Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1095
(477 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 126 1e-29
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 126 1e-29
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 126 1e-29
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 126 1e-29
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 126 1e-29
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 126 1e-29
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 126 1e-29
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 126 1e-29
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 126 1e-29
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 126 1e-29
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 125 1e-29
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 105 1e-23
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 105 1e-23
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 104 3e-23
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 104 3e-23
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 72 2e-13
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 58 3e-09
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 55 3e-08
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 36 0.011
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 36 0.011
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 33 0.080
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 29 1.3
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 4.0
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 5.3
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 5.3
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 5.3
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 5.3
Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical pr... 27 7.0
AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear recep... 27 7.0
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical pr... 27 9.2
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 126 bits (303), Expect = 1e-29
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = +1
Query: 253 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPPKVLL 432
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE P +
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 433 QPL 441
PL
Sbjct: 109 APL 111
Score = 105 bits (253), Expect = 1e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +2
Query: 110 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 262
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 126 bits (303), Expect = 1e-29
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = +1
Query: 253 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPPKVLL 432
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE P +
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 433 QPL 441
PL
Sbjct: 109 APL 111
Score = 104 bits (250), Expect = 3e-23
Identities = 46/51 (90%), Positives = 50/51 (98%)
Frame = +2
Query: 110 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 262
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 126 bits (303), Expect = 1e-29
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = +1
Query: 253 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPPKVLL 432
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE P +
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 433 QPL 441
PL
Sbjct: 109 APL 111
Score = 105 bits (253), Expect = 1e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +2
Query: 110 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 262
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 126 bits (303), Expect = 1e-29
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = +1
Query: 253 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPPKVLL 432
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE P +
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 433 QPL 441
PL
Sbjct: 109 APL 111
Score = 105 bits (253), Expect = 1e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +2
Query: 110 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 262
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 126 bits (303), Expect = 1e-29
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = +1
Query: 253 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPPKVLL 432
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE P +
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 433 QPL 441
PL
Sbjct: 109 APL 111
Score = 105 bits (253), Expect = 1e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +2
Query: 110 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 262
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 126 bits (303), Expect = 1e-29
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = +1
Query: 253 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPPKVLL 432
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE P +
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 433 QPL 441
PL
Sbjct: 109 APL 111
Score = 103 bits (246), Expect = 9e-23
Identities = 44/51 (86%), Positives = 50/51 (98%)
Frame = +2
Query: 110 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 262
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 126 bits (303), Expect = 1e-29
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = +1
Query: 253 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPPKVLL 432
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE P +
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 433 QPL 441
PL
Sbjct: 109 APL 111
Score = 105 bits (253), Expect = 1e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +2
Query: 110 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 262
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 126 bits (303), Expect = 1e-29
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = +1
Query: 253 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPPKVLL 432
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE P +
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 64
Query: 433 QPL 441
PL
Sbjct: 65 APL 67
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 126 bits (303), Expect = 1e-29
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = +1
Query: 253 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPPKVLL 432
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE P +
Sbjct: 35 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 94
Query: 433 QPL 441
PL
Sbjct: 95 APL 97
Score = 67.3 bits (157), Expect = 5e-12
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +2
Query: 164 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 262
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 37
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 126 bits (303), Expect = 1e-29
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = +1
Query: 253 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPPKVLL 432
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE P +
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 433 QPL 441
PL
Sbjct: 109 APL 111
Score = 105 bits (253), Expect = 1e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +2
Query: 110 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 262
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 125 bits (302), Expect = 1e-29
Identities = 55/63 (87%), Positives = 57/63 (90%)
Frame = +1
Query: 253 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPPKVLL 432
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEE P +
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTE 107
Query: 433 QPL 441
PL
Sbjct: 108 APL 110
Score = 99.5 bits (237), Expect = 1e-21
Identities = 44/49 (89%), Positives = 48/49 (97%)
Frame = +2
Query: 116 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 262
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 105 bits (253), Expect = 1e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +2
Query: 110 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 262
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 1e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +1
Query: 253 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 366
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 105 bits (253), Expect = 1e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +2
Query: 110 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 262
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 1e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +1
Query: 253 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 366
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 104 bits (250), Expect = 3e-23
Identities = 46/51 (90%), Positives = 50/51 (98%)
Frame = +2
Query: 110 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 262
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 1e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +1
Query: 253 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 366
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 104 bits (250), Expect = 3e-23
Identities = 46/51 (90%), Positives = 50/51 (98%)
Frame = +2
Query: 110 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 262
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 80.2 bits (189), Expect = 7e-16
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 253 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 357
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 72.1 bits (169), Expect = 2e-13
Identities = 29/61 (47%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Frame = +1
Query: 262 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEQPPKVLLQP 438
D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEE P + P
Sbjct: 54 DIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAP 113
Query: 439 L 441
L
Sbjct: 114 L 114
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +2
Query: 134 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 250
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 58.0 bits (134), Expect = 3e-09
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +1
Query: 238 RDGRYGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEE 411
R G KD VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKE 104
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 134 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 226
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 54.8 bits (126), Expect = 3e-08
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +1
Query: 262 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 411
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+
Sbjct: 64 DFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPED 114
Score = 36.7 bits (81), Expect = 0.009
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 110 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 217
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 36.3 bits (80), Expect = 0.011
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 226 PPSGRDGRYGQKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTF 381
P S ++ +K +V E + +L Y PIE G V NWD ++IW TF
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 36.3 bits (80), Expect = 0.011
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 226 PPSGRDGRYGQKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTF 381
P S ++ +K +V E + +L Y PIE G V NWD ++IW TF
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 33.5 bits (73), Expect = 0.080
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 119 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 217
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
Score = 29.5 bits (63), Expect = 1.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 322 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEQP 417
++ G++ +W+ EKI H++ N L P E P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHP 125
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 343 NWDDMEKIWHHTFYNELRVAPEEQPPKVLLQPLGRAFPPSK 465
+++D++ IWHH Y E ++ ++ V L R FP K
Sbjct: 172 HYNDLQDIWHHARYKESQLKRGKELNPVEKYRLRRKFPAPK 212
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 4.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 164 KAGFAGDDAPRAVFPSIVGRPRHQG 238
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 189 ASSPAKPALHIPEPLSTTNAATSS 118
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 189 ASSPAKPALHIPEPLSTTNAATSS 118
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 189 ASSPAKPALHIPEPLSTTNAATSS 118
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 189 ASSPAKPALHIPEPLSTTNAATSS 118
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical
protein C28D4.1 protein.
Length = 437
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 295 FCSVPHLLHKSPSVHTDHHALMAGPSHDRGEHGARSIISCE 173
F SV + ++PS +D L+ G H + +GA S C+
Sbjct: 5 FNSVSKIQWRNPSPVSDTSCLVCGDPHGKRHYGAMSCNGCK 45
>AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear receptor
NHR-100 protein.
Length = 437
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 295 FCSVPHLLHKSPSVHTDHHALMAGPSHDRGEHGARSIISCE 173
F SV + ++PS +D L+ G H + +GA S C+
Sbjct: 5 FNSVSKIQWRNPSPVSDTSCLVCGDPHGKRHYGAMSCNGCK 45
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 26.6 bits (56), Expect = 9.2
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Frame = -2
Query: 371 CQIFSMSSQLVTIPC-SMGYLRVRIPL----LLCASSPT*ESFCPYRPSRPDG 228
CQ+FS QLVT+ SMG +++++ + LL + S T + P P DG
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAP-NPPEIDG 302
>Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical
protein F54D1.6 protein.
Length = 1423
Score = 26.6 bits (56), Expect = 9.2
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +1
Query: 316 YPIEHGIVTNWDDMEKIWHHTFYNELRVAP----EEQPPKVLLQPL 441
Y +E + +W+ ++H+ F L++AP +EQ P+ LL L
Sbjct: 559 YQVEQWYMNDWERQNDLYHYRF-GYLKLAPLKTNQEQNPQQLLSGL 603
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,912,116
Number of Sequences: 27780
Number of extensions: 303727
Number of successful extensions: 1088
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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