Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1093
(462 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 117 4e-27
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 117 4e-27
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 116 6e-27
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 116 6e-27
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 116 6e-27
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 116 6e-27
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 113 4e-26
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 113 4e-26
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 113 4e-26
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 104 3e-23
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 93 8e-20
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 90 6e-19
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 64 3e-11
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 57 5e-09
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 57 7e-09
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 54 6e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 43 1e-04
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 33 0.071
At1g16690.2 68414.m01999 transcription factor-related similar to... 33 0.071
At1g16690.1 68414.m01998 transcription factor-related similar to... 33 0.071
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 33 0.12
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 29 1.2
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 29 1.5
At1g71850.1 68414.m08303 expressed protein ; expression supporte... 28 2.7
At4g10350.1 68417.m01700 no apical meristem (NAM) family protein... 28 3.5
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 3.5
At1g78180.1 68414.m09110 mitochondrial substrate carrier family ... 28 3.5
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 4.7
At3g13020.1 68416.m01622 hAT dimerisation domain-containing prot... 27 4.7
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 27 4.7
At5g01400.1 68418.m00053 expressed protein contains low similari... 27 6.2
At4g12470.1 68417.m01972 protease inhibitor/seed storage/lipid t... 27 6.2
At3g58650.1 68416.m06537 expressed protein 27 6.2
At3g45240.1 68416.m04882 protein kinase family protein contains ... 27 6.2
At5g25550.1 68418.m03040 leucine-rich repeat family protein / ex... 27 8.2
At3g54140.1 68416.m05985 proton-dependent oligopeptide transport... 27 8.2
At1g79020.1 68414.m09214 transcription factor-related similar to... 27 8.2
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 117 bits (281), Expect = 4e-27
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
GQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE 101
Score = 83.8 bits (198), Expect = 5e-17
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGM ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 117 bits (281), Expect = 4e-27
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
GQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE 101
Score = 83.8 bits (198), Expect = 5e-17
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGM ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 116 bits (280), Expect = 6e-27
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPE 101
Score = 83.8 bits (198), Expect = 5e-17
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGM ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 116 bits (280), Expect = 6e-27
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPE 101
Score = 83.8 bits (198), Expect = 5e-17
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGM ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 116 bits (280), Expect = 6e-27
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPE 101
Score = 83.8 bits (198), Expect = 5e-17
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGM ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 116 bits (280), Expect = 6e-27
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPE 101
Score = 83.8 bits (198), Expect = 5e-17
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGM ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 113 bits (273), Expect = 4e-26
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +3
Query: 258 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APE
Sbjct: 51 QKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPE 101
Score = 82.6 bits (195), Expect = 1e-16
Identities = 34/48 (70%), Positives = 43/48 (89%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM+++
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 113 bits (273), Expect = 4e-26
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +3
Query: 258 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APE
Sbjct: 51 QKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPE 101
Score = 82.6 bits (195), Expect = 1e-16
Identities = 34/48 (70%), Positives = 43/48 (89%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM+++
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 113 bits (273), Expect = 4e-26
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +3
Query: 258 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APE
Sbjct: 51 QKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPE 101
Score = 82.6 bits (195), Expect = 1e-16
Identities = 34/48 (70%), Positives = 43/48 (89%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM+++
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 104 bits (249), Expect = 3e-23
Identities = 41/51 (80%), Positives = 50/51 (98%)
Frame = +3
Query: 258 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
+KD++VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PE
Sbjct: 52 EKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPE 102
Score = 86.2 bits (204), Expect = 1e-17
Identities = 37/48 (77%), Positives = 43/48 (89%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGMD +
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEK 53
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 93.1 bits (221), Expect = 8e-20
Identities = 36/51 (70%), Positives = 47/51 (92%)
Frame = +3
Query: 258 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
+ D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPE
Sbjct: 6 ENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPE 56
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 90.2 bits (214), Expect = 6e-19
Identities = 40/57 (70%), Positives = 45/57 (78%)
Frame = +3
Query: 240 RDGRYGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
RDG +SYVG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PE
Sbjct: 35 RDG-LNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPE 90
Score = 52.4 bits (120), Expect = 1e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +1
Query: 136 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 231
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 64.5 bits (150), Expect = 3e-11
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = +3
Query: 261 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 407
KD VG+ R L + YP+ +GIV NWDDME +W H FYNEL++ P
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINP 99
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 136 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 228
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 57.2 bits (132), Expect = 5e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 222
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
Score = 43.6 bits (98), Expect = 7e-05
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +3
Query: 243 DGRYGQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 407
D G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDP 116
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 56.8 bits (131), Expect = 7e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 222
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 270 YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 407
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDP 122
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 53.6 bits (123), Expect = 6e-08
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = +3
Query: 264 DSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 410
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPE 118
Score = 35.9 bits (79), Expect = 0.013
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 133 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 219
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 42.7 bits (96), Expect = 1e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +1
Query: 136 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 237
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.5 bits (73), Expect = 0.071
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = -2
Query: 371 PNLLHVIPVSDDSVFDGVFEGQDT--SFALCLISYIRVL-LSIPTITP*WRGLPTIEGNT 201
P L V+ ++ D + + + + YI + + P I P RGL +G T
Sbjct: 249 PYLTDVMILTPGQTVDALLTADQAIGKYYMATLPYISAIGIPTPDIKP-TRGLIVYQGAT 307
Query: 200 ARGASSPAKPALHIPEPLSTTNAATSS 120
+ +SSPA+P + +P +ST + TS+
Sbjct: 308 S--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 33.5 bits (73), Expect = 0.071
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +3
Query: 279 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGN--NPQSCFKTLEGA 452
D A L++KY + H I + W + +IW L+ P N NP + F+ E A
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPPPVNDTNPYNVFRPREKA 228
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 33.5 bits (73), Expect = 0.071
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +3
Query: 279 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGN--NPQSCFKTLEGA 452
D A L++KY + H I + W + +IW L+ P N NP + F+ E A
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPPPVNDTNPYNVFRPREKA 228
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 32.7 bits (71), Expect = 0.12
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 136 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 228
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
Score = 31.5 bits (68), Expect = 0.29
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 312 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGNN 419
++ PI+ G + N D +IW H F + L +AP ++
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSS 96
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 379 PSTMSCVSPPRETTPSPASKPLRGLPP 459
P + C SPP+ P+P P G PP
Sbjct: 93 PKPVPCPSPPKPPAPTPKPVPPHGPPP 119
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 321 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEGNNPQSCF 434
