sbjct: 103 CLPFTLTYTLMGEWKMGPVLCHLVPYAQGLAVQVSTITLTVIALDRHRCIVYHLE 157
>U50146-1|AAC51115.1| 381|Homo sapiens type 2 neuropeptide Y
receptor protein.
Length = 381
Score = 30.3 bits (65), Expect = 5.7
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -3
Query: 365 CL*FPLEVTLGGVYPLAPYPCVVVPWYRVLLFASLVVQLCTLSCSFGTCCIFYSE 201
CL F L TL G + + P C +VP+ + L + L ++ C +++ E
Sbjct: 103 CLPFTLTYTLMGEWKMGPVLCHLVPYAQGLAVQVSTITLTVIALDRHRCIVYHLE 157
>U42766-1|AAB04120.1| 381|Homo sapiens neuropeptide y2 receptor
protein.
Length = 381
Score = 30.3 bits (65), Expect = 5.7
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -3
Query: 365 CL*FPLEVTLGGVYPLAPYPCVVVPWYRVLLFASLVVQLCTLSCSFGTCCIFYSE 201
CL F L TL G + + P C +VP+ + L + L ++ C +++ E
Sbjct: 103 CLPFTLTYTLMGEWKMGPVLCHLVPYAQGLAVQVSTITLTVIALDRHRCIVYHLE 157
>U42389-1|AAB07760.1| 381|Homo sapiens neuropeptide y/peptide YY
receptor type 2 protein.
Length = 381
Score = 30.3 bits (65), Expect = 5.7
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -3
Query: 365 CL*FPLEVTLGGVYPLAPYPCVVVPWYRVLLFASLVVQLCTLSCSFGTCCIFYSE 201
CL F L TL G + + P C +VP+ + L + L ++ C +++ E
Sbjct: 103 CLPFTLTYTLMGEWKMGPVLCHLVPYAQGLAVQVSTITLTVIALDRHRCIVYHLE 157
>U36269-1|AAC50281.1| 381|Homo sapiens neuropeptide Y/peptide YY Y2
receptor protein.
Length = 381
Score = 30.3 bits (65), Expect = 5.7
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -3
Query: 365 CL*FPLEVTLGGVYPLAPYPCVVVPWYRVLLFASLVVQLCTLSCSFGTCCIFYSE 201
CL F L TL G + + P C +VP+ + L + L ++ C +++ E
Sbjct: 103 CLPFTLTYTLMGEWKMGPVLCHLVPYAQGLAVQVSTITLTVIALDRHRCIVYHLE 157
>D83987-1|BAA12177.1| 895|Homo sapiens huMCM2 protein.
Length = 895
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 378 SAIRQRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 506
S+ QRR P + GR+ TDALT S GR + + D ++
Sbjct: 3 SSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 45
>D21063-1|BAA04642.1| 914|Homo sapiens KIAA0030 protein.
Length = 914
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 378 SAIRQRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 506
S+ QRR P + GR+ TDALT S GR + + D ++
Sbjct: 22 SSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 64
>BT009734-1|AAP88736.1| 895|Homo sapiens MCM2 minichromosome
maintenance deficient 2, mitotin (S. cerevisiae)
protein.
Length = 895
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 378 SAIRQRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 506
S+ QRR P + GR+ TDALT S GR + + D ++
Sbjct: 3 SSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 45
>BC075053-1|AAH75053.2| 381|Homo sapiens neuropeptide Y receptor Y2
protein.
Length = 381
Score = 30.3 bits (65), Expect = 5.7
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -3
Query: 365 CL*FPLEVTLGGVYPLAPYPCVVVPWYRVLLFASLVVQLCTLSCSFGTCCIFYSE 201
CL F L TL G + + P C +VP+ + L + L ++ C +++ E
Sbjct: 103 CLPFTLTYTLMGEWKMGPVLCHLVPYAQGLAVQVSTITLTVIALDRHRCIVYHLE 157
>BC075052-1|AAH75052.2| 381|Homo sapiens neuropeptide Y receptor Y2
protein.
Length = 381
Score = 30.3 bits (65), Expect = 5.7
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -3
Query: 365 CL*FPLEVTLGGVYPLAPYPCVVVPWYRVLLFASLVVQLCTLSCSFGTCCIFYSE 201
CL F L TL G + + P C +VP+ + L + L ++ C +++ E
Sbjct: 103 CLPFTLTYTLMGEWKMGPVLCHLVPYAQGLAVQVSTITLTVIALDRHRCIVYHLE 157
>BC017490-1|AAH17490.2| 904|Homo sapiens minichromosome maintenance
complex component 2 protein.
