Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1095
(477 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 123 7e-29
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 123 7e-29
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 122 1e-28
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 122 1e-28
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 122 1e-28
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 122 1e-28
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 120 7e-28
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 120 7e-28
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 120 7e-28
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 109 7e-25
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 99 1e-21
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 95 2e-20
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 65 2e-11
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 57 5e-09
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 57 7e-09
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 54 4e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 43 1e-04
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 33 0.076
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 33 0.13
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 2.0
At5g07320.1 68418.m00836 mitochondrial substrate carrier family ... 29 2.2
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 29 2.2
At1g71850.1 68414.m08303 expressed protein ; expression supporte... 28 2.8
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 2.8
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 2.8
At5g01730.1 68418.m00091 expressed protein 28 3.8
At4g10350.1 68417.m01700 no apical meristem (NAM) family protein... 28 3.8
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 3.8
At5g08230.1 68418.m00965 PWWP domain-containing protein putative... 27 5.0
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 5.0
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 27 5.0
At5g17960.1 68418.m02106 DC1 domain-containing protein contains ... 27 6.6
At5g01400.1 68418.m00053 expressed protein contains low similari... 27 6.6
At3g58650.1 68416.m06537 expressed protein 27 6.6
At3g45240.1 68416.m04882 protein kinase family protein contains ... 27 6.6
At3g43230.1 68416.m04563 zinc finger (FYVE type) family protein ... 27 6.6
At2g25680.1 68415.m03078 expressed protein ; expression supporte... 27 6.6
At3g54140.1 68416.m05985 proton-dependent oligopeptide transport... 27 8.7
At1g54215.1 68414.m06180 proline-rich family protein contains pr... 27 8.7
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 123 bits (296), Expect = 7e-29
Identities = 54/63 (85%), Positives = 57/63 (90%)
Frame = +1
Query: 253 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPPKVLL 432
GQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEE P +
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 433 QPL 441
PL
Sbjct: 110 APL 112
Score = 83.8 bits (198), Expect = 5e-17
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +2
Query: 119 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 262
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGM ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 123 bits (296), Expect = 7e-29
Identities = 54/63 (85%), Positives = 57/63 (90%)
Frame = +1
Query: 253 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPPKVLL 432
GQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEE P +
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 433 QPL 441
PL
Sbjct: 110 APL 112
Score = 83.8 bits (198), Expect = 5e-17
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +2
Query: 119 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 262
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGM ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 122 bits (295), Expect = 1e-28
Identities = 54/63 (85%), Positives = 56/63 (88%)
Frame = +1
Query: 253 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPPKVLL 432
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEE P +
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 433 QPL 441
PL
Sbjct: 110 APL 112
Score = 83.8 bits (198), Expect = 5e-17
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +2
Query: 119 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 262
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGM ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 122 bits (295), Expect = 1e-28
Identities = 54/63 (85%), Positives = 56/63 (88%)
Frame = +1
Query: 253 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPPKVLL 432
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEE P +
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 433 QPL 441
PL
Sbjct: 110 APL 112
Score = 83.8 bits (198), Expect = 5e-17
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +2
Query: 119 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 262
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGM ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 122 bits (294), Expect = 1e-28
Identities = 54/63 (85%), Positives = 56/63 (88%)
Frame = +1
Query: 253 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPPKVLL 432
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEE P +
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 433 QPL 441
PL
Sbjct: 110 APL 112
Score = 83.8 bits (198), Expect = 5e-17
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +2
Query: 119 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 262
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGM ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 122 bits (294), Expect = 1e-28
Identities = 54/63 (85%), Positives = 56/63 (88%)
Frame = +1
Query: 253 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPPKVLL 432
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEE P +
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 433 QPL 441
PL
Sbjct: 110 APL 112
Score = 83.8 bits (198), Expect = 5e-17
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +2
Query: 119 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 262
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGM ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 120 bits (288), Expect = 7e-28
Identities = 51/62 (82%), Positives = 56/62 (90%)
Frame = +1
Query: 256 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPPKVLLQ 435
QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEE P +
Sbjct: 51 QKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEA 110
Query: 436 PL 441
PL
Sbjct: 111 PL 112
Score = 82.6 bits (195), Expect = 1e-16
Identities = 34/48 (70%), Positives = 43/48 (89%)
Frame = +2
Query: 119 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 262
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM+++
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 120 bits (288), Expect = 7e-28
Identities = 51/62 (82%), Positives = 56/62 (90%)
Frame = +1
Query: 256 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPPKVLLQ 435
QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEE P +
Sbjct: 51 QKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEA 110
Query: 436 PL 441
PL
Sbjct: 111 PL 112
Score = 82.6 bits (195), Expect = 1e-16
Identities = 34/48 (70%), Positives = 43/48 (89%)
Frame = +2
Query: 119 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 262
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM+++
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 120 bits (288), Expect = 7e-28
Identities = 51/62 (82%), Positives = 56/62 (90%)
Frame = +1
Query: 256 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPPKVLLQ 435
QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEE P +
Sbjct: 51 QKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEA 110
Query: 436 PL 441
PL
Sbjct: 111 PL 112
Score = 82.6 bits (195), Expect = 1e-16
Identities = 34/48 (70%), Positives = 43/48 (89%)
Frame = +2
Query: 119 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 262
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM+++
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 109 bits (263), Expect = 7e-25
Identities = 45/62 (72%), Positives = 55/62 (88%)
Frame = +1
Query: 256 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPPKVLLQ 435
+KD++VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEE P +
Sbjct: 52 EKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEA 111
Query: 436 PL 441
PL
Sbjct: 112 PL 113
Score = 86.2 bits (204), Expect = 1e-17
Identities = 37/48 (77%), Positives = 43/48 (89%)
Frame = +2
Query: 119 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 262
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGMD +
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEK 53
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 99.1 bits (236), Expect = 1e-21
Identities = 40/62 (64%), Positives = 52/62 (83%)
Frame = +1
Query: 256 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPPKVLLQ 435
+ D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEE P +
Sbjct: 6 ENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEA 65
Query: 436 PL 441
PL
Sbjct: 66 PL 67
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/60 (70%), Positives = 47/60 (78%)
Frame = +1
Query: 238 RDGRYGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQP 417
RDG +SYVG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEE P
Sbjct: 35 RDG-LNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +2
Query: 134 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 229
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 65.3 bits (152), Expect = 2e-11
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +1
Query: 259 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 411
KD VG+ R L + YP+ +GIV NWDDME +W H FYNEL++ P +
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSD 101
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 134 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 226
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 57.2 bits (132), Expect = 5e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +2
Query: 119 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 220
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
Score = 49.2 bits (112), Expect = 1e-06
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 241 DGRYGQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQP 417
D G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P E P
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Query: 418 PKVLLQPL 441
+ PL
Sbjct: 121 MLLAEPPL 128
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 56.8 bits (131), Expect = 7e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +2
Query: 119 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 220
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 48.0 bits (109), Expect = 3e-06
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +1
Query: 268 YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPPKVLLQPL 441
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P E P + PL
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPL 134
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 54.4 bits (125), Expect = 4e-08
Identities = 27/53 (50%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Frame = +1
Query: 262 DSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 411
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPED 119
Score = 35.9 bits (79), Expect = 0.014
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 131 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 217
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 42.7 bits (96), Expect = 1e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 134 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 235
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.5 bits (73), Expect = 0.076
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = -1
Query: 369 PNLLHVIPVSDDSVFDGVFEGQDT--SFALCLISYIRVL-LSIPTITP*WRGLPTIEGNT 199
P L V+ ++ D + + + + YI + + P I P RGL +G T
Sbjct: 249 PYLTDVMILTPGQTVDALLTADQAIGKYYMATLPYISAIGIPTPDIKP-TRGLIVYQGAT 307
Query: 198 ARGASSPAKPALHIPEPLSTTNAATSS 118
+ +SSPA+P + +P +ST + TS+
Sbjct: 308 S--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 32.7 bits (71), Expect = 0.13
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 134 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 226
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
Score = 31.1 bits (67), Expect = 0.40
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 310 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPPKVLLQPL 441
++ PI+ G + N D +IW H F + L +AP + PL
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPL 104
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect(2) = 2.0
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -1
Query: 231 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 145
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 21.0 bits (42), Expect(2) = 2.0
Identities = 7/34 (20%), Positives = 21/34 (61%)
Frame = -1
Query: 441 QRLKQDLWGLFLGGDTQLIVEGMMPNLLHVIPVS 340
+++ D+ G+ +GG + + E ++ ++ +P+S
Sbjct: 10 RKITDDVDGVGVGGGLESLPEDIIADIFSRLPIS 43
>At5g07320.1 68418.m00836 mitochondrial substrate carrier family
protein similar to peroxisomal Ca-dependent solute
carrier [Oryctolagus cuniculus] GI:2352427
(mitochondrial carrier superfamily); contains
INTERPRO:IPR001993 Mitochondrial substrate carrier
family, INTERPRO:IPR002048 calcium-binding EF-hand
domain
Length = 479
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -1
Query: 459 RGESPSQRLKQDLWGLFLGGDTQLIVEGMMPNLLHVIPVSDDSVFDGVFEGQDTSFAL 286
+ +S +KQ+ G + G++PNLL V+P + S+ V+E + AL
Sbjct: 423 QADSSKTTMKQEFMNTMKGEGLRGFYRGLLPNLLKVVPAA--SITYIVYEAMKKNMAL 478
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 28.7 bits (61), Expect = 2.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 319 PIEHGIVTNWDDMEKIWHHTFYNEL 393
PIE G++ +WD ME + + Y L
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGL 81
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 131 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 223
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g71850.1 68414.m08303 expressed protein ; expression supported
by MPSS
Length = 470
Score = 28.3 bits (60), Expect = 2.8
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 208 LDRGKAPPSGRDGRYGQKDSYVGDEAQSKRGILTLK 315
L+RG+ S R GR +S D+AQS+R ++LK
Sbjct: 426 LERGRRNSSPRSGRRSFGNSGSRDKAQSRRSKISLK 461
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +1
Query: 277 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 405
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +1
Query: 277 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 405
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At5g01730.1 68418.m00091 expressed protein
Length = 1192
Score = 27.9 bits (59), Expect = 3.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 379 FYNELRVAPEEQPPKVLLQPLGRAFPPSKP 468
F N LR +PEE +L + RA P SKP
Sbjct: 436 FSNVLRHSPEEGESSLLCTDIQRASPESKP 465
>At4g10350.1 68417.m01700 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
nap gene, Arabidopsis thaliana, gb:AJ222713
Length = 341
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -3
Query: 283 PHLLHKSPSVHTDHHALMAGPSHDRGEHGARSIISCETGL 164
P + HK PS+ D+ + +A S G + +CE GL
Sbjct: 227 PPIFHKPPSLGFDYSSGLARDSESAASEGLQYQQACEPGL 266
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -2
Query: 365 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 276
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At5g08230.1 68418.m00965 PWWP domain-containing protein putative
transcription factor (HUA2) - Arabidopsis thaliana,
EMBL:AF116556
Length = 1445
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 403 PEEQPPKVLLQPLGRAFPPSKPPQ 474
P E PP QP PPS PPQ
Sbjct: 1129 PHESPPSPPPQPPSSPPPPSSPPQ 1152
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 231 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 109
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -1
Query: 357 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLS 253
HVIPV+ + +F+ QD FA ++Y + +LS
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILS 138
>At5g17960.1 68418.m02106 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 599
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 416 GCSSGATRSSL*-KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*ESF 258
GC G T++ L C+ +S+ + TIP + Y + PL LC T + +
Sbjct: 454 GCKRGLTKNRLQCSTLCE-YSICYECATIPSELHYKYDKHPLTLCYGEDTDDKY 506
>At5g01400.1 68418.m00053 expressed protein contains low similarity to
symplekin SP:Q92797 from [Homo sapiens]
Length = 1467
Score = 27.1 bits (57), Expect = 6.6
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = -1
Query: 285 CLISYIRVLLSIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 118
CL Y + + I R + + N + AS P K A+H+ P+ +SS
Sbjct: 930 CLSLYFALCTKVLRIFTILRLMTNLVFNIYKNASDPVKQAIHLQIPILVRTMGSSS 985
>At3g58650.1 68416.m06537 expressed protein
Length = 723
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +1
Query: 202 VPLDRGKAPPSGRDGRYGQKDSYVGDEAQSKRGILTLK--YPIEHGIVTNWDDMEK 363
+PL R K+ P + R G ++S + ++ + KRG ++K I+ T+ DD ++
Sbjct: 308 LPLSRKKSLPRSKKPRNGVQESGIYEDKRIKRGEKSIKCNISIDGDSSTSKDDQKR 363
>At3g45240.1 68416.m04882 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 396
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +1
Query: 211 DRGKAPPSGRDGRYGQKDSYVGDEAQSKRGILTLKYPIEHGIV 339
D G+ G D G+++ V + ++SKR LK +++G+V
Sbjct: 39 DSGETSNPGGDDEEGEEEEEVEELSRSKRSEEILKCKLQNGLV 81
>At3g43230.1 68416.m04563 zinc finger (FYVE type) family protein
contains Pfam domain PF01363: FYVE zinc finger
Length = 485
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Frame = +2
Query: 392 CVSPPR---NNPQRSCFNLWEGLSPLQ 463
C+ P R NPQR C + +E L PLQ
Sbjct: 214 CLMPSRFRERNPQRVCDSCYERLDPLQ 240
>At2g25680.1 68415.m03078 expressed protein ; expression supported
by MPSS
Length = 456
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -1
Query: 417 GLFLGGDTQLI-VEGMMPNLLHVIPVSDDSVFDGVFEGQDTSFALCLISYIR 265
G+ GG ++ + G+M + ++IP+S V G+ Q +FA+ + YIR
Sbjct: 114 GICTGGILFVLGISGLMQLVFNIIPLS---VVRGIQLSQGLAFAMSAVKYIR 162
>At3g54140.1 68416.m05985 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 570
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -1
Query: 336 DSVFDGVFEGQDTSFALCLISYIRVLLSIPTITP*W 229
+S D + +G+ + LC ++ + L SI T+ P W
Sbjct: 301 ESQSDSIKDGEVNPWRLCSVTQVEELKSIITLLPVW 336
>At1g54215.1 68414.m06180 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 169
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 397 VAPEEQPPKVLLQPLGRAFPPSKPPQK 477
+ P PP QP R+ PP KPPQK
Sbjct: 85 IKPLSSPPPP--QPPPRSQPPPKPPQK 109
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,434,107
Number of Sequences: 28952
Number of extensions: 293456
Number of successful extensions: 936
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 821630280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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