Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1113
(659 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 184 6e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 183 8e-47
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 183 8e-47
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 182 2e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 181 3e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 181 3e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 181 3e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 181 4e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 181 4e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 164 4e-41
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 160 9e-40
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 159 2e-39
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 112 2e-25
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 96 2e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 87 1e-17
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 72 4e-13
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 1e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 61 6e-10
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 50 1e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.096
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 33 0.17
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 33 0.17
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 32 0.39
At5g57625.1 68418.m07199 allergen V5/Tpx-1-related family protei... 31 0.51
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 30 1.2
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 30 1.2
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 30 1.2
At5g18270.2 68418.m02148 no apical meristem (NAM) family protein... 30 1.6
At5g18270.1 68418.m02147 no apical meristem (NAM) family protein... 30 1.6
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 29 2.1
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 29 2.1
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 29 2.1
At4g17410.1 68417.m02607 expressed protein 29 2.7
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.7
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.7
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 28 4.8
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 28 6.3
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 28 6.3
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 8.4
At3g28790.1 68416.m03593 expressed protein 27 8.4
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 27 8.4
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 27 8.4
At1g70080.1 68414.m08063 terpene synthase/cyclase family protein... 27 8.4
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (447), Expect = 6e-47
Identities = 83/87 (95%), Positives = 86/87 (98%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 428 QIMFETFNTPAMYVAIQAVLSLYASGR 508
QIMFETFNTPAMYVAIQAVLSLYASGR
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGR 149
Score = 112 bits (270), Expect = 2e-25
Identities = 51/60 (85%), Positives = 55/60 (91%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Score = 94.3 bits (224), Expect = 6e-20
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +1
Query: 508 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 639
+TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 150 TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 193
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 183 bits (446), Expect = 8e-47
Identities = 83/87 (95%), Positives = 85/87 (97%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 428 QIMFETFNTPAMYVAIQAVLSLYASGR 508
QIMFETFNTPAMYVAIQAVLSLYASGR
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGR 149
Score = 112 bits (270), Expect = 2e-25
Identities = 51/60 (85%), Positives = 55/60 (91%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Score = 92.3 bits (219), Expect = 3e-19
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = +1
Query: 508 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 639
+TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMK
Sbjct: 150 TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMK 193
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 183 bits (446), Expect = 8e-47
Identities = 83/87 (95%), Positives = 85/87 (97%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 428 QIMFETFNTPAMYVAIQAVLSLYASGR 508
QIMFETFNTPAMYVAIQAVLSLYASGR
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGR 149
Score = 112 bits (270), Expect = 2e-25
Identities = 51/60 (85%), Positives = 55/60 (91%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Score = 92.3 bits (219), Expect = 3e-19
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = +1
Query: 508 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 639
+TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMK
Sbjct: 150 TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMK 193
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (442), Expect = 2e-46
Identities = 82/87 (94%), Positives = 85/87 (97%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 428 QIMFETFNTPAMYVAIQAVLSLYASGR 508
QIMFETFN PAMYVAIQAVLSLYASGR
Sbjct: 123 QIMFETFNVPAMYVAIQAVLSLYASGR 149
Score = 112 bits (270), Expect = 2e-25
Identities = 51/60 (85%), Positives = 55/60 (91%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Score = 90.6 bits (215), Expect = 8e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +1
Query: 508 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 639
+TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMK
Sbjct: 150 TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMK 193
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 181 bits (441), Expect = 3e-46
Identities = 80/87 (91%), Positives = 86/87 (98%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 428 QIMFETFNTPAMYVAIQAVLSLYASGR 508
QIMFETFN+PAMYVAIQAVLSLYASGR
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGR 149
Score = 108 bits (259), Expect = 4e-24
Identities = 47/60 (78%), Positives = 54/60 (90%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Score = 91.5 bits (217), Expect = 5e-19
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +1
Query: 508 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 639
+TGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMK
Sbjct: 150 TTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMK 193
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 181 bits (441), Expect = 3e-46
Identities = 80/87 (91%), Positives = 86/87 (98%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 428 QIMFETFNTPAMYVAIQAVLSLYASGR 508
QIMFETFN+PAMYVAIQAVLSLYASGR
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGR 149
Score = 108 bits (259), Expect = 4e-24
Identities = 47/60 (78%), Positives = 54/60 (90%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Score = 91.5 bits (217), Expect = 5e-19
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +1
Query: 508 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 639
+TGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMK
Sbjct: 150 TTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMK 193
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 181 bits (441), Expect = 3e-46
Identities = 80/87 (91%), Positives = 86/87 (98%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 428 QIMFETFNTPAMYVAIQAVLSLYASGR 508
QIMFETFN+PAMYVAIQAVLSLYASGR
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGR 149
Score = 108 bits (259), Expect = 4e-24
Identities = 47/60 (78%), Positives = 54/60 (90%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Score = 91.5 bits (217), Expect = 5e-19
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +1
Query: 508 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 639
+TGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMK
Sbjct: 150 TTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMK 193
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 181 bits (440), Expect = 4e-46
Identities = 81/87 (93%), Positives = 84/87 (96%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 428 QIMFETFNTPAMYVAIQAVLSLYASGR 508
QIMFETFN PAMYVAIQAVLSLYASGR
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYASGR 149
Score = 112 bits (270), Expect = 2e-25
Identities = 51/60 (85%), Positives = 55/60 (91%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Score = 90.6 bits (215), Expect = 8e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +1
Query: 508 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 639
+TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMK
Sbjct: 150 TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMK 193
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 181 bits (440), Expect = 4e-46
Identities = 81/87 (93%), Positives = 84/87 (96%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ ILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 428 QIMFETFNTPAMYVAIQAVLSLYASGR 508
QIMFETFN PAMYVAIQAVLSLYASGR
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYASGR 149
Score = 112 bits (270), Expect = 2e-25
Identities = 51/60 (85%), Positives = 55/60 (91%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Score = 90.6 bits (215), Expect = 8e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +1
Query: 508 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 639
+TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMK
Sbjct: 150 TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMK 193
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 164 bits (399), Expect = 4e-41
Identities = 70/87 (80%), Positives = 81/87 (93%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
++ IL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMT
Sbjct: 64 RRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMT 123
