Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1094
(471 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g28490.1 68417.m04076 leucine-rich repeat transmembrane prote... 33 0.13
At3g02130.1 68416.m00180 leucine-rich repeat transmembrane prote... 29 1.2
At2g33050.1 68415.m04053 leucine-rich repeat family protein cont... 29 1.2
At3g26500.1 68416.m03305 leucine-rich repeat family protein 29 1.6
At4g39270.2 68417.m05561 leucine-rich repeat transmembrane prote... 28 2.8
At4g39270.1 68417.m05562 leucine-rich repeat transmembrane prote... 28 2.8
At4g04220.1 68417.m00598 disease resistance family protein conta... 28 2.8
At3g11330.1 68416.m01378 leucine-rich repeat family protein 28 2.8
At1g45616.1 68414.m05200 leucine-rich repeat family protein cont... 28 2.8
At1g09910.1 68414.m01115 expressed protein 28 2.8
At4g29180.1 68417.m04175 leucine-rich repeat protein kinase, put... 28 3.7
At1g74190.1 68414.m08592 leucine-rich repeat family protein cont... 28 3.7
At4g36180.1 68417.m05148 leucine-rich repeat family protein cont... 27 4.8
At3g25020.1 68416.m03127 disease resistance family protein conta... 27 4.8
At3g24982.1 68416.m03125 leucine-rich repeat family protein, 5' ... 27 4.8
At1g58190.1 68414.m06605 leucine-rich repeat family protein cont... 27 4.8
At5g46330.1 68418.m05703 leucine-rich repeat transmembrane prote... 27 6.4
At5g25930.1 68418.m03081 leucine-rich repeat family protein / pr... 27 6.4
At4g35560.1 68417.m05053 expressed protein 27 6.4
At3g15410.1 68416.m01955 leucine-rich repeat family protein cont... 27 6.4
At5g49290.1 68418.m06100 leucine-rich repeat family protein cont... 27 8.5
>At4g28490.1 68417.m04076 leucine-rich repeat transmembrane protein
kinase, putative
Length = 999
Score = 32.7 bits (71), Expect = 0.13
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 281 NMPGLMYLNVAGNNLSDMDPDTF 349
N+P L +L ++GNNLSD P +F
Sbjct: 137 NLPNLKFLEISGNNLSDTIPSSF 159
>At3g02130.1 68416.m00180 leucine-rich repeat transmembrane protein
kinase, putative contains Pfam profile: Eukaryotic
protein kinase domain
Length = 985
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 278 KNMPGLMYLNVAGNNLSDMDPDTFXXXXXXXXXXXRNNHI 397
K M L YL++A NNL+ P +F +NH+
Sbjct: 490 KKMAALTYLSIANNNLTGQIPQSFGQLHSLDVLDLSSNHL 529
>At2g33050.1 68415.m04053 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon
esculentum] gi|3894387|gb|AAC78593
Length = 800
Score = 29.5 bits (63), Expect = 1.2
Identities = 23/72 (31%), Positives = 32/72 (44%)
Frame = +3
Query: 42 PNAFHGVHDLYAVNLSNNNLKSLHPETFAXXXXXXXXXXXXXXXXFPAAGSENYFLNASS 221
PN F + +L +++SNN +K PE F GS LN SS
Sbjct: 302 PNIFKTLQNLEHIDISNNLIKGKVPEWF-WKLPRLSIANLVNNSLTGFEGSSEVLLN-SS 359
Query: 222 VQELDVSYCNMS 257
VQ LD +Y +M+
Sbjct: 360 VQLLDFAYNSMT 371
>At3g26500.1 68416.m03305 leucine-rich repeat family protein
Length = 471
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 275 FKNMPGLMYLNVAGNNLSDMDPDTFXXXXXXXXXXXRNNHIKSLP 409
F + GL+YLN++GN+L+ + PD +N ++SLP
Sbjct: 179 FWKVVGLVYLNLSGNDLTFI-PDAISKLKKLEELDVSSNSLESLP 222
>At4g39270.2 68417.m05561 leucine-rich repeat transmembrane protein
