Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1098
(500 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0093 + 702223-702348,703434-703556,703646-703702,703797-70... 96 1e-20
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 94 5e-20
07_03_1141 - 24264534-24264635,24265542-24265616,24265709-242657... 93 2e-19
12_02_0477 + 19503678-19503803,19504381-19504422,19504631-195046... 88 4e-18
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585 32 0.30
04_01_0576 + 7466032-7466802,7468382-7468444,7469043-7469122,746... 31 0.69
07_03_1343 - 25905475-25905678,25907025-25907167,25907273-259073... 30 0.91
02_05_0664 + 30717551-30719491 30 0.91
01_06_1303 - 36132588-36132710,36133879-36134103,36134318-361347... 29 1.6
11_06_0437 - 23533218-23536382 29 2.8
03_02_0360 - 7796799-7796816,7797477-7797587,7797760-7798068 29 2.8
02_01_0244 + 1603381-1603792,1604054-1604132,1604993-1605862,160... 29 2.8
03_05_0862 + 28353235-28354431 28 3.7
12_02_0329 + 17585046-17585561 28 4.8
03_06_0756 - 36032432-36033871 28 4.8
03_04_0133 + 17585278-17585282,17586257-17586386,17587444-175875... 28 4.8
01_06_1109 - 34576866-34577043,34577774-34577845,34577934-345780... 27 6.4
01_05_0423 + 22032940-22033695 27 6.4
08_02_0610 + 19307537-19308011,19308187-19310846 27 8.5
07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659 27 8.5
05_05_0230 - 23476919-23477372,23477656-23477695,23478578-234787... 27 8.5
04_04_0712 + 27476319-27476569,27477150-27477402,27477535-274779... 27 8.5
02_01_0363 - 2612873-2613814 27 8.5
02_01_0358 - 2575858-2576796 27 8.5
01_06_1300 + 36116511-36116636,36116672-36116734,36117782-361178... 27 8.5
01_06_0102 - 26447286-26448107,26448248-26448385,26448990-264493... 27 8.5
>07_01_0093 +
702223-702348,703434-703556,703646-703702,703797-703871,
704105-704212
Length = 162
Score = 96.3 bits (229), Expect = 1e-20
Identities = 41/53 (77%), Positives = 45/53 (84%)
Frame = +3
Query: 252 QTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGY 410
+TGKHGHAK H VGIDIFNGKK EDI PS+HN DVPHV R DYQL DIS+DG+
Sbjct: 50 KTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVDRTDYQLIDISEDGF 102
Score = 69.7 bits (163), Expect = 1e-12
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = +1
Query: 109 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKPESTATLKFT 285
M D E+ HFE+ D+GAS T+P Q +RKNG++++K RPCK+VE+STSK K
Sbjct: 1 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCH 60
Query: 286 WLGLISSMVKSMKISVP 336
++G+ K ++ VP
Sbjct: 61 FVGIDIFNGKKLEDIVP 77
>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 94.3 bits (224), Expect = 5e-20
Identities = 40/53 (75%), Positives = 44/53 (83%)
Frame = +3
Query: 252 QTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGY 410
+TGKHGHAK H V IDIFNGKK EDI PS+HN DVPHV R DYQL DIS+DG+
Sbjct: 1385 KTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGF 1437
Score = 53.6 bits (123), Expect = 9e-08
Identities = 22/42 (52%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +1
Query: 109 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCK 231
M D E+ HFE+ D+GAS T+P Q +RKNG +++K RPCK
Sbjct: 1323 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCK 1364
>07_03_1141 -
24264534-24264635,24265542-24265616,24265709-24265765,
24265903-24266025,24266509-24266520,24267014-24267157,
24267606-24267626
Length = 177
Score = 92.7 bits (220), Expect = 2e-19
Identities = 39/53 (73%), Positives = 44/53 (83%)
Frame = +3
Query: 252 QTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGY 410
+TGKHGHAK H V IDIFNGKK EDI PS+HN DVPHV R +YQL DIS+DG+
Sbjct: 67 KTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTEYQLIDISEDGF 119
Score = 60.9 bits (141), Expect = 6e-10
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 5/54 (9%)
Frame = +1
Query: 109 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPC----KIVEMSTSK 255
M D E+ HFE+ D+GAS T+P Q +RKNG++++K RPC K+VE+STSK
Sbjct: 14 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKGFGKVVEVSTSK 67
>12_02_0477 +
19503678-19503803,19504381-19504422,19504631-19504684,
19504946-19505068,19505154-19505210,19505299-19505373,
19505925-19506026
Length = 192