Query: 428 QIMFETFNTPAMYVAIQAVLSLYASGR 508
QIMFE+F P+MY+ IQAVLSLY+SGR
Sbjct: 124 QIMFESFAFPSMYIGIQAVLSLYSSGR 150
Score = 104 bits (250), Expect = 5e-23
Identities = 45/60 (75%), Positives = 55/60 (91%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 254
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Score = 90.6 bits (215), Expect = 8e-19
Identities = 42/49 (85%), Positives = 45/49 (91%)
Frame = +1
Query: 508 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKDPLTR 654
+TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT+YL K + R
Sbjct: 151 TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMMER 199
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 160 bits (388), Expect = 9e-40
Identities = 75/105 (71%), Positives = 85/105 (80%)
Frame = +2
Query: 194 RDGRYGTEGLLCRR*GTEQKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 373
RDG E + G + ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 374 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR 508
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+SGR
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGR 138
Score = 79.8 bits (188), Expect = 1e-15
Identities = 34/44 (77%), Positives = 40/44 (90%)
Frame = +1
Query: 508 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 639
+TG+VLD G+ VSHTVP+YEGYALPH ILRLDL GRDLTDYL++
Sbjct: 139 TTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIE 182
Score = 61.7 bits (143), Expect = 4e-10
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = +3
Query: 90 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 254
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANR 53
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 159 bits (386), Expect = 2e-39
Identities = 69/87 (79%), Positives = 80/87 (91%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 427
+ ILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMT
Sbjct: 18 RSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMT 77
Query: 428 QIMFETFNTPAMYVAIQAVLSLYASGR 508
QIMFETF P+MY+ +QA LSL+ASGR
Sbjct: 78 QIMFETFAVPSMYIGMQAALSLHASGR 104
Score = 79.4 bits (187), Expect = 2e-15
Identities = 38/49 (77%), Positives = 42/49 (85%)
Frame = +1
Query: 508 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKDPLTR 654
+TG VLDSGDGVS+ VPIYEG ALPHAILRLDLAGR LT+YLMK + R
Sbjct: 105 TTGTVLDSGDGVSYIVPIYEGSALPHAILRLDLAGRHLTNYLMKIMMER 153
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 112 bits (269), Expect = 2e-25
Identities = 46/88 (52%), Positives = 63/88 (71%)
Frame = +2
Query: 242 TEQKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 421
+E + L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREK
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119
Query: 422 MTQIMFETFNTPAMYVAIQAVLSLYASG 505
M + MFE +N +++ IQAVL+LYA G
Sbjct: 120 MIETMFEKYNFAGVFIQIQAVLTLYAQG 147
Score = 61.3 bits (142), Expect = 6e-10
Identities = 26/48 (54%), Positives = 38/48 (79%)
Frame = +1
Query: 511 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKDPLTR 654
TG+V+DSGDGV+H VP+ +GY+ PH R+++AGR +T YL+ D L+R
Sbjct: 150 TGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLV-DLLSR 196
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = +3
Query: 90 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKR 254
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELR 63
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 96.3 bits (229), Expect = 2e-20
Identities = 44/94 (46%), Positives = 59/94 (62%)
Frame = +2
Query: 242 TEQKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 421
+ S L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE
Sbjct: 78 SRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREY 137
Query: 422 MTQIMFETFNTPAMYVAIQAVLSLYASGRPPVSC 523
+I+FETFN P +Y+A+ +VL+L A+G C
Sbjct: 138 TGEILFETFNVPGLYIAVNSVLAL-AAGYTTSKC 170
Score = 48.0 bits (109), Expect = 6e-06
Identities = 18/43 (41%), Positives = 30/43 (69%)
Frame = +1
Query: 511 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 639
TG+V+D GDG +H VP+ EGY + I + +AG+D+T ++ +
Sbjct: 173 TGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQ 215
Score = 35.9 bits (79), Expect = 0.024
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 87 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 173
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 86.6 bits (205), Expect = 1e-17
Identities = 36/78 (46%), Positives = 54/78 (69%)
Frame = +2
Query: 275 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 454
PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK ++MFE +
Sbjct: 94 PIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKV 153
Query: 455 PAMYVAIQAVLSLYASGR 508
PA+++A VL+ +A+GR
Sbjct: 154 PALFMAKNPVLTSFATGR 171
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 176
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +1
Query: 508 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 639
