Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1100
         (467 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   2.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   3.3  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   4.3  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   4.3  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   7.5  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   7.5  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   7.5  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    20   9.9  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 172 RYYHKMGGWYPQIQRSP 122
           RY+   GG YP++QR P
Sbjct: 172 RYWQCQGG-YPRLQRCP 187


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 246 RQSVNGVCECIDGFH 290
           R++ N +CE +D F+
Sbjct: 223 RKNYNSICELVDAFN 237


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/34 (26%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
 Frame = -1

Query: 104 RIMRIAPLKYANS--DYTIV*LTHVASVSLIYLL 9
           +I+ IAP+ Y NS  +Y+ + +    +  +I+++
Sbjct: 18  KILGIAPISYKNSNVNYSKIGIVQTVAYFVIFII 51


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 394 CVSYPTGSVVVLYSRGWPGKL 332
           C    TG    +Y RG+PG L
Sbjct: 443 CPPKHTGKNCEIYDRGFPGGL 463


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 386 TDAWDTPAGPSPSETILTRKPGNWK 460
           T++  T A   P+E+  T+KP   K
Sbjct: 407 TESEPTQASEQPTESSTTQKPQTTK 431


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +2

Query: 389 DAWDTPAGPSPS 424
           D WDTP   +P+
Sbjct: 5   DDWDTPTSSAPA 16


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 391 RMGHTCWPF 417
           R+GH  WPF
Sbjct: 75  RLGHPQWPF 83


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 189 IWICENGTTT 160
           +WICE G  T
Sbjct: 156 VWICEMGVVT 165


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 189 IWICENGTTT 160
           +WICE G  T
Sbjct: 156 VWICEMGVVT 165


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -2

Query: 289 WKPSMH 272
           WKPSMH
Sbjct: 472 WKPSMH 477


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,884
Number of Sequences: 336
Number of extensions: 2650
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)