Length = 904
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 378 SAIRQRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 506
S+ QRR P + GR+ TDALT S GR + + D ++
Sbjct: 12 SSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 54
>BC017258-1|AAH17258.2| 904|Homo sapiens minichromosome maintenance
complex component 2 protein.
Length = 904
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 378 SAIRQRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 506
S+ QRR P + GR+ TDALT S GR + + D ++
Sbjct: 12 SSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 54
>BC014272-1|AAH14272.2| 904|Homo sapiens minichromosome maintenance
complex component 2 protein.
Length = 904
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 378 SAIRQRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 506
S+ QRR P + GR+ TDALT S GR + + D ++
Sbjct: 12 SSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 54
>BC007938-1|AAH07938.2| 904|Homo sapiens minichromosome maintenance
complex component 2 protein.
Length = 904
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 378 SAIRQRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 506
S+ QRR P + GR+ TDALT S GR + + D ++
Sbjct: 12 SSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 54
>BC007670-1|AAH07670.2| 904|Homo sapiens minichromosome maintenance
complex component 2 protein.
Length = 904
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 378 SAIRQRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 506
S+ QRR P + GR+ TDALT S GR + + D ++
Sbjct: 12 SSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 54
>BC006165-1|AAH06165.3| 904|Homo sapiens minichromosome maintenance
complex component 2 protein.
Length = 904
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 378 SAIRQRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 506
S+ QRR P + GR+ TDALT S GR + + D ++
Sbjct: 12 SSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 54
>AY675259-1|AAT70723.1| 904|Homo sapiens MCM2 minichromosome
maintenance deficient 2, mitotin (S. cerevisiae)
protein.
Length = 904
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 378 SAIRQRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 506
S+ QRR P + GR+ TDALT S GR + + D ++
Sbjct: 12 SSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 54
>AY236540-1|AAO92062.1| 381|Homo sapiens neuropeptide Y receptor Y2
protein.
Length = 381
Score = 30.3 bits (65), Expect = 5.7
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -3
Query: 365 CL*FPLEVTLGGVYPLAPYPCVVVPWYRVLLFASLVVQLCTLSCSFGTCCIFYSE 201
CL F L TL G + + P C +VP+ + L + L ++ C +++ E
Sbjct: 103 CLPFTLTYTLMGEWKMGPVLCHLVPYAQGLAVQVSTITLTVIALDRHRCIVYHLE 157
>AC104407-1|AAY40940.1| 381|Homo sapiens unknown protein.
Length = 381
Score = 30.3 bits (65), Expect = 5.7
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -3
Query: 365 CL*FPLEVTLGGVYPLAPYPCVVVPWYRVLLFASLVVQLCTLSCSFGTCCIFYSE 201
CL F L TL G + + P C +VP+ + L + L ++ C +++ E
Sbjct: 103 CLPFTLTYTLMGEWKMGPVLCHLVPYAQGLAVQVSTITLTVIALDRHRCIVYHLE 157
>U32500-1|AAA93170.1| 381|Homo sapiens type 2 neuropeptide Y
receptor protein.
Length = 381
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -3
Query: 365 CL*FPLEVTLGGVYPLAPYPCVVVPWYRVLLFASLVVQLCTLSCSFGTCCIFYSE 201
CL F L TL G + + P C +VP+ + L + L ++ C +++ E
Sbjct: 103 CLPFTLTYTLMGEWKMGPVLCHLVPYAQGLAAQVSTITLTVIALDRHRCIVYHLE 157
>AK127831-1|BAC87152.1| 187|Homo sapiens protein ( Homo sapiens
cDNA FLJ45934 fis, clone PLACE7003684. ).
Length = 187
Score = 29.5 bits (63), Expect = 9.9
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -2
Query: 330 RVPPRPVPLCGGAVVQGVVICVP 262
RVPPRP P G AV+QG V P
Sbjct: 25 RVPPRPKPRSGVAVLQGRVDAEP 47
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,509,785
Number of Sequences: 237096
Number of extensions: 2075328
Number of successful extensions: 4588
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4578
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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