PIE G++ +WD ME + + Y L EGN F
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLG-WEEGNEGNILF 93
Score = 27.5 bits (58), Expect = 4.7
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 133 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 225
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g71850.1 68414.m08303 expressed protein ; expression supported
by MPSS
Length = 470
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 210 LDRGKAPPSGRDGRYGQKDSYVGDEAQSKRGILTLK 317
L+RG+ S R GR +S D+AQS+R ++LK
Sbjct: 426 LERGRRNSSPRSGRRSFGNSGSRDKAQSRRSKISLK 461
>At4g10350.1 68417.m01700 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
nap gene, Arabidopsis thaliana, gb:AJ222713
Length = 341
Score = 27.9 bits (59), Expect = 3.5
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -1
Query: 285 PHLLHKSPSVHTDHHALMAGPSHDRGEHGARSIISCETGL 166
P + HK PS+ D+ + +A S G + +CE GL
Sbjct: 227 PPIFHKPPSLGFDYSSGLARDSESAASEGLQYQQACEPGL 266
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 3.5
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -3
Query: 367 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 278
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At1g78180.1 68414.m09110 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 342
Score = 27.9 bits (59), Expect = 3.5
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -2
Query: 458 GGSPLKGFEAGLGVVSLGGDTQLIVEGMMPNLLHVIPVSDDSVF 327
G + L G ++ GG L G++P+LL V+P + S F
Sbjct: 288 GKNKLNALAMGFNIIERGGIPALYA-GLLPSLLQVLPSASISYF 330
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 4.7
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 233 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 111
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At3g13020.1 68416.m01622 hAT dimerisation domain-containing protein
contains Pfam profile: PF04937 domain of unknown
function (DUF659), weak hit to PF05699: hAT family
dimerisation domain
Length = 605
Score = 27.5 bits (58), Expect = 4.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 339 VTNWDDMEKIWHHTFYNELRVAPEGNNPQSCFKT 440
+T WD ++ +W+ +N L A NP S + T
Sbjct: 444 LTLWDVIDDVWNKHLHNPLHAAGYYLNPTSFYST 477
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.5 bits (58), Expect = 4.7
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 359 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLS 255
HVIPV+ + +F+ QD FA ++Y + +LS
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILS 138
>At5g01400.1 68418.m00053 expressed protein contains low similarity to
symplekin SP:Q92797 from [Homo sapiens]
Length = 1467
Score = 27.1 bits (57), Expect = 6.2
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = -2
Query: 287 CLISYIRVLLSIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 120
CL Y + + I R + + N + AS P K A+H+ P+ +SS
Sbjct: 930 CLSLYFALCTKVLRIFTILRLMTNLVFNIYKNASDPVKQAIHLQIPILVRTMGSSS 985
>At4g12470.1 68417.m01972 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 161
Score = 27.1 bits (57), Expect = 6.2
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 379 PSTMSCVSPPRETTPSPASKPL 444
P + C PPR + PSP +P+
Sbjct: 44 PKPVQCPPPPRPSVPSPNPRPV 65
>At3g58650.1 68416.m06537 expressed protein
Length = 723
Score = 27.1 bits (57), Expect = 6.2
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +3
Query: 204 VPLDRGKAPPSGRDGRYGQKDSYVGDEAQSKRGILTLK--YPIEHGIVTNWDDMEK 365
+PL R K+ P + R G ++S + ++ + KRG ++K I+ T+ DD ++
Sbjct: 308 LPLSRKKSLPRSKKPRNGVQESGIYEDKRIKRGEKSIKCNISIDGDSSTSKDDQKR 363
>At3g45240.1 68416.m04882 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 396
Score = 27.1 bits (57), Expect = 6.2
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 213 DRGKAPPSGRDGRYGQKDSYVGDEAQSKRGILTLKYPIEHGIV 341
D G+ G D G+++ V + ++SKR LK +++G+V
Sbjct: 39 DSGETSNPGGDDEEGEEEEEVEELSRSKRSEEILKCKLQNGLV 81
>At5g25550.1 68418.m03040 leucine-rich repeat family protein /
extensin family protein similar to leucine-rich
repeat/extensin 1 (GI:13809918) [Arabidopsis thaliana];
contains Pfam PF00560: Leucine Rich Repeat domains
Length = 433
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 379 PSTMSCVSPPRETTPSPASKPLRGLPP 459
PS +S S P PSP S PL PP
Sbjct: 384 PSQISPSSQPLAPAPSPTSPPLSTPPP 410
>At3g54140.1 68416.m05985 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 570
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -2
Query: 338 DSVFDGVFEGQDTSFALCLISYIRVLLSIPTITP*W 231
+S D + +G+ + LC ++ + L SI T+ P W
Sbjct: 301 ESQSDSIKDGEVNPWRLCSVTQVEELKSIITLLPVW 336
>At1g79020.1 68414.m09214 transcription factor-related similar to
enhancer of polycomb (GI:3757890) [Drosophila
melanogaster]; similar to enhancer of polycomb
(GI:11907923) [Homo sapiens]
Length = 453
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Frame = +3
Query: 279 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEGN--NPQSCFKTLE 446
D A +L++ Y I W + K W L+ P N NP + F+ E
Sbjct: 167 DAASDVLQVLSINYGTFQAIFNYWKEKRKRWQKPILRRLQPPPPVNDTNPYNVFRPRE 224
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,038,326
Number of Sequences: 28952
Number of extensions: 279194
Number of successful extensions: 981
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 772134480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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