Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1092
         (488 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VA06 Cluster: CG31006-PA, isoform A; n=6; Diptera|Rep...    46   6e-04
UniRef50_A0C5A0 Cluster: Chromosome undetermined scaffold_15, wh...    36   0.64 
UniRef50_Q8D7H0 Cluster: Deoxycytidylate deaminase; n=1; Vibrio ...    33   2.6  
UniRef50_UPI0000F2C99F Cluster: PREDICTED: hypothetical protein;...    33   3.4  
UniRef50_Q9GNU3 Cluster: Fibrosurfin precursor; n=7; Echinoida|R...    33   3.4  
UniRef50_Q46JU7 Cluster: Putative uncharacterized protein; n=1; ...    33   4.5  
UniRef50_Q2S2L2 Cluster: NADH dehydrogenase I, L subunit; n=2; S...    33   4.5  
UniRef50_Q4N4R1 Cluster: Putative uncharacterized protein; n=1; ...    33   4.5  
UniRef50_Q6UDR4 Cluster: EMO2; n=6; Tetrapoda|Rep: EMO2 - Mus mu...    32   6.0  
UniRef50_Q5THK1 Cluster: Uncharacterized protein C22orf30; n=11;...    32   6.0  

>UniRef50_Q9VA06 Cluster: CG31006-PA, isoform A; n=6; Diptera|Rep:
           CG31006-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 521

 Score = 45.6 bits (103), Expect = 6e-04
 Identities = 16/47 (34%), Positives = 31/47 (65%)
 Frame = +1

Query: 253 IMELYFEEVFENLDRDALISRVKRKELVEYFNTVIDGCAKGQNKSDD 393
           I E +F++ FE + R+ L  R  R++++++ +++I GC+ GQN   D
Sbjct: 80  IFECFFDDTFEQISRNGLQDRQSRRDVLDHLSSIIKGCSGGQNSQTD 126


>UniRef50_A0C5A0 Cluster: Chromosome undetermined scaffold_15, whole
            genome shotgun sequence; n=4; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_15, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1818

 Score = 35.5 bits (78), Expect = 0.64
 Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
 Frame = -3

Query: 342  IFNKFLPFDSTDQSITI*IFENLFKIQFHDASICSRFIIFVVH-----LKKTYFRETLNF 178
            I+ +    D     IT+ + +N F++ F++ S C RF  + +H     +   YF +++  
Sbjct: 1451 IYKQIKKIDKNYFIITVTLIKNYFQVYFYNQSNCRRF-YYTIHRSDFVIMNKYFLDSIFP 1509

Query: 177  NDPKL*MSNFIMNLKLSRMS 118
              PK  M  F  N K + +S
Sbjct: 1510 EQPKEVMEQFFRNWKFNEIS 1529


>UniRef50_Q8D7H0 Cluster: Deoxycytidylate deaminase; n=1; Vibrio
           vulnificus|Rep: Deoxycytidylate deaminase - Vibrio
           vulnificus
          Length = 622

 Score = 33.5 bits (73), Expect = 2.6
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
 Frame = +1

Query: 223 ENYK-SAANGRIMELYFEEVFENLDR-DALISRVKRKELVEYFNTVIDGCAK-GQNKSDD 393
           E YK +  N  I + YF E+ E  D+   ++ R++     +++  V +   K G  +SDD
Sbjct: 137 EKYKDNLYNKDIYDFYFNELPEFTDKLRKILHRIQPGSFTKFYQIVGNNIRKSGTAESDD 196

Query: 394 VTCKKFLVFCQRIKK 438
               K  +F QR+ K
Sbjct: 197 YDSSKIYMFSQRVNK 211


>UniRef50_UPI0000F2C99F Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 662

 Score = 33.1 bits (72), Expect = 3.4
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +1

Query: 220 NENYKSAANGRIMELYFEEVFENLDRDALISRVKRKELVEY 342
           N+NYKS  + R +E  FEE  E       +S+ KRK ++E+
Sbjct: 561 NKNYKSPPSSRCLETIFEEPKERNGALISVSQQKRKRVLEF 601


