Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1112
(633 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 33 0.003
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 31 0.006
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 31 0.006
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 30 0.018
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 30 0.018
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 27 0.098
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 27 0.17
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 24 0.92
L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 24 0.92
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 24 0.92
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 24 0.92
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 24 1.2
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 24 1.2
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 23 1.6
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 23 2.1
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 23 2.8
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 23 2.8
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 23 2.8
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 6.5
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 32.7 bits (71), Expect = 0.003
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = -1
Query: 633 QRRYRT---ERPFSCSQCSARFTLRSNMERHV 547
Q YRT ERPF C C FT + N++ H+
Sbjct: 151 QMHYRTHTGERPFKCKICGRAFTTKGNLKTHM 182
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 31.5 bits (68), Expect = 0.006
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -1
Query: 633 QRRYRTERPFSCSQCSARFTLRSNMERHVK 544
+R + E+PF C +C RFT +++ H++
Sbjct: 1 ERTHTGEKPFECQECHKRFTRDHHLKTHMR 30
Score = 30.3 bits (65), Expect = 0.014
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 630 RRYRTERPFSCSQCSARFTLRSNMERHVK 544
R + ERP+ C C +F +N+ RH++
Sbjct: 30 RLHTGERPYRCEHCDRQFVQVANLRRHLR 58
Score = 21.8 bits (44), Expect = 4.9
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -1
Query: 630 RRYRTERPFSCSQCSAR 580
R + ERP+ C CS +
Sbjct: 58 RVHTGERPYGCEHCSMK 74
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 31.5 bits (68), Expect = 0.006
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -1
Query: 633 QRRYRTERPFSCSQCSARFTLRSNMERHVK 544
+R + E+PF C +C RFT +++ H++
Sbjct: 154 ERTHTGEKPFECQECHKRFTRDHHLKTHMR 183
Score = 30.3 bits (65), Expect = 0.014
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 630 RRYRTERPFSCSQCSARFTLRSNMERHVK 544
R + ERP+ C C +F +N+ RH++
Sbjct: 183 RLHTGERPYRCEHCDRQFVQVANLRRHLR 211
Score = 28.7 bits (61), Expect = 0.043
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -1
Query: 630 RRYRTERPFSCSQCSARFTLRSNMERHV 547
R + ERP+ C CS +F+ + ++ HV
Sbjct: 211 RVHTGERPYGCEHCSMKFSDSNQLKAHV 238
Score = 28.3 bits (60), Expect = 0.056
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 624 YRTERPFSCSQCSARFTLRSNMERH 550
+ E+PF C +C RF R ++ H
Sbjct: 241 HTNEKPFECDKCRGRFRRRHHLVHH 265
Score = 23.8 bits (49), Expect = 1.2
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -1
Query: 615 ERPFSCSQCSARFTLRSNMERH 550
+RPF+C C+ F + ++ H
Sbjct: 132 DRPFTCEVCNRSFGYKHVLQNH 153
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 29.9 bits (64), Expect = 0.018
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 630 RRYRTERPFSCSQCSARFTLRSNMERHVK 544
R + E+P+ C C RF+ N+ RH++
Sbjct: 98 RIHSGEKPYECKLCLLRFSQSGNLNRHMR 126
Score = 28.3 bits (60), Expect = 0.056
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 630 RRYRTERPFSCSQCSARFTLRSNMERHVK 544
R + E+PF C C RF+ S++ H++
Sbjct: 42 RTHSGEKPFRCPVCDRRFSQSSSVTTHMR 70
Score = 27.9 bits (59), Expect = 0.075
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = -1
Query: 630 RRYRTERPFSCSQCSARFTLRSNMERHVK 544
R + E+P+ C C+ F+ +N+ HV+
Sbjct: 14 RTHSGEKPYRCIDCNKSFSQAANLTAHVR 42
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 29.9 bits (64), Expect = 0.018
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 630 RRYRTERPFSCSQCSARFTLRSNMERHVK 544
R + E+P+ C C RF+ N+ RH++
Sbjct: 354 RIHSGEKPYECKLCLLRFSQSGNLNRHMR 382
Score = 28.3 bits (60), Expect = 0.056
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 630 RRYRTERPFSCSQCSARFTLRSNMERHVK 544
R + E+PF C C RF+ S++ H++
Sbjct: 298 RTHSGEKPFRCPVCDRRFSQSSSVTTHMR 326
Score = 27.9 bits (59), Expect = 0.075
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = -1
Query: 630 RRYRTERPFSCSQCSARFTLRSNMERHVK 544
R + E+P+ C C+ F+ +N+ HV+
Sbjct: 270 RTHSGEKPYRCIDCNKSFSQAANLTAHVR 298
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 27.5 bits (58), Expect = 0.098
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = -1
Query: 627 RYRT-ERPFSCSQ--CSARFTLRSNMERHVK 544
R+ T ERPF C+ C RFT ++RH++
Sbjct: 337 RWHTGERPFVCNWLFCGKRFTRSDELQRHLR 367
Score = 27.5 bits (58), Expect = 0.098
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -1
Query: 633 QRRYRT---ERPFSCSQCSARFTLRSNMERHVK 544
QR RT E+ F+C C+ RF ++ +HVK
Sbjct: 363 QRHLRTHTGEKRFACPICNKRFMRSDHLAKHVK 395
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 26.6 bits (56), Expect = 0.17
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -1
Query: 633 QRRYRTERPFSCSQCSARFTLRSNMERH 550
+R + ERP+SC C F + ++ H
Sbjct: 99 ERTHTDERPYSCDICGKAFRRQDHLRDH 126
Score = 22.2 bits (45), Expect = 3.7
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -1
Query: 627 RYRTERPFSCSQCSARFTLRSNMERH 550
+ + +R F C C+ +FT N+ H
Sbjct: 73 KLKPKRQFICKYCNRQFTKSYNLLIH 98
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 24.2 bits (50), Expect = 0.92
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = -1
Query: 630 RRYRTERPFSCSQCSARFTLRSNMERHVK 544
R + +PF C++C +S + H+K
Sbjct: 251 RNHAGSKPFQCNKCDYTCVNKSMLNSHMK 279
>L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein
protein.
