Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1100
         (467 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    37   3e-04
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    37   3e-04
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    37   3e-04
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   3.0  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   5.3  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   7.0  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    22   9.3  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 37.1 bits (82), Expect = 3e-04
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = -1

Query: 395 MRQLSDGQRCRVVFAWLAWQTPHLLLLDEPTNHLD 291
           ++ LS G+R R+ FA      PHLLL DEPT+ LD
Sbjct: 241 IKGLSGGERKRLAFASETLTDPHLLLCDEPTSGLD 275


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 37.1 bits (82), Expect = 3e-04
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = -1

Query: 395 MRQLSDGQRCRVVFAWLAWQTPHLLLLDEPTNHLD 291
           ++ LS G+R R+ FA      PHLLL DEPT+ LD
Sbjct: 241 IKGLSGGERKRLAFASETLTDPHLLLCDEPTSGLD 275


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 37.1 bits (82), Expect = 3e-04
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = -1

Query: 395 MRQLSDGQRCRVVFAWLAWQTPHLLLLDEPTNHLD 291
           ++ LS G+R R+ FA      PHLLL DEPT+ LD
Sbjct: 219 IKGLSGGERKRLAFASETLTDPHLLLCDEPTSGLD 253


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = -3

Query: 198 ANEIWICENGTTTKWEGGILKYKDHLKSKILKDNADSAAKIRK 70
           ++E+ +CE G    W+G  L Y D       +D   + + +RK
Sbjct: 811 SDEVPVCEPGHLKLWDGYSLLYVDGNDYPHNQDLGSAGSCVRK 853



 Score = 23.4 bits (48), Expect = 4.0
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
 Frame = -2

Query: 454 IPGFPG*---NGLTGGRASRCVPCVSYPTGSVVVLYSRGWPGK 335
           +PGFPG     G TG       PCV    G+   +  RG+ G+
Sbjct: 380 VPGFPGVKGDKGTTGLPGIPGPPCVDGLPGAAGPVGPRGYDGE 422


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -2

Query: 454 IPGFPG*NGLTGGRASRCVPC 392
           +PG  G  GL G    RC  C
Sbjct: 563 LPGAKGERGLKGELGGRCTDC 583


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2

Query: 359 QHDNAARRITDAWDTPAGPSPSETILTRK 445
           Q +   RR  D W T AG   +  + TR+
Sbjct: 864 QREETMRRWQDQWTTGAGQPGAPGLKTRR 892


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -1

Query: 446 VSGLKWSHWGKGQQVCPMRQLSDGQRCRVVFAWLAWQTPHLLLLD 312
           VS L  S  G  Q++ P+ + +   +CR  +   AW+  ++L  D
Sbjct: 235 VSFLANSPLGYVQRLLPVGRSTGQMKCREEWPSPAWEKAYVLFHD 279


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,344
Number of Sequences: 2352
Number of extensions: 11541
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40820256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)