BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1106
(631 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subun... 30 5.9
BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein. 30 5.9
BC008648-1|AAH08648.1| 358|Homo sapiens Unknown (protein for IM... 30 5.9
AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein p... 30 5.9
AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein. 30 5.9
U85962-1|AAC51331.2| 2442|Homo sapiens CREB-binding protein prot... 30 7.8
U47741-1|AAC51770.1| 2442|Homo sapiens CREB-binding protein prot... 30 7.8
U01877-1|AAA18639.1| 2414|Homo sapiens p300 protein protein. 30 7.8
BC099739-1|AAH99739.1| 796|Homo sapiens solute carrier family 4... 30 7.8
BC099711-1|AAH99711.1| 796|Homo sapiens solute carrier family 4... 30 7.8
BC098358-1|AAH98358.1| 796|Homo sapiens solute carrier family 4... 30 7.8
BC098302-1|AAH98302.1| 796|Homo sapiens solute carrier family 4... 30 7.8
BC045642-1|AAH45642.1| 582|Homo sapiens metadherin protein. 30 7.8
BC014977-1|AAH14977.1| 450|Homo sapiens Unknown (protein for IM... 30 7.8
BC009324-1|AAH09324.1| 448|Homo sapiens MTDH protein protein. 30 7.8
AY974040-1|AAX84832.1| 582|Homo sapiens LYRIC protein. 30 7.8
AY082966-1|AAL92861.1| 582|Homo sapiens LYRIC protein. 30 7.8
AY028435-1|AAK29177.1| 796|Homo sapiens adaptor protein kanadap... 30 7.8
AL096765-1|CAH73688.1| 2414|Homo sapiens E1A binding protein p30... 30 7.8
AL080243-3|CAH70384.1| 2414|Homo sapiens E1A binding protein p30... 30 7.8
AL035658-3|CAI23037.1| 2414|Homo sapiens E1A binding protein p30... 30 7.8
AK001486-1|BAA91718.1| 796|Homo sapiens protein ( Homo sapiens ... 30 7.8
AF501310-1|AAP30791.1| 582|Homo sapiens LYRIC/3D3 protein. 30 7.8
AF411226-1|AAO65771.1| 582|Homo sapiens astrocyte elevated gene... 30 7.8
AC074091-2|AAX93203.1| 796|Homo sapiens unknown protein. 30 7.8
AC004760-1|AAC17736.1| 923|Homo sapiens CBP protein. 30 7.8
AB210043-1|BAE06125.1| 2472|Homo sapiens CREBBP variant protein ... 30 7.8
>X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subunit
protein.
Length = 1020
Score = 30.3 bits (65), Expect = 5.9
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +2
Query: 242 EESRTAPVSNDEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAK 421
E+ + P E PA E K+D E +++A +K +E +A +
Sbjct: 898 EDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVA----KKEPDDAKAKEPSKPAEKKEAAPE 953
Query: 422 SADIKVEEPAAQPEDS-KTEVQA 487
D K EE A +PE+ KTE +A
Sbjct: 954 KKDTK-EEKAKKPEEKPKTEAKA 975
>BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein.
Length = 1026
Score = 30.3 bits (65), Expect = 5.9
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +2
Query: 242 EESRTAPVSNDEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAK 421
E+ + P E PA E K+D E +++A +K +E +A +
Sbjct: 904 EDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVA----KKEPDDAKAKEPSKPAEKKEAAPE 959
Query: 422 SADIKVEEPAAQPEDS-KTEVQA 487
D K EE A +PE+ KTE +A
Sbjct: 960 KKDTK-EEKAKKPEEKPKTEAKA 981
>BC008648-1|AAH08648.1| 358|Homo sapiens Unknown (protein for
IMAGE:3866238) protein.
Length = 358
Score = 30.3 bits (65), Expect = 5.9
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +2
Query: 242 EESRTAPVSNDEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAK 421
E+ + P E PA E K+D E +++A +K +E +A +
Sbjct: 236 EDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVA----KKEPDDAKAKEPSKPAEKKEAAPE 291
Query: 422 SADIKVEEPAAQPEDS-KTEVQA 487
D K EE A +PE+ KTE +A
Sbjct: 292 KKDTK-EEKAKKPEEKPKTEAKA 313
>AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein
protein.
Length = 1026
Score = 30.3 bits (65), Expect = 5.9
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +2
Query: 242 EESRTAPVSNDEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAK 421
E+ + P E PA E K+D E +++A +K +E +A +
Sbjct: 904 EDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVA----KKEPDDAKAKEPSKPAEKKEAAPE 959
Query: 422 SADIKVEEPAAQPEDS-KTEVQA 487
D K EE A +PE+ KTE +A
Sbjct: 960 KKDTK-EEKAKKPEEKPKTEAKA 981
>AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein.
