Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1110
         (656 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...   126   6e-31
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    24   3.7  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   6.4  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    23   6.4  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   6.4  
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    23   8.5  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    23   8.5  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score =  126 bits (304), Expect = 6e-31
 Identities = 57/88 (64%), Positives = 68/88 (77%), Gaps = 1/88 (1%)
 Frame = +1

Query: 250 YTTSAGTSTR-SCDYCQPGQFSSYYLTDLHHEQDNQTWWQSETMKEGIQYPNQVNLTLHL 426
           +    G S R SCD C  GQ S  +LTD H + +N TWWQSETM EG+QYPNQVNLTL L
Sbjct: 77  FCVQTGYSNRKSCDVCHAGQHSPQFLTDFH-DPNNPTWWQSETMFEGVQYPNQVNLTLGL 135

Query: 427 GKAYDITYVRIVFYSPRPQSFAIYKKTT 510
           GK++DITY+RIVF+SPRP+SFAIYK+ T
Sbjct: 136 GKSFDITYIRIVFHSPRPESFAIYKRVT 163



 Score = 61.3 bits (142), Expect = 3e-11
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = +2

Query: 134 CYKSDGKPQRCIPEFENAAYLVQMEATNTCGDNGVKLYCIR 256
           C    G+PQRCIPEFENAAY +Q+EATNTCGD     +C++
Sbjct: 40  CVDPYGRPQRCIPEFENAAYQLQVEATNTCGDETDTDFCVQ 80



 Score = 60.1 bits (139), Expect = 6e-11
 Identities = 27/44 (61%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
 Frame = +3

Query: 522 WEPFQYFSASCRETYGVEEQKSAELGA-ETRALCTSEYSDISSL 650
           W P+QY+SA+CR+TYG+ +  S   G  E+RALCTSEYSDIS L
Sbjct: 168 WIPYQYYSATCRDTYGLPDSLSVMNGEDESRALCTSEYSDISPL 211


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 73  ERSRGSELLPNAEGRL*TSLLL*IRWKTSKMHT 171
           E S  +  +  A+GRL  +LL  +R +T  +HT
Sbjct: 159 EYSNAAVCIDPADGRLKRNLLCPVRLETQPLHT 191


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 370  ETMKEGIQYPNQVNLTLHLGKAYDIT 447
            ET+ E ++   +  LTLHL +  +IT
Sbjct: 1654 ETLLEDVKSDAERKLTLHLSRTAEIT 1679


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 444 YICPDSVLFASTSKFCN 494
           ++CP+S LF  T   CN
Sbjct: 417 FLCPESTLFDQTVLKCN 433


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 444 YICPDSVLFASTSKFCN 494
           ++CP+S LF  T   CN
Sbjct: 425 FLCPESTLFDQTVLKCN 441


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 103 LVIILSHGYAQDTEQICV 50
           L I+L+H YA    ++CV
Sbjct: 192 LAIVLAHSYACPEHELCV 209


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 103 LVIILSHGYAQDTEQICV 50
           L I+L+H YA    ++CV
Sbjct: 192 LAIVLAHSYACPEHELCV 209


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 703,179
Number of Sequences: 2352
Number of extensions: 14726
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)