Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1093
         (462 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.45 
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   1.4  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   2.4  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   2.4  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   2.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   3.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   4.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   4.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   4.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   4.2  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   7.4  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   7.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.4  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   7.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   7.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.45
 Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
 Frame = +1

Query: 361  RRFGIIPSTMS---CVSPPRETTPSP 429
            R  G+IP   S   C  PP   TP+P
Sbjct: 989  RGLGLIPDNPSREDCTKPPEPVTPAP 1014


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 208 GTRREEHHLLRNRP 167
           G R+  HHL++N+P
Sbjct: 82  GVRKVLHHLIKNKP 95


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 208 GTRREEHHLLRNRP 167
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 208 GTRREEHHLLRNRP 167
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 305 PDPQIPHRTRNRH 343
           PD  +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 99  KLVRCRCDKMKIKRPAVTANREKQIP 22
           K  R   D+ ++ RPA  ANR    P
Sbjct: 330 KRPRPNIDRHEVTRPAAPANRGNGFP 355


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +1

Query: 343  LTGMTWRRFGIIPSTMSCVSPPRETTPSPASKPLRG--LPP 459
            L+ M + + G+IP  ++  S  + ++ S    PL+G  +PP
Sbjct: 1073 LSKMHFVKDGVIPDPVALKSAQQGSSSSSEGVPLKGTAVPP 1113


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 374 MPNLLHVIPVSDDSVFD 324
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 374 MPNLLHVIPVSDDSVFD 324
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 374 MPNLLHVIPVSDDSVFD 324
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 374 MPNLLHVIPVSDDSVFD 324
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -3

Query: 262 FCPYRPSRPDGGAFPRSRGTRR 197
           +C     RP  G  PR+R  ++
Sbjct: 195 YCTRYSDRPSSGRSPRTRRVKK 216


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 210 LDRGKAPPSGRD 245
           LDRGK  P G++
Sbjct: 49  LDRGKCSPDGQE 60


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +3

Query: 360 EKIWHHTFYNELRVAPEGNNPQSCFKTLEGASPP 461
           E ++    YN   VAP G++  S    +   +PP
Sbjct: 504 EDLFAPNTYNRHLVAPNGDHVISLIDEISYMAPP 537


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 210 LDRGKAPPSGRD 245
           LDRGK  P G++
Sbjct: 49  LDRGKCSPDGQE 60


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 415 TTPSPASKPL 444
           TTPSP++ PL
Sbjct: 266 TTPSPSASPL 275


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,714
Number of Sequences: 336
Number of extensions: 2913
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)