+T +V+D G G + P+++GY L A++ L G LTD L+K
Sbjct: 172 ATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLK 215
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 71.7 bits (168), Expect = 4e-13
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +2
Query: 275 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 451
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 452 TPAMYVAIQAVLSLYASGR 508
Y + QAVLSLYA GR
Sbjct: 117 VSGFYASEQAVLSLYAVGR 135
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 87 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 179
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 63.3 bits (147), Expect = 1e-10
Identities = 32/71 (45%), Positives = 44/71 (61%)
Frame = +2
Query: 209 GTEGLLCRR*GTEQKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 388
G++ L RR +Q IL+ P + GIVT+WD ++ +W H F N L + P EHP+LL E
Sbjct: 72 GSQALNFRR---DQMEILS---PTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAE 125
Query: 389 APLNPKANREK 421
PLN + REK
Sbjct: 126 PPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 9e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 176
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 61.3 bits (142), Expect = 6e-10
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +2
Query: 266 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 445
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 446 FNTPAMYVA-IQAVLSLYASGRPPVS 520
F ++Y+A Q+++ LY + R P S
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDS 146
Score = 48.0 bits (109), Expect = 6e-06
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +1
Query: 433 HVRNIQHARHVRRHPSRALAVRVRSSTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 612
H +++ H R P L+ ++ +V+D G +H VP+ + L HAI R+DL G
Sbjct: 130 HPQSLVHLYEASRQPDSILS---KTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGG 186
Query: 613 RDLTDYL 633
+ T+YL
Sbjct: 187 KAFTNYL 193
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 90 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 182
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 50.0 bits (114), Expect = 1e-06
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Frame = +2
Query: 275 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 451
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 452 TPAMYVAIQAVLSLYASGRPPVSCWTPATVSPTPCPSTKDTHS 580
PA+ + A S Y + C V CP THS
Sbjct: 145 VPAVAFGVDAAFS-YKYNQLHGICKKDGIVL---CPGFTTTHS 183
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +3
Query: 90 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 236
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
Score = 30.7 bits (66), Expect = 0.90
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 514 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 633
GIVL G +H++P +G + R ++ G +TDYL
Sbjct: 171 GIVLCPGFTTTHSIPFVDGEPIYKGSSRTNIGGYHVTDYL 210
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.096
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 211 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 74
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 497 ASGRPPVSCWTPATVSP--TPCPSTKDTHSPTPSCVWT*PVATSQTTS*KIP*PEP 658
++ +P +S TPA+VS P P+ +PTP+ PVA ++T + IP P P
Sbjct: 100 STSQPSISPQTPASVSAPVAPAPTRPPPPAPTPTPA---PVAATETVTTPIPEPVP 152
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 497 ASGRPPVSCWTPATVSP--TPCPSTKDTHSPTPSCVWT*PVATSQTTS*KIP*PEP 658
++ +P +S TPA+VS P P+ +PTP+ PVA ++T + IP P P
Sbjct: 100 STSQPSISPQTPASVSAPVAPAPTRPPPPAPTPTPA---PVAATETVTTPIPEPVP 152
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 31.9 bits (69), Expect = 0.39
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 509 PPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSQTTS*KIP*P 652
PPV+ TP+ ++ P P + T +PT S T PVA+ T P P
Sbjct: 39 PPVTAETPSPIASPPVPVNEPTPAPTTSPT-TSPVASPPQTDAPAPGP 85
>At5g57625.1 68418.m07199 allergen V5/Tpx-1-related family protein
low similarity to SP|Q40374 Pathogenesis-related protein
PR-1 precursor {Medicago truncatula}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 207
Score = 31.5 bits (68), Expect = 0.51
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +2
Query: 446 FNTPAMYVAIQAVLSLYASGRPPV--SCWTPATVSPTPCPSTKDTHSP--TPS 592
F + VA QAV + Y RPPV + + P P P PS K + P TPS
Sbjct: 13 FTISLLLVAFQAVHADYYRQRPPVTPTPYVPKPRYPLPSPSPKPVYRPPTTPS 65
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 10/69 (14%)
Frame = +2
Query: 332 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 481
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 482 VLSLYASGR 508
VL+LYA+ R
Sbjct: 241 VLALYAARR 249
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 10/69 (14%)
Frame = +2
Query: 332 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 481
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 482 VLSLYASGR 508
VL+LYA+ R
Sbjct: 241 VLALYAARR 249
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 503 GRPPVSCWTPATVSPTPCPSTKDTHSPTP 589
G PP S TP SP P P + SPTP
