Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1108
         (626 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.17 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    26   0.22 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    26   0.22 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    25   0.69 
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    24   0.91 
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    24   1.2  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    24   1.2  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   3.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   3.7  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    22   4.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.4  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   8.4  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   8.4  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   8.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = -3

Query: 195 KVDLFYLLHNNFNISSTYLLCSWPF*QD*LFFRSFQM-K*SLITVVYFFLNKITVLSC 25
           ++  FY +   FN+   +LLCS  F    LF+  F +     +   Y+F     +L C
Sbjct: 55  RIYYFYCVSITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYYAFIILLC 112



 Score = 25.0 bits (52), Expect = 0.52
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = -3

Query: 279 FILMRLCQF*VFN*ILFTIYVLFRHCI--CKVDLFYLL 172
           FI++    +  +  I+FT+++LF  CI    V LF+LL
Sbjct: 107 FIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLL 144


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 26.2 bits (55), Expect = 0.22
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 234  LFTIYVLFRHCICKVDLFYLLH 169
            L  +Y+ F   IC  D+FY+ H
Sbjct: 993  LHLVYISFLGIICAADVFYICH 1014



 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = -1

Query: 251  EFLIEFYLQFTFYFGIVFAKLIYFIC 174
            E ++  +L +  + GI+ A  +++IC
Sbjct: 988  EKIVWLHLVYISFLGIICAADVFYIC 1013


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 26.2 bits (55), Expect = 0.22
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 234 LFTIYVLFRHCICKVDLFYLLH 169
           L  +Y+ F   IC  D+FY+ H
Sbjct: 274 LHLVYISFLGIICAADVFYICH 295



 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/40 (22%), Positives = 19/40 (47%)
 Frame = -1

Query: 293 IVNCVLF*CGCANFEFLIEFYLQFTFYFGIVFAKLIYFIC 174
           I   +   C     E ++  +L +  + GI+ A  +++IC
Sbjct: 255 ITQVIFVICVLVQSEKIVWLHLVYISFLGIICAADVFYIC 294


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -1

Query: 266 GCANFE-FLIEFYLQFTFYFGIVFAKLIYFICFTIISIFRLLTYCVVG 126
           G A +E + +EF   F FY   +   LIY +   ++  ++ +TY + G
Sbjct: 137 GVAYYEQYAVEF---FQFYAQFIVYFLIYAVLEMLLQKYKTVTYVMTG 181


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 185 YFICFTIISIFRLLTYCVVGHFNKTDYF 102
           ++IC+TI  I  +   C+   FNK + F
Sbjct: 40  WYICYTIGVIITIGCLCIWSIFNKWNQF 67


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +1

Query: 538 PLSPAGVIAKRPAPIALPNSCA 603
           P  P GV  KR  P AL  +CA
Sbjct: 52  PCPPQGVDLKRVLPEALQTNCA 73


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/45 (22%), Positives = 20/45 (44%)
 Frame = -1

Query: 239 EFYLQFTFYFGIVFAKLIYFICFTIISIFRLLTYCVVGHFNKTDY 105
           EF        G    K +Y++   +I++  +LT C   ++ +  Y
Sbjct: 82  EFLANLKLLKGRKIRKNLYYLLLFVINVLYVLTLCYAVYYWRQQY 126


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 544 SPAGVIAKRPAPIALPNSCA 603
           +P G   KR  P AL N CA
Sbjct: 54  TPEGEELKRDIPEALQNECA 73


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 268 HQNKTQFTIFEILTYHRF 321
           HQ +TQF +  I+   RF
Sbjct: 466 HQGETQFVVANIILRRRF 483


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 544 SPAGVIAKRPAPIALPNSCA 603
           +P+G   K+  P AL N CA
Sbjct: 52  TPSGEELKKDIPDALKNECA 71


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -1

Query: 221  TFYFGIVFAKLIYFICFTIISIFRLL 144
            +FY+ I+       +CFT  S  +L+
Sbjct: 946  SFYYNIIPILFFMLVCFTCKSNIQLI 971


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -1

Query: 221  TFYFGIVFAKLIYFICFTIISIFRLL 144
            +FY+ I+       +CFT  S  +L+
Sbjct: 946  SFYYNIIPILFFMLVCFTCKSNIQLI 971


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -1

Query: 221  TFYFGIVFAKLIYFICFTIISIFRLL 144
            +FY+ I+       +CFT  S  +L+
Sbjct: 946  SFYYNIIPILFFMLVCFTCKSNIQLI 971


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -1

Query: 221  TFYFGIVFAKLIYFICFTIISIFRLL 144
            +FY+ I+       +CFT  S  +L+
Sbjct: 946  SFYYNIIPILFFMLVCFTCKSNIQLI 971


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 544 SPAGVIAKRPAPIALPNSCA 603
           +P G   K+  P AL N CA
Sbjct: 53  TPEGEELKKDIPDALQNECA 72


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 544 SPAGVIAKRPAPIALPNSCA 603
           +P G   K+  P AL N CA
Sbjct: 54  TPEGEELKKDIPEALQNGCA 73


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 544 SPAGVIAKRPAPIALPNSCA 603
           +P G   K+  P AL N CA
Sbjct: 54  TPEGEELKKDIPEALQNGCA 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,205
Number of Sequences: 336
Number of extensions: 3482
Number of successful extensions: 23
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)