Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1107
         (710 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5DL86 Cluster: Putative uncharacterized protein; n=1; ...    36   0.74 
UniRef50_Q4GYH4 Cluster: Putative uncharacterized protein; n=1; ...    35   1.7  
UniRef50_A6Q6Y2 Cluster: Multidrug ABC transporter, permease; n=...    34   3.0  
UniRef50_UPI000049920F Cluster: hypothetical protein 10.t00050; ...    33   6.9  
UniRef50_Q7RN68 Cluster: Putative uncharacterized protein PY0195...    33   6.9  
UniRef50_Q4SVS9 Cluster: Chromosome undetermined SCAF13728, whol...    33   9.2  
UniRef50_O96993 Cluster: Guanylate cyclase; n=1; Heterodera glyc...    33   9.2  

>UniRef50_A5DL86 Cluster: Putative uncharacterized protein; n=1;
            Pichia guilliermondii|Rep: Putative uncharacterized
            protein - Pichia guilliermondii (Yeast) (Candida
            guilliermondii)
          Length = 1625

 Score = 36.3 bits (80), Expect = 0.74
 Identities = 24/70 (34%), Positives = 33/70 (47%)
 Frame = -3

Query: 432  NGLSHNTQGKGNNFRFLSRFWTHHYKVQFAHLSAYLPYRFSLNNSFTIFSIKINLFTFIL 253
            NGL+  TQ  G+    LS     H K   A L +       L N     +IKI+L+ FI 
Sbjct: 899  NGLNSGTQDAGSRLSMLSHLGREHSKSLRASLIS------DLENLLDDHAIKISLYDFIC 952

Query: 252  SITGGVYEGV 223
            ++ GG  EG+
Sbjct: 953  AVMGGRQEGL 962


>UniRef50_Q4GYH4 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 110

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = -3

Query: 366 HHYKVQFAHLSAYLPYRFSLNNSFTIFSIKINLFTFILSITGGVYEGV-LFYFFEFRKSH 190
           H Y +   H+S+ L + FS  +S T+  + + ++ + ++IT G    V L +FF +  S+
Sbjct: 34  HSYHIISYHISSLLFFLFSFLSSSTLLLLLLFVYMYCINITLGYSLSVQLHFFFNYFSSY 93

Query: 189 YIIY 178
             IY
Sbjct: 94  IYIY 97


>UniRef50_A6Q6Y2 Cluster: Multidrug ABC transporter, permease; n=2;
           unclassified Epsilonproteobacteria|Rep: Multidrug ABC
           transporter, permease - Sulfurovum sp. (strain NBC37-1)
          Length = 360

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
 Frame = -3

Query: 387 FLSRFWTHHYKVQFA--HLSAYLPYRFSLNNSFTIFSIKINLFTFILSITGGVYE-GVLF 217
           FLS  WT  Y +  A   LS + P R+ +  S +IF  +   F  +L   GGV   GVL 
Sbjct: 290 FLSGAWTPIYAMHPALQFLSLFSPLRYYIEGSESIF-FRGTDFIDLLPYFGGVLLLGVLL 348

Query: 216 YFFEFRK 196
           Y++ FRK
Sbjct: 349 YWYGFRK 355


>UniRef50_UPI000049920F Cluster: hypothetical protein 10.t00050;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 10.t00050 - Entamoeba histolytica HM-1:IMSS
          Length = 515

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
 Frame = -1

Query: 572 EQCFAEQREDPARNLVGCVMGRWSICKKYLEFICMFSSVRRIYFGNQMAYHIILK-VKVI 396
           E+ +  Q E+   N + C++     C K++EF  +      I+F N++ Y ++ K +KVI
Sbjct: 132 ERLYIIQPENIDVNALNCLI--LFPCLKFVEFCLIEEKQNSIFFTNELIYSLLKKNIKVI 189

Query: 395 ISDFYLGFGHITIKSSSPICPHIYRI 318
           I+   +    I I+S  P   +IY I
Sbjct: 190 INHPEMNENSIHIRSLLP--NNIYNI 213


>UniRef50_Q7RN68 Cluster: Putative uncharacterized protein PY01954;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY01954 - Plasmodium yoelii
           yoelii
          Length = 1628

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +2

Query: 251 DKINVNKFIFIENIVNELFSENLYGKYADKW 343
           DKIN+N+ I   N +N+ F   L+  +ADKW
Sbjct: 760 DKINMNEII---NEINQTFENKLFNMFADKW 787


>UniRef50_Q4SVS9 Cluster: Chromosome undetermined SCAF13728, whole
           genome shotgun sequence; n=3; Euteleostomi|Rep:
           Chromosome undetermined SCAF13728, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 1017

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
 Frame = -2

Query: 622 ATLGLVGELIANTGSNKSSA--SLNREKIRREI*WVVSWVVGQYAKNIWNLFVCSQVYVG 449
           A+LGL G+LIA++    ++A    ++E + + +  ++S  +GQ A     L   S+VY G
Sbjct: 473 ASLGLTGDLIASSFGKSATADREFSKEDMSKSLLHMISNDIGQLACLYAKLHNLSRVYFG 532

Query: 448 STLVTKWP 425
              + + P
Sbjct: 533 GFFIPRTP 540


>UniRef50_O96993 Cluster: Guanylate cyclase; n=1; Heterodera
           glycines|Rep: Guanylate cyclase - Heterodera glycines
           (Soybean cyst nematode worm)
          Length = 1151

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +2

Query: 218 NNTPSYTPPVIDKINVNKFIFIENIVNELFS-ENLYGKYADKWANW 352
           N  P++   +++ +NV   +   NI N +   E LYG  A  W NW
Sbjct: 473 NRQPTFFVTMLNALNVPTVMVKVNITNGVLKMERLYGSEASLWVNW 518


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,949,368
Number of Sequences: 1657284
Number of extensions: 13641896
Number of successful extensions: 32899
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32889
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)