kinase, putative receptor protein kinase erecta,
Arabidopsis thaliana
Length = 694
Score = 28.3 bits (60), Expect = 2.8
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +2
Query: 281 NMPGLMYLNVAGNNLSDMDPDT 346
++P L +L+++GN+ SDM P+T
Sbjct: 293 SLPELKFLDISGNHFSDMLPNT 314
>At4g39270.1 68417.m05562 leucine-rich repeat transmembrane protein
kinase, putative receptor protein kinase erecta,
Arabidopsis thaliana
Length = 864
Score = 28.3 bits (60), Expect = 2.8
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +2
Query: 281 NMPGLMYLNVAGNNLSDMDPDT 346
++P L +L+++GN+ SDM P+T
Sbjct: 293 SLPELKFLDISGNHFSDMLPNT 314
>At4g04220.1 68417.m00598 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-2A [Lycopersicon
pimpinellifolium] gi|3894389|gb|AAC78594
Length = 811
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 269 NTFKNMPGLMYLNVAGNNLSDMDPDTFXXXXXXXXXXXRNNHIKSLPRT 415
N F+ P L YL ++ NN S PDT NN S+P++
Sbjct: 391 NLFQR-PSLYYLVLSRNNFSGQIPDTIGESQVMVLMLSENNFSGSVPKS 438
>At3g11330.1 68416.m01378 leucine-rich repeat family protein
Length = 499
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 36 IAPNAFHGVHDLYAVNLSNNNLKSLHPETFA 128
+ P AF + L +NLSNN L+S+ P++ A
Sbjct: 212 LLPEAFGRIQGLLVLNLSNNKLESI-PDSIA 241
>At1g45616.1 68414.m05200 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to disease resistance
protein [Lycopersicon esculentum] gi|3894383|gb|AAC78591
Length = 994
Score = 28.3 bits (60), Expect = 2.8
Identities = 22/76 (28%), Positives = 31/76 (40%)
Frame = +3
Query: 18 NSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETFAXXXXXXXXXXXXXXXXFPAAGSE 197
N+ GYI P+ G+ + ++LSNNNL L P
Sbjct: 601 NNFTGYIPPSIC-GLANPLILDLSNNNLHGLIPRCLEAQMSSLSVLNLRNNSL--DGSLP 657
Query: 198 NYFLNASSVQELDVSY 245
N F+NA + LDVS+
Sbjct: 658 NIFMNAKVLSSLDVSH 673
>At1g09910.1 68414.m01115 expressed protein
Length = 675
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 36 IAPNAFHGVHDLYAVNLSNNNL 101
IA + HGV+ LYAVN+ N L
Sbjct: 621 IARHGIHGVYMLYAVNIPGNRL 642
>At4g29180.1 68417.m04175 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 911
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 48 AFHGVHDLYAVNLSNNNLKSLHPETFA 128
AF + L +++LSNNNLK + PE A
Sbjct: 429 AFRNLSLLESLDLSNNNLKGIVPEFLA 455
>At1g74190.1 68414.m08592 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.1
[Lycopersicon pimpinellifolium] gi|1184075|gb|AAC15779
Length = 965
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 42 PNAFHGVHDLYAVNLSNNNLKSLHPETFA 128
P F G+ +L A+NLS+NNL + P++ +
Sbjct: 796 PVEFGGLLELRALNLSHNNLSGVIPKSIS 824
>At4g36180.1 68417.m05148 leucine-rich repeat family protein
contains protein kinase domain, Pfam:PF00069; contains
leucine-rich repeats, Pfam:PF00560
Length = 1136
Score = 27.5 bits (58), Expect = 4.8
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 275 FKNMPGLMYLNVAGNNLSDMDPDTFXXXXXXXXXXXRNNHIK-SLP 409
F ++ L Y+N++ N+ S P TF +NHI S+P
Sbjct: 544 FSSLVSLRYVNLSSNSFSGEIPQTFGFLRLLVSLSLSDNHISGSIP 589
>At3g25020.1 68416.m03127 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon
esculentum] gi|3894387|gb|AAC78593
Length = 890
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 42 PNAFHGVHDLYAVNLSNNNLKSLHPE 119
