Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1105
         (676 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29244-10|AAC71091.2|  908|Caenorhabditis elegans Hypothetical p...    28   7.0  
Z49126-7|CAD56566.1|  392|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z49126-6|CAA88942.2|  530|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z49126-4|CAD56565.1|  336|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z49066-3|CAD56555.1|  392|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z49066-2|CAD56554.1|  530|Caenorhabditis elegans Hypothetical pr...    27   9.2  

>U29244-10|AAC71091.2|  908|Caenorhabditis elegans Hypothetical
           protein ZK1248.10 protein.
          Length = 908

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = +1

Query: 160 TMREYWCVLQPCA--LTYYKSSSQKEQCGRIVIESTVRWKHRQETGRYSASNSSHLIGLL 333
           T R YW  L      L +YK S   +  GR+ +         +E GR+   +++ +I L 
Sbjct: 36  TRRRYWFALCDSTPYLYWYKDSDDIKCIGRVSLSGAAFTYDPREKGRFEIHSNNEVIALE 95

Query: 334 SSA 342
            S+
Sbjct: 96  CSS 98


>Z49126-7|CAD56566.1|  392|Caenorhabditis elegans Hypothetical
           protein DH11.5b protein.
          Length = 392

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -3

Query: 413 STTRDCGRLTQRRYPLEATFMILSAELKSPIRCDELEALYLPV 285
           STT D GR +Q     +   M++   L++   C+E E +  P+
Sbjct: 263 STTNDSGRGSQGHLEEKMEAMVIEEHLENDCGCEEEEEIDAPI 305


>Z49126-6|CAA88942.2|  530|Caenorhabditis elegans Hypothetical
           protein DH11.5a protein.
          Length = 530

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -3

Query: 413 STTRDCGRLTQRRYPLEATFMILSAELKSPIRCDELEALYLPV 285
           STT D GR +Q     +   M++   L++   C+E E +  P+
Sbjct: 263 STTNDSGRGSQGHLEEKMEAMVIEEHLENDCGCEEEEEIDAPI 305


>Z49126-4|CAD56565.1|  336|Caenorhabditis elegans Hypothetical
           protein DH11.5c protein.
          Length = 336

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -3

Query: 413 STTRDCGRLTQRRYPLEATFMILSAELKSPIRCDELEALYLPV 285
           STT D GR +Q     +   M++   L++   C+E E +  P+
Sbjct: 207 STTNDSGRGSQGHLEEKMEAMVIEEHLENDCGCEEEEEIDAPI 249


>Z49066-3|CAD56555.1|  392|Caenorhabditis elegans Hypothetical
           protein DH11.5b protein.
          Length = 392

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -3

Query: 413 STTRDCGRLTQRRYPLEATFMILSAELKSPIRCDELEALYLPV 285
           STT D GR +Q     +   M++   L++   C+E E +  P+
Sbjct: 263 STTNDSGRGSQGHLEEKMEAMVIEEHLENDCGCEEEEEIDAPI 305


>Z49066-2|CAD56554.1|  530|Caenorhabditis elegans Hypothetical
           protein DH11.5a protein.
          Length = 530

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -3

Query: 413 STTRDCGRLTQRRYPLEATFMILSAELKSPIRCDELEALYLPV 285
           STT D GR +Q     +   M++   L++   C+E E +  P+
Sbjct: 263 STTNDSGRGSQGHLEEKMEAMVIEEHLENDCGCEEEEEIDAPI 305


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,644,168
Number of Sequences: 27780
Number of extensions: 217857
Number of successful extensions: 640
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)