Length = 1034
Score = 30.3 bits (65), Expect = 5.9
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +2
Query: 242 EESRTAPVSNDEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAK 421
E+ + P E PA E K+D E +++A +K +E +A +
Sbjct: 912 EDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVA----KKEPDDAKAKEPSKPAEKKEAAPE 967
Query: 422 SADIKVEEPAAQPEDS-KTEVQA 487
D K EE A +PE+ KTE +A
Sbjct: 968 KKDTK-EEKAKKPEEKPKTEAKA 989
>U85962-1|AAC51331.2| 2442|Homo sapiens CREB-binding protein protein.
Length = 2442
Score = 29.9 bits (64), Expect = 7.8
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 468 QKLKYKLPSLKFQKRKT*--CY*CRRFCRLSCHHSQHGEEDR 587
QK+K + K KRKT C C++ L C+H++H +E++
Sbjct: 1796 QKMKRVVQHTKGCKRKTNGGCPVCKQLIALCCYHAKHCQENK 1837
>U47741-1|AAC51770.1| 2442|Homo sapiens CREB-binding protein protein.
Length = 2442
Score = 29.9 bits (64), Expect = 7.8
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 468 QKLKYKLPSLKFQKRKT*--CY*CRRFCRLSCHHSQHGEEDR 587
QK+K + K KRKT C C++ L C+H++H +E++
Sbjct: 1796 QKMKRVVQHTKGCKRKTNGGCPVCKQLIALCCYHAKHCQENK 1837
>U01877-1|AAA18639.1| 2414|Homo sapiens p300 protein protein.
Length = 2414
Score = 29.9 bits (64), Expect = 7.8
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 468 QKLKYKLPSLKFQKRKT*--CY*CRRFCRLSCHHSQHGEEDR 587
QK+K + K KRKT C C++ L C+H++H +E++
Sbjct: 1759 QKMKRVVQHTKGCKRKTNGGCPICKQLIALCCYHAKHCQENK 1800
>BC099739-1|AAH99739.1| 796|Homo sapiens solute carrier family 4
(anion exchanger), member 1, adaptor protein protein.
Length = 796
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 431 IKVEEPAAQPEDSKTEVQATVAEISKKKNLVL 526
IK+ +PA PE KTE Q T AE +K K L L
Sbjct: 575 IKIVKPAEIPELKKTETQTTGAE-NKAKKLTL 605
>BC099711-1|AAH99711.1| 796|Homo sapiens solute carrier family 4
(anion exchanger), member 1, adaptor protein protein.
Length = 796
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 431 IKVEEPAAQPEDSKTEVQATVAEISKKKNLVL 526
IK+ +PA PE KTE Q T AE +K K L L
Sbjct: 575 IKIVKPAEIPELKKTETQTTGAE-NKAKKLTL 605
>BC098358-1|AAH98358.1| 796|Homo sapiens solute carrier family 4
(anion exchanger), member 1, adaptor protein protein.
Length = 796
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 431 IKVEEPAAQPEDSKTEVQATVAEISKKKNLVL 526
IK+ +PA PE KTE Q T AE +K K L L
Sbjct: 575 IKIVKPAEIPELKKTETQTTGAE-NKAKKLTL 605
>BC098302-1|AAH98302.1| 796|Homo sapiens solute carrier family 4
(anion exchanger), member 1, adaptor protein protein.
Length = 796
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 431 IKVEEPAAQPEDSKTEVQATVAEISKKKNLVL 526
IK+ +PA PE KTE Q T AE +K K L L
Sbjct: 575 IKIVKPAEIPELKKTETQTTGAE-NKAKKLTL 605
>BC045642-1|AAH45642.1| 582|Homo sapiens metadherin protein.
Length = 582
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 203 LG*TYRSSCCH*REESRTAPVSNDEVPAIPEAKKDDIA 316
LG + ++C R++ R+ P +E A+P A DD+A
Sbjct: 67 LGYGWAAACAGSRKKRRSPPRKREEAAAVPAAAPDDLA 104
>BC014977-1|AAH14977.1| 450|Homo sapiens Unknown (protein for
IMAGE:4859424) protein.
Length = 450
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 203 LG*TYRSSCCH*REESRTAPVSNDEVPAIPEAKKDDIA 316
LG + ++C R++ R+ P +E A+P A DD+A
Sbjct: 67 LGYGWAAACAGARKKRRSPPRKREEAAAVPAAAPDDLA 104
>BC009324-1|AAH09324.1| 448|Homo sapiens MTDH protein protein.
Length = 448
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 203 LG*TYRSSCCH*REESRTAPVSNDEVPAIPEAKKDDIA 316
LG + ++C R++ R+ P +E A+P A DD+A
Sbjct: 67 LGYGWAAACAGSRKKRRSPPRKREEAAAVPAAAPDDLA 104
>AY974040-1|AAX84832.1| 582|Homo sapiens LYRIC protein.
Length = 582
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 203 LG*TYRSSCCH*REESRTAPVSNDEVPAIPEAKKDDIA 316
LG + ++C R++ R+ P +E A+P A DD+A
Sbjct: 67 LGYGWAAACAGARKKRRSPPRKREEAAAVPAAAPDDLA 104
>AY082966-1|AAL92861.1| 582|Homo sapiens LYRIC protein.
