Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1107
         (710 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          26   0.31 
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      26   0.31 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   5.0  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   8.7  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 22  YILYLREKSCKTFSSCSKQYHTSNGTRMLVFFFLHRHTM 138
           Y  Y+RE      SS   QYH     R  +++FLH+  M
Sbjct: 233 YYYYMREMLPYWMSS--SQYHMPKEIRGQLYYFLHKQLM 269


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 22  YILYLREKSCKTFSSCSKQYHTSNGTRMLVFFFLHRHTM 138
           Y  Y+RE      SS   QYH     R  +++FLH+  M
Sbjct: 233 YYYYMREMLPYWMSS--SQYHMPKEIRGQLYYFLHKQLM 269


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -3

Query: 375 FWTHHYKVQFAHLSAYLPYRFSLNNSFTIF 286
           FW HH++ ++ + S   PY    N ++T F
Sbjct: 429 FWEHHFQCRYPNASV-TPY----NKNYTKF 453


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/46 (23%), Positives = 20/46 (43%)
 Frame = -3

Query: 294 TIFSIKINLFTFILSITGGVYEGVLFYFFEFRKSHYIIYNLIS*QC 157
           T+F+  I   T +L    G    ++F    F+    + +NL+   C
Sbjct: 111 TVFTYNITNSTPLLKKLYGGNSTIIFLLIRFKSFSLLNFNLLFFNC 156


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,236
Number of Sequences: 438
Number of extensions: 4248
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)