Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1092
         (488 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    22   3.4  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   3.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   4.5  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   4.5  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   4.5  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   4.5  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   4.5  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   7.9  

>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = +2

Query: 359 TAVLKDRISQTM*HAKSFWFSVSELKKVTHQTEFRGKKKI 478
           T V  D +     +  +FW      + VT +TE+  +K +
Sbjct: 305 TVVFLDDMKVPYMYEDTFWIGYDNEQSVTIKTEYAKEKNL 344


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory
          receptor candidate 54 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 24 LQKGFQFVSKKLD 62
          L K FQF+ KKL+
Sbjct: 49 LNKNFQFIDKKLN 61


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 4/28 (14%)
 Frame = +1

Query: 244 NGRIMELYFEEV----FENLDRDALISR 315
           +G + ELY   +    F NLD+DA I R
Sbjct: 313 SGCLCELYMAFMDRLYFSNLDKDAFIHR 340


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 5/13 (38%), Positives = 12/13 (92%)
 Frame = -3

Query: 288 IFENLFKIQFHDA 250
           ++E++FK++ H+A
Sbjct: 84  VYESIFKVEVHEA 96


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 5/13 (38%), Positives = 12/13 (92%)
 Frame = -3

Query: 288 IFENLFKIQFHDA 250
           ++E++FK++ H+A
Sbjct: 244 VYESIFKVEVHEA 256


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 5/13 (38%), Positives = 12/13 (92%)
 Frame = -3

Query: 288 IFENLFKIQFHDA 250
           ++E++FK++ H+A
Sbjct: 244 VYESIFKVEVHEA 256


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 406 KFLVFCQRIKKSNPPNRIPGEKKNS 480
           K L    +I++  PP+  P EKK S
Sbjct: 113 KMLTGFGKIEQVLPPHHAPEEKKRS 137


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = +1

Query: 223 ENYKSAANGRIMELYFEEVFENLDRDAL 306
           EN+     GR  ++  +EVF     D +
Sbjct: 112 ENFVDFFQGREQDVEIKEVFSRFSNDVI 139


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,066
Number of Sequences: 336
Number of extensions: 2589
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)