Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1109
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   5.5  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   5.5  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   5.5  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   7.3  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   7.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.7  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   9.7  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +2

Query: 113 NKNNNTSEFVGNNFSTIESFPQKTKEGFYSY 205
           N+  N  ++  NNFS  E+   +    FY +
Sbjct: 141 NQYENFQQYDNNNFSAEENSVSEPPANFYPW 171


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +2

Query: 113 NKNNNTSEFVGNNFSTIESFPQKTKEGFYSY 205
           N+  N  ++  NNFS  E+   +    FY +
Sbjct: 141 NQYENFQQYDNNNFSAEENSVSEPPANFYPW 171


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +2

Query: 113 NKNNNTSEFVGNNFSTIESFPQKTKEGFYSY 205
           N+  N  ++  NNFS  E+   +    FY +
Sbjct: 141 NQYENFQQYDNNNFSAEENSVSEPPANFYPW 171


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 543 ENINRVSEGRVLTVR*KGAYIISQDLIYFLT 451
           +++NR  E +VLT+     Y       YF T
Sbjct: 221 DDLNRYFEVQVLTIFGVSFYFFISTFFYFFT 251


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 543 ENINRVSEGRVLTVR*KGAYIISQDLIYFLT 451
           +++NR  E +VLT+     Y       YF T
Sbjct: 217 DDLNRYFEVQVLTIFGVSFYFFISTFFYFFT 247


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 17  KIVKFINTPRRLDSRMRAV 73
           KI  F+N   RLD R ++V
Sbjct: 102 KIAHFLNKMIRLDERFQSV 120


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 415 VTDRQTELYSFVLIAIFVLTSNNLFQVK 332
           +T  +  LYS  ++ I   T +N+F +K
Sbjct: 79  ITKAKNLLYSKQIVTILKKTKSNIFILK 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,849
Number of Sequences: 336
Number of extensions: 2965
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)