Length = 46
Score = 24.2 bits (50), Expect = 0.92
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 630 RRYRTERPFSCSQCSARF 577
R + E+PFSC+ C+ F
Sbjct: 28 RTHTGEKPFSCTYCNRAF 45
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 24.2 bits (50), Expect = 0.92
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = -1
Query: 630 RRYRTERPFSCSQCSARFTLRSNMERHVK 544
R + +PF C++C +S + H+K
Sbjct: 9 RNHAGSKPFQCNKCDYTCVNKSMLNSHMK 37
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 24.2 bits (50), Expect = 0.92
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 215 AGNLINKPVPIAEKTESGPDPTPGQDLLTVPVVP 114
A N + P P + TE P P PG T P +P
Sbjct: 306 AFNSVATPTPTSVMTELYPSPVPGHS--TSPNLP 337
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 23.8 bits (49), Expect = 1.2
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -1
Query: 564 NMERHVKQQHPQH 526
+M H+++QHPQH
Sbjct: 166 HMGHHMQEQHPQH 178
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 23.8 bits (49), Expect = 1.2
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -1
Query: 564 NMERHVKQQHPQH 526
+M H+++QHPQH
Sbjct: 168 HMGHHMQEQHPQH 180
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 23.4 bits (48), Expect = 1.6
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +2
Query: 260 HQYFGSCLSGCSMFFGLGFHIRFLVNY*GVVLIFFII 370
H + ++ + FGLG + F V++ + + F+I
Sbjct: 226 HHHLSKLVTRFNEIFGLGLLLMFAVSFLIITQVIFVI 262
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 23.0 bits (47), Expect = 2.1
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -3
Query: 544 TTASPTLECP*TAQRGPPPY 485
T SPT+ C PPPY
Sbjct: 315 TVMSPTINCWSLTSSPPPPY 334
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory receptor
candidate 56 protein.
Length = 358
Score = 22.6 bits (46), Expect = 2.8
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +2
Query: 122 LERSANLVLV*GRVQILFSLLWELVY*LNCLLF*DQSLY*SLVVGSHQYFGSCLSGCSMF 301
L R+A LVL+ +L +L + ++ L + F D L L + F S LS CS+
Sbjct: 54 LTRNALLVLI-----LLGALTYHAIFDL--ISFKDSDLQQKLRY-FEEVFSSLLSCCSVI 105
Query: 302 FGLGFHIRFL 331
FG F ++ +
Sbjct: 106 FGCIFALKVI 115
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory receptor
candidate 21 protein.
Length = 386
Score = 22.6 bits (46), Expect = 2.8
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +2
Query: 122 LERSANLVLV*GRVQILFSLLWELVY*LNCLLF*DQSLY*SLVVGSHQYFGSCLSGCSMF 301
L R+A LVL+ +L +L + ++ L + F D L L + F S LS CS+
Sbjct: 54 LTRNALLVLI-----LLGALTYHAIFDL--ISFKDSDLQQKLRY-FEEVFSSLLSCCSVI 105
Query: 302 FGLGFHIRFL 331
FG F ++ +
Sbjct: 106 FGCIFALKVI 115
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 22.6 bits (46), Expect = 2.8
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 134 LTVPVVPTRSDEEEDEEGLVASTSEGN 54
L + + T EED G AS EG+
Sbjct: 29 LKISCLKTTPPPEEDNRGCAASVGEGS 55
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.4 bits (43), Expect = 6.5
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +2
Query: 227 QSLY*SLVVGSHQYFGSCLSGCSMFFGLGFHIRFLVNY*GVVLIFFII 370
QS+ + H + ++ + FGLG + F V++ + FII
Sbjct: 571 QSVVLGRICTLHHHLSKLVTRFNEIFGLGLLLMFGVSFLLITQTIFII 618
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,787
Number of Sequences: 336
Number of extensions: 2872
Number of successful extensions: 34
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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