Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1107
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    24   1.1  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    23   3.2  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   3.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   7.5  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.9  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 111 IFFFTQTHNVSSTRIRIVMKLNYI*YSVIFEIQK 212
           +  F+ T NVSSTR +  ++ N+  +   FE+Q+
Sbjct: 11  LLMFSYTDNVSSTRTK-YLRTNFPNFYNDFEVQR 43


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 416 LCDRPFGYQSRSDVHLRTY 472
           +CDR F   S    H+RT+
Sbjct: 54  VCDRRFSQSSSVTTHMRTH 72


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 416 LCDRPFGYQSRSDVHLRTY 472
           +CDR F   S    H+RT+
Sbjct: 310 VCDRRFSQSSSVTTHMRTH 328


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = -2

Query: 535 EI*WVVSWVVGQYAKNIWNLFVCSQ 461
           +I WV+ W+     K+++   +C++
Sbjct: 55  KILWVIYWLQDDALKSVYASLLCTE 79


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 416 LCDRPFGYQSRSDVHLRTY 472
           +C+R FGY+     H RT+
Sbjct: 139 VCNRSFGYKHVLQNHERTH 157


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 698 IIPQLVLFFAYLSAC 654
           ++P +VL F Y S C
Sbjct: 213 MVPLVVLIFTYTSIC 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,845
Number of Sequences: 336
Number of extensions: 3977
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)