Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1112
(633 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 32 0.017
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 31 0.023
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 28 0.21
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p... 27 0.37
AJ000038-1|CAA03874.1| 73|Anopheles gambiae F1 protein protein. 27 0.65
Y17717-1|CAA76832.1| 101|Anopheles gambiae cE5 protein protein. 26 1.1
EF990672-1|ABS30733.1| 466|Anopheles gambiae voltage-gated calc... 26 1.1
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr... 25 1.5
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 25 2.6
DQ989011-1|ABK97612.1| 467|Anopheles gambiae gustatory receptor... 24 4.6
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 6.1
AY578810-1|AAT07315.1| 897|Anopheles gambiae smurf protein. 23 8.1
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 23 8.1
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 31.9 bits (69), Expect = 0.017
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 600 CSQCSARFTLRSNMERHVKQQHPQ 529
C C +FT R NM+ H K +HP+
Sbjct: 925 CPVCGQKFTRRDNMKAHCKVKHPE 948
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 31.5 bits (68), Expect = 0.023
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = -1
Query: 615 ERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPLKEAPHLTP 481
++P+ C QC+ F + ++RH+ H + P K H+ P
Sbjct: 380 QKPYKCDQCAQTFRQKQLLKRHMNYYHNPDYVAPTP-KAKTHICP 423
Score = 30.3 bits (65), Expect = 0.053
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 630 RRYRTERPFSCSQCSARFTLRSNMERH 550
R + E+P+SC C ARFT ++++ H
Sbjct: 260 RIHTGEKPYSCDVCFARFTQSNSLKAH 286
Score = 26.6 bits (56), Expect = 0.65
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -1
Query: 627 RYRTERPFSCSQCSARFTLRSNMERHVK 544
R+ ERP C++C S ++RH++
Sbjct: 205 RHTHERPHKCTECDYASVELSKLKRHIR 232
Score = 23.4 bits (48), Expect = 6.1
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = -1
Query: 630 RRYRTERPFSCSQCSARFTLRSNMERHVK 544
R + E+PF C C+ + + RH++
Sbjct: 232 RTHTGEKPFQCPHCTYASPDKFKLTRHMR 260
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 28.3 bits (60), Expect = 0.21
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 606 FSCSQCSARFTLRSNMERHVKQQHP 532
F C C A +T N+ H K +HP
Sbjct: 524 FECPLCRATYTRSDNLRTHCKFKHP 548
>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
exchanger 3 protein.
Length = 1221
Score = 27.5 bits (58), Expect = 0.37
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Frame = -2
Query: 218 IAGNLINKPVPIAEKTESGPDPTPGQDLLTVPVVPTRSDEEEDEEG------LVASTSEG 57
I + N P ++ G P Q + T SDE+++EEG +T
Sbjct: 1131 IKASSTNTPKSAGRRSGGGGGPVNPQTTALLSASSTDSDEDDEEEGSGDRHRADDATRRL 1190
Query: 56 NNSGSDENKSESD 18
N +G+++++ E D
Sbjct: 1191 NGAGNNDDEDEDD 1203
>AJ000038-1|CAA03874.1| 73|Anopheles gambiae F1 protein protein.
Length = 73
Score = 26.6 bits (56), Expect = 0.65
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 119 VPTRSDEEEDEEGLVASTSEGNNSGSDE 36
VPT +E+ DEE L +S ++ G +E
Sbjct: 30 VPTYDEEDFDEESLKPHSSSSSDDGEEE 57
>Y17717-1|CAA76832.1| 101|Anopheles gambiae cE5 protein protein.
Length = 101
Score = 25.8 bits (54), Expect = 1.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 119 VPTRSDEEEDEEGLVASTSEGNNSGSDE 36
VPT +E+ DEE L +S ++ G +E
Sbjct: 30 VPTYDEEDFDEESLKPHSSSPSDDGEEE 57
>EF990672-1|ABS30733.1| 466|Anopheles gambiae voltage-gated calcium
channel beta subunitprotein.
Length = 466
Score = 25.8 bits (54), Expect = 1.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 215 AGNLINKPVPIAEKTESGPDPTPGQD 138
+GNL VP AE + PTPG D
Sbjct: 173 SGNLGASGVPGAEPSRGSTPPTPGDD 198
>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
protein.
Length = 1253
Score = 25.4 bits (53), Expect = 1.5
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -2
Query: 134 LTVPVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSESDVAQP 6
LT V RSD+E+D+ G + N G S S A P
Sbjct: 806 LTGNVSVMRSDDEDDDIGSLDMHRPEGNRGPSSPSSTSGAASP 848
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 24.6 bits (51), Expect = 2.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 444 FWLITLNDHCSQRDRRRDETLMKSPIMKKM 355
FWL++L DH Q R +TL ++ ++
Sbjct: 987 FWLVSLEDH-QQFQRPEQQTLKAGNLLSRV 1015
>DQ989011-1|ABK97612.1| 467|Anopheles gambiae gustatory receptor 22
protein.
Length = 467
Score = 23.8 bits (49), Expect = 4.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 545 FTCLSMLDLNVNLAEHCEQENGLSVR*RL 631
F C+S+L + N A H + GL+ + RL
Sbjct: 345 FYCMSLLFIICNEAHHASKRVGLNFQERL 373
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 23.4 bits (48), Expect = 6.1
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +3
Query: 117 YNWNGQQILSWCRVGS 164
++WNGQ+ +C GS
Sbjct: 1615 FSWNGQEFNLFCSTGS 1630
>AY578810-1|AAT07315.1| 897|Anopheles gambiae smurf protein.
Length = 897
Score = 23.0 bits (47), Expect = 8.1
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = -2
Query: 257 FRQQEINKDFDLKIAGNLINKPVPIAEKTESGPD 156
F ++ F L L+NKP+ +++ + PD
Sbjct: 610 FHNHVLDGGFTLPFYKQLLNKPITLSDIEDVDPD 643
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 23.0 bits (47), Expect = 8.1
Identities = 9/38 (23%), Positives = 21/38 (55%)
Frame = -2
Query: 131 TVPVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSESD 18
T ++ S++E+D + +++ + G G DE S+ +
Sbjct: 1694 TTTIIIHDSEDEKDLDIILSGSGGGVGGGGDEGGSDKE 1731
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,990
Number of Sequences: 2352
Number of extensions: 12576
Number of successful extensions: 78
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -