Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1093
(462 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 120 7e-28
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 120 7e-28
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 120 7e-28
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 120 7e-28
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 120 7e-28
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 120 7e-28
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 120 7e-28
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 120 7e-28
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 120 7e-28
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 120 7e-28
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 119 9e-28
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 105 1e-23
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 105 1e-23
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 104 3e-23
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 104 3e-23
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 66 9e-12
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 56 1e-08
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 54 5e-08
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 36 0.011
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 36 0.011
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 33 0.075
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 30 0.93
U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical p... 28 3.7
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 3.7
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 4.9
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 4.9
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 4.9
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 4.9
Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical pr... 27 6.5
AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear recep... 27 6.5
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 120 bits (288), Expect = 7e-28
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100
Score = 105 bits (253), Expect = 1e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 120 bits (288), Expect = 7e-28
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100
Score = 104 bits (250), Expect = 3e-23
Identities = 46/51 (90%), Positives = 50/51 (98%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 120 bits (288), Expect = 7e-28
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100
Score = 105 bits (253), Expect = 1e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 120 bits (288), Expect = 7e-28
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100
Score = 105 bits (253), Expect = 1e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 120 bits (288), Expect = 7e-28
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100
Score = 105 bits (253), Expect = 1e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 120 bits (288), Expect = 7e-28
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100
Score = 103 bits (246), Expect = 8e-23
Identities = 44/51 (86%), Positives = 50/51 (98%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 120 bits (288), Expect = 7e-28
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100
Score = 105 bits (253), Expect = 1e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 120 bits (288), Expect = 7e-28
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 56
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 120 bits (288), Expect = 7e-28
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 35 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 86
Score = 67.3 bits (157), Expect = 5e-12
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1
Query: 166 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 37
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 120 bits (288), Expect = 7e-28
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100
Score = 105 bits (253), Expect = 1e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 119 bits (287), Expect = 9e-28
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPE 99
Score = 99.5 bits (237), Expect = 1e-21
Identities = 44/49 (89%), Positives = 48/49 (97%)
Frame = +1
Query: 118 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 105 bits (253), Expect = 1e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 1e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 368
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 105 bits (253), Expect = 1e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 1e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 368
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 104 bits (250), Expect = 3e-23
Identities = 46/51 (90%), Positives = 50/51 (98%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 1e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 368
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 104 bits (250), Expect = 3e-23
Identities = 46/51 (90%), Positives = 50/51 (98%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 80.2 bits (189), Expect = 7e-16
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 359
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 66.5 bits (155), Expect = 9e-12
Identities = 25/50 (50%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Frame = +3
Query: 264 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 410
D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PE
Sbjct: 54 DIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPE 103
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +1
Query: 136 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 252
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 56.0 bits (129), Expect = 1e-08
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = +3
Query: 240 RDGRYGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 383
R G KD VG+E R +L + YP+++GIV NWDDM +W HTF
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTF 93
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 136 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 228
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 54.0 bits (124), Expect = 5e-08
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 264 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE
Sbjct: 64 DFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPE 113
Score = 36.7 bits (81), Expect = 0.008
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 219
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 36.3 bits (80), Expect = 0.011
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 228 PPSGRDGRYGQKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTF 383
P S ++ +K +V E + +L Y PIE G V NWD ++IW TF
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 36.3 bits (80), Expect = 0.011
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 228 PPSGRDGRYGQKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTF 383
P S ++ +K +V E + +L Y PIE G V NWD ++IW TF
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 33.5 bits (73), Expect = 0.075
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 219
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 29.9 bits (64), Expect = 0.93
Identities = 15/23 (65%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +1
Query: 397 VSPPRETTPSPA-SKPLRGLPPL 462
VSPPRE TP P S P+R L PL
Sbjct: 2817 VSPPREETPEPTPSPPVRLLRPL 2839
>U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical
protein R144.2a protein.
Length = 823
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 361 RRFGIIPSTMSCVSPPRETTPSPASKPLRGL 453
R I+P+ S PR TP PA+ P+ G+
Sbjct: 565 RTRNILPAPARSPSSPRNQTPPPANLPIPGM 595
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 3.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 166 KAGFAGDDAPRAVFPSIVGRPRHQG 240
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 191 ASSPAKPALHIPEPLSTTNAATSS 120
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 191 ASSPAKPALHIPEPLSTTNAATSS 120
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 191 ASSPAKPALHIPEPLSTTNAATSS 120
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 191 ASSPAKPALHIPEPLSTTNAATSS 120
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical
protein C28D4.1 protein.
Length = 437
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 297 FCSVPHLLHKSPSVHTDHHALMAGPSHDRGEHGARSIISCE 175
F SV + ++PS +D L+ G H + +GA S C+
Sbjct: 5 FNSVSKIQWRNPSPVSDTSCLVCGDPHGKRHYGAMSCNGCK 45
>AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear receptor
NHR-100 protein.
Length = 437
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 297 FCSVPHLLHKSPSVHTDHHALMAGPSHDRGEHGARSIISCE 175
F SV + ++PS +D L+ G H + +GA S C+
Sbjct: 5 FNSVSKIQWRNPSPVSDTSCLVCGDPHGKRHYGAMSCNGCK 45
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 26.6 bits (56), Expect = 8.6
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Frame = -3
Query: 373 CQIFSMSSQLVTIPC-SMGYLRVRIPL----LLCASSPT*ESFCPYRPSRPDG 230
CQ+FS QLVT+ SMG +++++ + LL + S T + P P DG
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAP-NPPEIDG 302
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,542,280
Number of Sequences: 27780
Number of extensions: 291348
Number of successful extensions: 1118
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1118
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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