Length = 582
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 203 LG*TYRSSCCH*REESRTAPVSNDEVPAIPEAKKDDIA 316
LG + ++C R++ R+ P +E A+P A DD+A
Sbjct: 67 LGYGWAAACAGARKKRRSPPRKREEAAAVPAAAPDDLA 104
>AY028435-1|AAK29177.1| 796|Homo sapiens adaptor protein kanadaptin
protein.
Length = 796
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 431 IKVEEPAAQPEDSKTEVQATVAEISKKKNLVL 526
IK+ +PA PE KTE Q T AE +K K L L
Sbjct: 575 IKIVKPAEIPELKKTETQTTGAE-NKAKKLTL 605
>AL096765-1|CAH73688.1| 2414|Homo sapiens E1A binding protein p300
protein.
Length = 2414
Score = 29.9 bits (64), Expect = 7.8
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 468 QKLKYKLPSLKFQKRKT*--CY*CRRFCRLSCHHSQHGEEDR 587
QK+K + K KRKT C C++ L C+H++H +E++
Sbjct: 1759 QKMKRVVQHTKGCKRKTNGGCPICKQLIALCCYHAKHCQENK 1800
>AL080243-3|CAH70384.1| 2414|Homo sapiens E1A binding protein p300
protein.
Length = 2414
Score = 29.9 bits (64), Expect = 7.8
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 468 QKLKYKLPSLKFQKRKT*--CY*CRRFCRLSCHHSQHGEEDR 587
QK+K + K KRKT C C++ L C+H++H +E++
Sbjct: 1759 QKMKRVVQHTKGCKRKTNGGCPICKQLIALCCYHAKHCQENK 1800
>AL035658-3|CAI23037.1| 2414|Homo sapiens E1A binding protein p300
protein.
Length = 2414
Score = 29.9 bits (64), Expect = 7.8
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 468 QKLKYKLPSLKFQKRKT*--CY*CRRFCRLSCHHSQHGEEDR 587
QK+K + K KRKT C C++ L C+H++H +E++
Sbjct: 1759 QKMKRVVQHTKGCKRKTNGGCPICKQLIALCCYHAKHCQENK 1800
>AK001486-1|BAA91718.1| 796|Homo sapiens protein ( Homo sapiens
cDNA FLJ10624 fis, clone NT2RP2005525, highly similar to
Mus musculus kanadaptin mRNA. ).
Length = 796
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 431 IKVEEPAAQPEDSKTEVQATVAEISKKKNLVL 526
IK+ +PA PE KTE Q T AE +K K L L
Sbjct: 575 IKIVKPAEIPELKKTETQTTGAE-NKAKKLTL 605
>AF501310-1|AAP30791.1| 582|Homo sapiens LYRIC/3D3 protein.
Length = 582
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 203 LG*TYRSSCCH*REESRTAPVSNDEVPAIPEAKKDDIA 316
LG + ++C R++ R+ P +E A+P A DD+A
Sbjct: 67 LGYGWAAACAGARKKRRSPPRKREEAAAVPAAAPDDLA 104
>AF411226-1|AAO65771.1| 582|Homo sapiens astrocyte elevated gene-1
AEG1 protein.
Length = 582
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 203 LG*TYRSSCCH*REESRTAPVSNDEVPAIPEAKKDDIA 316
LG + ++C R++ R+ P +E A+P A DD+A
Sbjct: 67 LGYGWAAACAGARKKRRSPPRKREEAAAVPAAAPDDLA 104
>AC074091-2|AAX93203.1| 796|Homo sapiens unknown protein.
Length = 796
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 431 IKVEEPAAQPEDSKTEVQATVAEISKKKNLVL 526
IK+ +PA PE KTE Q T AE +K K L L
Sbjct: 575 IKIVKPAEIPELKKTETQTTGAE-NKAKKLTL 605
>AC004760-1|AAC17736.1| 923|Homo sapiens CBP protein.
Length = 923
Score = 29.9 bits (64), Expect = 7.8
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 468 QKLKYKLPSLKFQKRKT*--CY*CRRFCRLSCHHSQHGEEDR 587
QK+K + K KRKT C C++ L C+H++H +E++
Sbjct: 277 QKMKRVVQHTKGCKRKTNGGCPVCKQLIALCCYHAKHCQENK 318
>AB210043-1|BAE06125.1| 2472|Homo sapiens CREBBP variant protein
protein.
Length = 2472
Score = 29.9 bits (64), Expect = 7.8
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 468 QKLKYKLPSLKFQKRKT*--CY*CRRFCRLSCHHSQHGEEDR 587
QK+K + K KRKT C C++ L C+H++H +E++
Sbjct: 1826 QKMKRVVQHTKGCKRKTNGGCPVCKQLIALCCYHAKHCQENK 1867
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,264,920
Number of Sequences: 237096
Number of extensions: 1240841
Number of successful extensions: 3207
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3206
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -