Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1106
         (631 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL133503-1|CAB63507.1|  259|Drosophila melanogaster EG:BACH48C10...    29   3.9  
AE014298-383|AAF45771.1|  259|Drosophila melanogaster CG14050-PA...    29   3.9  
AY052048-1|AAK93472.1|  537|Drosophila melanogaster LP06937p pro...    29   5.2  
AE014297-2561|AAN13783.1|  537|Drosophila melanogaster CG7702-PB...    29   5.2  
AE014297-2560|AAF55580.1|  537|Drosophila melanogaster CG7702-PA...    29   5.2  
AE014297-674|AAF54169.1|  549|Drosophila melanogaster CG11094-PA...    28   9.1  
AE014296-1304|AAN12045.1| 9196|Drosophila melanogaster CG32377-P...    28   9.1  

>AL133503-1|CAB63507.1|  259|Drosophila melanogaster EG:BACH48C10.1
           protein.
          Length = 259

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = +2

Query: 464 DSKTEVQATVAEISKKKNLVLLMQKVLPTQLPSFPTW*RRS 586
           D K E++A +A+    K+ V   +KVL ++ P +PT  ++S
Sbjct: 56  DEKREIRAALAQQQANKDAVNPTKKVLASKYPLYPTTRKQS 96


>AE014298-383|AAF45771.1|  259|Drosophila melanogaster CG14050-PA
           protein.
          Length = 259

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = +2

Query: 464 DSKTEVQATVAEISKKKNLVLLMQKVLPTQLPSFPTW*RRS 586
           D K E++A +A+    K+ V   +KVL ++ P +PT  ++S
Sbjct: 56  DEKREIRAALAQQQANKDAVNPTKKVLASKYPLYPTTRKQS 96


>AY052048-1|AAK93472.1|  537|Drosophila melanogaster LP06937p
           protein.
          Length = 537

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +3

Query: 81  KMKVLLLCIAFAAVSLAMPVAEEKDVVPAQPILEV 185
           K K+LLL +A AA+ LA  V  + + +P QP+  +
Sbjct: 2   KHKLLLLFLAGAALLLATEVRSQHEDIPYQPVSNI 36


>AE014297-2561|AAN13783.1|  537|Drosophila melanogaster CG7702-PB,
           isoform B protein.
          Length = 537

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +3

Query: 81  KMKVLLLCIAFAAVSLAMPVAEEKDVVPAQPILEV 185
           K K+LLL +A AA+ LA  V  + + +P QP+  +
Sbjct: 2   KHKLLLLFLAGAALLLATEVRSQHEDIPYQPVSNI 36


>AE014297-2560|AAF55580.1|  537|Drosophila melanogaster CG7702-PA,
           isoform A protein.
          Length = 537

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +3

Query: 81  KMKVLLLCIAFAAVSLAMPVAEEKDVVPAQPILEV 185
           K K+LLL +A AA+ LA  V  + + +P QP+  +
Sbjct: 2   KHKLLLLFLAGAALLLATEVRSQHEDIPYQPVSNI 36


>AE014297-674|AAF54169.1|  549|Drosophila melanogaster CG11094-PA,
           isoform A protein.
          Length = 549

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 419 KSADIKVEEPAAQPEDSKTEVQATVAEI 502
           K AD  +EE + + E+++ E+  TVA+I
Sbjct: 382 KDADANIEEASRRIEEARVEINRTVAQI 409


>AE014296-1304|AAN12045.1| 9196|Drosophila melanogaster CG32377-PA
            protein.
          Length = 9196

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +2

Query: 389  KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKK 511
            KSS  P+ + KS + K E+  A+P+DS   V  T   I K+
Sbjct: 6359 KSSLHPEEKPKSPEKKDEKVLAKPDDSSKSVVETDKPIPKE 6399


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,417,170
Number of Sequences: 53049
Number of extensions: 381889
Number of successful extensions: 1386
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1383
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)