Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1102
         (508 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089685-1|AAL90423.1|  378|Drosophila melanogaster RH62264p pro...    29   4.8  
AE013599-2969|AAF57504.1|  378|Drosophila melanogaster CG11099-P...    29   4.8  
BT001296-1|AAN71051.1|  445|Drosophila melanogaster AT11054p pro...    28   6.3  
AY089403-1|AAL90141.1|  415|Drosophila melanogaster AT22836p pro...    28   6.3  
AE014297-4165|AAN14124.1|  424|Drosophila melanogaster CG31055-P...    28   6.3  
AE014297-4164|AAN14123.1|  436|Drosophila melanogaster CG31055-P...    28   6.3  
AE014297-4163|AAN14122.1|  415|Drosophila melanogaster CG31055-P...    28   6.3  

>AY089685-1|AAL90423.1|  378|Drosophila melanogaster RH62264p
           protein.
          Length = 378

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +2

Query: 80  FVRSFVRYVTMI--QFHDSDDRKACRETVVLLHTHQILWCHDSQSK*KLIIPYGT 238
           F  + + Y+ M+  +F+ +      R T V +H   + W  + ++  +L++P GT
Sbjct: 192 FHNTAINYIPMVYERFYQNFYDNRQRNTPVAVHRKGLFWVRELETSTRLLLPVGT 246


>AE013599-2969|AAF57504.1|  378|Drosophila melanogaster CG11099-PA
           protein.
          Length = 378

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +2

Query: 80  FVRSFVRYVTMI--QFHDSDDRKACRETVVLLHTHQILWCHDSQSK*KLIIPYGT 238
           F  + + Y+ M+  +F+ +      R T V +H   + W  + ++  +L++P GT
Sbjct: 192 FHNTAINYIPMVYERFYQNFYDNRQRNTPVAVHRKGLFWVRELETSTRLLLPVGT 246


>BT001296-1|AAN71051.1|  445|Drosophila melanogaster AT11054p
           protein.
          Length = 445

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 147 VGKLWYCYTHIKFCGVMIHRANK 215
           +G  WYC    K CG+ +HR  +
Sbjct: 382 IGPSWYCTMKCKSCGLHMHRTRQ 404


>AY089403-1|AAL90141.1|  415|Drosophila melanogaster AT22836p
           protein.
          Length = 415

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 147 VGKLWYCYTHIKFCGVMIHRANK 215
           +G  WYC    K CG+ +HR  +
Sbjct: 352 IGPSWYCTMKCKSCGLHMHRTRQ 374


>AE014297-4165|AAN14124.1|  424|Drosophila melanogaster CG31055-PB,
           isoform B protein.
          Length = 424

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 147 VGKLWYCYTHIKFCGVMIHRANK 215
           +G  WYC    K CG+ +HR  +
Sbjct: 361 IGPSWYCTMKCKSCGLHMHRTRQ 383


>AE014297-4164|AAN14123.1|  436|Drosophila melanogaster CG31055-PC,
           isoform C protein.
          Length = 436

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 147 VGKLWYCYTHIKFCGVMIHRANK 215
           +G  WYC    K CG+ +HR  +
Sbjct: 373 IGPSWYCTMKCKSCGLHMHRTRQ 395


>AE014297-4163|AAN14122.1|  415|Drosophila melanogaster CG31055-PA,
           isoform A protein.
          Length = 415

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 147 VGKLWYCYTHIKFCGVMIHRANK 215
           +G  WYC    K CG+ +HR  +
Sbjct: 352 IGPSWYCTMKCKSCGLHMHRTRQ 374


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,519,376
Number of Sequences: 53049
Number of extensions: 412091
Number of successful extensions: 507
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 507
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)