Sbjct: 231 GPPPSSSPTPGPDSPLPSPGPPPSPSPTP 259
>At5g18270.2 68418.m02148 no apical meristem (NAM) family protein
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to cup-shaped cotyledon CUC2
(GI:1944132) [Arabidopsis thaliana]
Length = 335
Score = 29.9 bits (64), Expect = 1.6
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNW--DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 421
+K+++ + G TNW + +++YN + A +E V NP +
Sbjct: 122 KKTLVFYRGRAPKGEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQP 181
Query: 422 MTQIMFETFNTPAMYVAIQAVLSLYASGRPPVSCWTPATVSPTPCPSTKDTHSPT 586
MT+I E F I +L S PP+ P+ +S T P+ K + PT
Sbjct: 182 MTRIPVEDFTRMDSLENIDHLLDF--SSLPPLI--DPSFMSQTEQPNFKPINPPT 232
>At5g18270.1 68418.m02147 no apical meristem (NAM) family protein
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to cup-shaped cotyledon CUC2
(GI:1944132) [Arabidopsis thaliana]
Length = 335
Score = 29.9 bits (64), Expect = 1.6
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNW--DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 421
+K+++ + G TNW + +++YN + A +E V NP +
Sbjct: 122 KKTLVFYRGRAPKGEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQP 181
Query: 422 MTQIMFETFNTPAMYVAIQAVLSLYASGRPPVSCWTPATVSPTPCPSTKDTHSPT 586
MT+I E F I +L S PP+ P+ +S T P+ K + PT
Sbjct: 182 MTRIPVEDFTRMDSLENIDHLLDF--SSLPPLI--DPSFMSQTEQPNFKPINPPT 232
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 509 PPVSCWTPATVSPTPCPSTKDTHSPTP 589
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 509 PPVSCWTPATVSPTPCPSTKDTHSPTP 589
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +2
Query: 509 PPVSCWTPATVSPTPCPSTKDT-HSPTPSC 595
PP+SC TP PCP + HS T C
Sbjct: 647 PPLSCGTPVPSCQLPCPIPQPCGHSDTHGC 676
>At4g17410.1 68417.m02607 expressed protein
Length = 744
Score = 29.1 bits (62), Expect = 2.7
Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Frame = +3
Query: 465 TSPSKPCSRC--TRPVVHRYRAGLRR-RCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPH 635
+SP KP SR P+ Y R R P R RR +PPR + R R H L
Sbjct: 551 SSPVKPKSRQGPPPPISSDYDRRRRSDRSSPERQSSRRFTSPPRSSSRKSERDRHHDLDS 610
Query: 636 ERSLNPSR 659
E R
Sbjct: 611 EHDRRRDR 618
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +2
Query: 245 EQKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 421
E L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 173 EALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +2
Query: 245 EQKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 421
E L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 173 EALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +1
Query: 388 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRAL 489
GSP+ +G + E+D D + NI+H + +H + A+
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAM 127
>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 631
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 458 AMYVAIQAVLSLYASGRPPVSCWTPATVSPTPCPSTKDTHSPTPS 592
+M AI++ S +A+ PV +P SP+P PS + SP+PS
Sbjct: 509 SMVGAIESRSSTHATIEDPVCEQSP---SPSPSPSPSPSPSPSPS 550
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces
cerevisiae]
Length = 1252
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 510 HRYRAGLRRRCL-PHRAHLRRIRTPPRHPASG 602
+ ++AG R R L P + L +R PPR PA+G
Sbjct: 601 YTFKAGDRVRFLGPSTSSLASLRAPPRGPATG 632
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 187 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 65
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 542 SPTPCPSTKDTHSPTPS 592
SPTP PST +PTPS
Sbjct: 278 SPTPTPSTPTPSTPTPS 294
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +2
Query: 497 ASGRPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSQTTS*KIP*PEP 658
A+ PPVS P T SP P + +P P P + T + P P
Sbjct: 42 AATPPPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPPPATPPPVASPPP 95
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +2
Query: 497 ASGRPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSQTTS*KIP*PEP 658
A+ PPVS P T SP P + +P P P + T + P P
Sbjct: 42 AATPPPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPPPATPPPVASPPP 95
>At1g70080.1 68414.m08063 terpene synthase/cyclase family protein
similar to (+)-delta-cadinene synthase [Gossypium
hirsutum][GI:8389329], sesquiterpene synthases
[GI:11934937][Lycopersicon hirsutum],
[GI:11934933][Lycopersicon esculentum]; contains Pfam
profile: PF01397: Terpene synthase family
Length = 611
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 464 YVAIQAVLSLYASGRPPVSCWTPATVSPTPCPSTKDTHSPTPSCVW 601
Y +++ LS P C AT +PT ST + +P P +W
Sbjct: 31 YPLLKSSLSFSRFQSPKKLCLVRATTNPTDDNSTTRSFTPHPPSLW 76
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,649,744
Number of Sequences: 28952
Number of extensions: 411983
Number of successful extensions: 1537
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1510
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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