Score = 87.8 bits (208), Expect = 4e-18
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = +3
Query: 252 QTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGY 410
+TGKHGHAK H V IDIF KK EDI PS+HN DVPHV R +YQL DIS+DG+
Sbjct: 82 KTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVNRTEYQLIDISEDGF 134
Score = 55.2 bits (127), Expect = 3e-08
Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +1
Query: 109 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCK 231
M D E+ HFE+ D+GAS T+P Q +RKNG++++K RPCK
Sbjct: 1 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCK 42
>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
Length = 268
Score = 31.9 bits (69), Expect = 0.30
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +2
Query: 149 PGPQPPSPCNVRPCVKTVSLC*RVVHARLLKCPHPNRKARP 271
P PQPP PC PC K C + C P K +P
Sbjct: 81 PLPQPPPPCKPPPCEKPPEDC-KPKPCHCCSCEKPKPKPKP 120
>04_01_0576 +
7466032-7466802,7468382-7468444,7469043-7469122,
7469505-7469622,7470035-7470067,7470400-7470474,
7470887-7471043,7471142-7471230,7472041-7472294,
7472977-7473148,7473250-7473333,7473626-7473730,
7474055-7474363,7474622-7474756,7476236-7476317,
7476423-7476502,7476622-7476783,7477071-7477138,
7478422-7478502,7478634-7478760,7478816-7478879,
7480808-7480854,7481042-7481335
Length = 1149
Score = 30.7 bits (66), Expect = 0.69
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 110 WVTSKTHTSRPETPGPQPPSPCNV 181
W+T T P+ P P PP PC+V
Sbjct: 52 WLTWPPPTPLPDAPPPPPPHPCDV 75
>07_03_1343 -
25905475-25905678,25907025-25907167,25907273-25907366,
25907526-25907687,25907884-25907952,25908631-25908843,
25909054-25909113,25909294-25909382,25909745-25910063
Length = 450
Score = 30.3 bits (65), Expect = 0.91
Identities = 22/58 (37%), Positives = 23/58 (39%)
Frame = -3
Query: 492 GGGGFPPFSQTGKGSTRLVSKAIRVSRGSHHPRYQSVGSLRASRGVRPCCVWRDRYLH 319
GGGG S G RL S A S SH P G R C WRD+ LH
Sbjct: 31 GGGGAAAASNGGGVERRLRSSAASASWASHLP---------LEVGTRVMCRWRDQKLH 79
>02_05_0664 + 30717551-30719491
Length = 646
Score = 30.3 bits (65), Expect = 0.91
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3
Query: 204 RYAEGSSMQDC*NV-HIQTGK--HGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHV 365
R+ GS + C + I +G+ HG+ L+ D+ G D+ HNM++ H+
Sbjct: 362 RFTLGSGVTACARLADIDSGRAFHGYLVRRLLDTDVIQGSALVDMYGKCHNMELAHI 418
>01_06_1303 -
36132588-36132710,36133879-36134103,36134318-36134713,
36135352-36135547,36135591-36135740,36135818-36135924,
36135987-36136094,36136354-36136435,36136436-36136536,
36136778-36136996,36137455-36137583,36137665-36137742,
36137816-36137929,36138071-36138230,36139224-36139441
Length = 801
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 94 IQNTTMGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMS 246
+Q ++ D E H T +ATFPM L N + +GR CK V +S
Sbjct: 431 VQPRSIIDREAMHRGTSIFLPTATFPMFPERLAMNAMSLQQGRGCKSVTVS 481
>11_06_0437 - 23533218-23536382
Length = 1054
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 270 HAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDG 407
HA LV + I N +K DI D+ H K+E Y+L + G
Sbjct: 179 HACRKLVDLVIKNKEKTADIENKEKKADIEHKKKEPYKLAIVGTGG 224
>03_02_0360 - 7796799-7796816,7797477-7797587,7797760-7798068
Length = 145
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +2
Query: 125 THTSRPETPGPQPPSPCNVRP-CVKTVSLC*RVVHARLLKCPHP 253
T PE P PP C + P C C ++ +LL+ HP
Sbjct: 3 TAKQAPENESPPPPPHCWIYPECTLVTRSCCLLLRLKLLRHGHP 46
>02_01_0244 +
1603381-1603792,1604054-1604132,1604993-1605862,
1606019-1606276,1606675-1606834
Length = 592
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Frame = +2
Query: 149 PGPQPPSPCNVRPCVKTVS-----LC*RVVHARLLKCPHPNRKARPR*SSLGWD 295
PG +PP+P ++R +K +S L + ARL K P N + P SL W+
Sbjct: 125 PGEEPPAPLSLRDDIKNLSSGDVHLYCKACSARLTKQPLRNIEEMP---SLNWE 175
>03_05_0862 + 28353235-28354431
Length = 398
Score = 28.3 bits (60), Expect = 3.7
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = -3
Query: 453 GSTRLVSKAIRVSRGSHHPRYQSVGSLRASRGVRPCCVW 337
G TR+ + ++ + H R + + S+ + G +P C W
Sbjct: 353 GETRVCAYSLAAAAKGKHKRIEVIESIPMAEGYKPPCFW 391
>12_02_0329 + 17585046-17585561
Length = 171
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = -3