PN F +H+L + LSNN + PE
Sbjct: 406 PNVFKTLHNLEYIALSNNRISGKFPE 431
>At3g24982.1 68416.m03125 leucine-rich repeat family protein, 5'
fragment contains leucine rich-repeat domains
Pfam:PF00560, INTERPRO:IPR001611 (19 copies); contains
similarity to GB:AAD13301 from [Lycopersicon esculentum]
Length = 681
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 42 PNAFHGVHDLYAVNLSNNNLKSLHPE 119
PN F +H+L + LSNN + PE
Sbjct: 438 PNVFKTLHNLEYIALSNNRISGKFPE 463
>At1g58190.1 68414.m06605 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.2
[Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780
Length = 1784
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 18 NSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETFA 128
N IG I P + A+NLS+N+L L PE+F+
Sbjct: 756 NELIGEI-PRELGDFQRIRALNLSHNSLSGLVPESFS 791
>At5g46330.1 68418.m05703 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1173
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 18 NSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETF 125
N+ G+I F G+ + ++NLS N+ P++F
Sbjct: 683 NNLSGHIPDEVFQGMDMIISLNLSRNSFSGEIPQSF 718
>At5g25930.1 68418.m03081 leucine-rich repeat family protein /
protein kinase family protein contains similarity to
Swiss-Prot:P47735 receptor-like protein kinase 5
precursor [Arabidopsis thaliana]; contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1005
Score = 27.1 bits (57), Expect = 6.4
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 27 IGYIAPNAFHGVHDLYAVNLSNNNLKSLHPE 119
IG I+P F + DL V+LS NNL P+
Sbjct: 223 IGEISPVVFENMTDLEHVDLSVNNLTGRIPD 253
>At4g35560.1 68417.m05053 expressed protein
Length = 917
Score = 27.1 bits (57), Expect = 6.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 292 TRHIFESICRDVLMLQYETSSSCTEEAFKK 203
T+HI IC ++ LQ+E SC + F+K
Sbjct: 467 TKHIASDICPGIISLQFE---SCIVQGFEK 493
>At3g15410.1 68416.m01955 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Hcr2-5D
[Lycopersicon esculentum] gi|3894393|gb|AAC78596;
identical to leucine-rich repeat protein [Arabidopsis
thaliana] gi|2760084|emb|CAA76000
Length = 584
Score = 27.1 bits (57), Expect = 6.4
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2
Query: 278 KNMPGLMYLNVAGNNLSDMDPD 343
KNM L +L+++ NN+S + P+
Sbjct: 519 KNMTSLKHLDISNNNISSLPPE 540
>At5g49290.1 68418.m06100 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.2
[Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780
Length = 888
Score = 26.6 bits (56), Expect = 8.5
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +3
Query: 60 VHDLYAVNLSNNNLKSLHPETFA---XXXXXXXXXXXXXXXXFPAAGSENYFLNASSVQE 230
VH+L ++ S NN+ L P+ F FP++ E Y ++
Sbjct: 368 VHNLQVLDFSENNIGGLFPDNFGRVLPNLVHMNGSNNGFQGNFPSSMGEMY-----NISF 422
Query: 231 LDVSYCNMS 257
LD+SY N+S
Sbjct: 423 LDLSYNNLS 431
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,454,493
Number of Sequences: 28952
Number of extensions: 162854
Number of successful extensions: 581
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 801831960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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