Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1104
         (476 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g48980.1 68418.m06060 kelch repeat-containing F-box family pr...    29   1.2  
At4g28130.1 68417.m04033 diacylglycerol kinase accessory domain-...    28   2.8  
At2g20900.3 68415.m02465 diacylglycerol kinase, putative contain...    28   2.8  
At2g20900.2 68415.m02464 diacylglycerol kinase, putative contain...    28   2.8  
At2g20900.1 68415.m02463 diacylglycerol kinase, putative contain...    28   2.8  

>At5g48980.1 68418.m06060 kelch repeat-containing F-box family
           protein contains F-box domain Pfam:PF00646 and Kelch
           motif Pfam:PF01344
          Length = 399

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -2

Query: 364 GLTRGHL*ICHRQQPNINGRFFTSIRSPDFEVTVFTIKAKK 242
           G T   L +C R     N R+FT  R P+  +T  T K KK
Sbjct: 79  GKTENFLYVCLRFPDEANPRWFTLYRKPNQTLTDHTTKKKK 119


>At4g28130.1 68417.m04033 diacylglycerol kinase accessory
           domain-containing protein similar to diacylglycerol
           kinase [Lycopersicon esculentum] GI:10798892; contains
           Pfam profile PF00609: Diacylglycerol kinase accessory
           domain (presumed)
          Length = 466

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 464 PPPVGQPPLSNGKNRPFQLASRQKQAG 384
           PPP+   PL  G N PF     +K  G
Sbjct: 138 PPPIATVPLGTGNNLPFAFGWGKKNPG 164


>At2g20900.3 68415.m02465 diacylglycerol kinase, putative contains
           INTERPRO domain, IPR001206, DAG-kinase catalytic domain
          Length = 491

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 464 PPPVGQPPLSNGKNRPFQLASRQKQAG 384
           PPP+   PL  G N PF     +K  G
Sbjct: 131 PPPIATVPLGTGNNLPFAFGWGKKNPG 157


>At2g20900.2 68415.m02464 diacylglycerol kinase, putative contains
           INTERPRO domain, IPR001206, DAG-kinase catalytic domain
          Length = 491

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 464 PPPVGQPPLSNGKNRPFQLASRQKQAG 384
           PPP+   PL  G N PF     +K  G
Sbjct: 131 PPPIATVPLGTGNNLPFAFGWGKKNPG 157


>At2g20900.1 68415.m02463 diacylglycerol kinase, putative contains
           INTERPRO domain, IPR001206, DAG-kinase catalytic domain
          Length = 509

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 464 PPPVGQPPLSNGKNRPFQLASRQKQAG 384
           PPP+   PL  G N PF     +K  G
Sbjct: 131 PPPIATVPLGTGNNLPFAFGWGKKNPG 157


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,026,092
Number of Sequences: 28952
Number of extensions: 199912
Number of successful extensions: 451
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 821630280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)