Query: 498 KKGGGGF--PPFSQTGKGSTRLVSKAIRV 418
K GGGGF P F TG G T+L + + V
Sbjct: 52 KAGGGGFAAPEFGATGSGLTQLATVIVVV 80
>03_06_0756 - 36032432-36033871
Length = 479
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -1
Query: 440 WFPRPSGFQGVAIIRDISQLVVFALHVGYVHV 345
W R G QGVA +S L V + GYV V
Sbjct: 192 WMARTRGIQGVATAVWVSDLAVAVMLAGYVLV 223
>03_04_0133 +
17585278-17585282,17586257-17586386,17587444-17587591,
17587661-17587849,17587999-17589150,17589303-17589466
Length = 595
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -1
Query: 281 NFSVAVLSGLDVDISTILHG-RPFSITKPF 195
NFS + L G +ST+ HG RP S +PF
Sbjct: 125 NFSFSSLPGSSCHLSTLDHGKRPLSDVRPF 154
>01_06_1109 -
34576866-34577043,34577774-34577845,34577934-34578079,
34578337-34578406,34578516-34578573,34578658-34578751,
34579264-34579347,34579958-34580341
Length = 361
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 480 FPPFSQTGKGSTRLVSKAIRVSRGSHHPRYQSVGSLRASR 361
+PP + G R + + S SHHPR + SL SR
Sbjct: 82 YPPHRKHGHNPLRSIFSSSSSSSSSHHPRVRLQISLPPSR 121
>01_05_0423 + 22032940-22033695
Length = 251
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 116 TSKTHTSRPETPGPQPPSPCNVRPC 190
TS T T+ P P P PP P + + C
Sbjct: 17 TSNTSTTPPPQPPPPPPPPPHPQAC 41
>08_02_0610 + 19307537-19308011,19308187-19310846
Length = 1044
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 135 EVCVFDVTHCCVLNLTTVRND 73
+VC FD+ CC L T+ ND
Sbjct: 835 DVCHFDLRTCCALPPATLEND 855
>07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659
Length = 175
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 360 HVKREDYQLTDISDDG 407
H+ R +YQL DIS+DG
Sbjct: 46 HMNRTNYQLIDISEDG 61
>05_05_0230 -
23476919-23477372,23477656-23477695,23478578-23478700,
23479114-23479151,23479289-23479674,23479875-23481053,
23481805-23481928,23482733-23482779
Length = 796
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 119 SKTHTSRPETPGPQPPSPCNVRP 187
S +SRP +PGP+P +P VRP
Sbjct: 308 SSAPSSRPSSPGPRPRAP--VRP 328
>04_04_0712 +
27476319-27476569,27477150-27477402,27477535-27477914,
27479738-27479864,27479945-27480110,27480221-27480359,
27481854-27481987,27482087-27482229,27482367-27482565,
27482688-27483010
Length = 704
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 169 PMQCSALRKNGFVMLKGRPCKIVEMSTSKPESTATLKFT 285
PM S++R G + G+ C++ ++ +P + KFT
Sbjct: 51 PMDWSSIRSKGLLPRTGKSCRLRWVNKLRPNLKSGCKFT 89
>02_01_0363 - 2612873-2613814
Length = 313
Score = 27.1 bits (57), Expect = 8.5
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 101 TQQWVTSKTHTSRPETPGPQPPSPC 175
+ +W + +P P P PPSPC
Sbjct: 96 SDKWEVGDNYLWQPLPPPPPPPSPC 120
>02_01_0358 - 2575858-2576796
Length = 312
Score = 27.1 bits (57), Expect = 8.5
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 101 TQQWVTSKTHTSRPETPGPQPPSPC 175
+ +W + +P P P PPSPC
Sbjct: 96 SDKWEVGDNYLWQPLPPPPPPPSPC 120
>01_06_1300 +
36116511-36116636,36116672-36116734,36117782-36117833,
36118144-36118224,36118651-36118775,36118831-36118934,
36119487-36119615,36119899-36121054
Length = 611
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 235 VEMSTSKPESTATLKFTWLGLISSMVKSMKIS 330
+E +T+ PES T F LG + VKS +S
Sbjct: 501 MEPATATPESFKTTSFLSLGSLDGSVKSFDVS 532
>01_06_0102 -
26447286-26448107,26448248-26448385,26448990-26449359,
26449505-26449606,26449696-26449788,26449934-26450181,
26451088-26451274,26451825-26452043,26452464-26452660,
26453545-26453875,26454099-26454457,26455141-26455240,
26455349-26455464,26455547-26455663,26455782-26455880,
26456057-26456131,26456205-26456286,26457724-26457763,
26458685-26458769,26458924-26459055
Length = 1303
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -1
Query: 392 ISQLVVFALHVGYVHVVCGGTD-IFILFTIEDINPNQ 285
IS L+ F G VH+V GG+D + IL++ + I+ ++
Sbjct: 126 ISCLMTFMSAAGEVHLVSGGSDGLLILWSADHIHDSR 162
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,808,716
Number of Sequences: 37544
Number of extensions: 345670
Number of successful extensions: 1376
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1360
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1059318940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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