>UniRef50_Q9GNU3 Cluster: Fibrosurfin precursor; n=7; Echinoida|Rep:
            Fibrosurfin precursor - Paracentrotus lividus (Common sea
            urchin)
          Length = 2656

 Score = 33.1 bits (72), Expect = 3.4
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +1

Query: 292  DRDALISRVKR-KELVEYFNTVIDGCAKGQNKSDDVTCKKFLVFCQRIKKSNPPN 453
            +RD L+S  +R  E+     TVIDG +   N     TC +F   C R+ KS   N
Sbjct: 1313 ERDILLSTAQRDSEIQPGTPTVIDGLSAMLNLQTAPTCSEFSHVCVRLTKSGAAN 1367


>UniRef50_Q46JU7 Cluster: Putative uncharacterized protein; n=1;
           Prochlorococcus marinus str. NATL2A|Rep: Putative
           uncharacterized protein - Prochlorococcus marinus
           (strain NATL2A)
          Length = 700

 Score = 32.7 bits (71), Expect = 4.5
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +1

Query: 217 DNENYKSAANGRIMELYFEEVFENLDRDALISRVKRKELVEY 342
           DNENY++AAN R+ E +        +R+A   R+++ + ++Y
Sbjct: 197 DNENYQAAANSRVAEAFKGNAEREKEREAEQLRIEKDKDLKY 238



 Score = 32.7 bits (71), Expect = 4.5
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +1

Query: 217 DNENYKSAANGRIMELYFEEVFENLDRDALISRVKRKELVEY 342
           DNENY++AAN R+ E +        +R+A   R+++ + ++Y
Sbjct: 303 DNENYQAAANSRVAEAFKGNAEREKEREAEQLRIEKDKDLKY 344


>UniRef50_Q2S2L2 Cluster: NADH dehydrogenase I, L subunit; n=2;
           Sphingobacteriales genera incertae sedis|Rep: NADH
           dehydrogenase I, L subunit - Salinibacter ruber (strain
           DSM 13855)
          Length = 665

 Score = 32.7 bits (71), Expect = 4.5
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +1

Query: 265 YFEEVFENLDRDALISRVKRKELVEYFNTVIDGCAKG 375
           Y++E ++ +  D+LI+ + RK L  +  TV+DG   G
Sbjct: 587 YWDEFYDEVVVDSLINGIARKGLAAFDTTVVDGAVNG 623


>UniRef50_Q4N4R1 Cluster: Putative uncharacterized protein; n=1;
           Theileria parva|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 1037

 Score = 32.7 bits (71), Expect = 4.5
 Identities = 15/60 (25%), Positives = 30/60 (50%)
 Frame = +1

Query: 214 MDNENYKSAANGRIMELYFEEVFENLDRDALISRVKRKELVEYFNTVIDGCAKGQNKSDD 393
           MD  NY+    GR++  +FEE+F +    + ++  +  +LV ++N ++       N   D
Sbjct: 680 MDLVNYRRVCRGRLLNNFFEEIFNSF--HSKLTSQRSAKLVNHYNFILKSGLLPSNSQTD 737


>UniRef50_Q6UDR4 Cluster: EMO2; n=6; Tetrapoda|Rep: EMO2 - Mus
           musculus (Mouse)
          Length = 454

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +1

Query: 220 NENYKSAANGRIMELYFEEVFENLDRDALISRVKRKELVEY 342
           N+NYKS    R +E  FEE  E       IS+ KRK ++E+
Sbjct: 345 NKNYKSPPASRCLETIFEEPKERNGTLISISQQKRKRVLEF 385


>UniRef50_Q5THK1 Cluster: Uncharacterized protein C22orf30; n=11;
            Eutheria|Rep: Uncharacterized protein C22orf30 - Homo
            sapiens (Human)
          Length = 2151

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +1

Query: 220  NENYKSAANGRIMELYFEEVFENLDRDALISRVKRKELVEY 342
            N+NYKS    R +E  FEE  E       IS+ KRK ++E+
Sbjct: 2050 NKNYKSPPANRCLETIFEEPKERNGTLISISQQKRKRVLEF 2090


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 460,556,416
Number of Sequences: 1657284
Number of extensions: 8435746
Number of successful extensions: 20516
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20511
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28019067077
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)