Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1092
         (488 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY047558-1|AAK77290.1|  445|Drosophila melanogaster GH07253p pro...    46   4e-05
AE014297-4711|AAF57120.2|  445|Drosophila melanogaster CG31006-P...    46   4e-05
AE014297-4710|AAF57122.3|  521|Drosophila melanogaster CG31006-P...    46   4e-05
AF254373-1|AAK53539.1| 2497|Drosophila melanogaster DOMINO B pro...    28   6.0  
AF076776-1|AAF82185.1| 3201|Drosophila melanogaster helicase DOM...    28   6.0  
AE013599-3190|AAM70872.2| 2497|Drosophila melanogaster CG9696-PE...    28   6.0  
AE013599-3189|AAM70871.1| 3198|Drosophila melanogaster CG9696-PA...    28   6.0  
AE013599-3188|AAM70870.1| 3183|Drosophila melanogaster CG9696-PD...    28   6.0  

>AY047558-1|AAK77290.1|  445|Drosophila melanogaster GH07253p
           protein.
          Length = 445

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 16/47 (34%), Positives = 31/47 (65%)
 Frame = +1

Query: 253 IMELYFEEVFENLDRDALISRVKRKELVEYFNTVIDGCAKGQNKSDD 393
           I E +F++ FE + R+ L  R  R++++++ +++I GC+ GQN   D
Sbjct: 4   IFECFFDDTFEQISRNGLQDRQSRRDVLDHLSSIIKGCSGGQNSQTD 50


>AE014297-4711|AAF57120.2|  445|Drosophila melanogaster CG31006-PB,
           isoform B protein.
          Length = 445

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 16/47 (34%), Positives = 31/47 (65%)
 Frame = +1

Query: 253 IMELYFEEVFENLDRDALISRVKRKELVEYFNTVIDGCAKGQNKSDD 393
           I E +F++ FE + R+ L  R  R++++++ +++I GC+ GQN   D
Sbjct: 4   IFECFFDDTFEQISRNGLQDRQSRRDVLDHLSSIIKGCSGGQNSQTD 50


>AE014297-4710|AAF57122.3|  521|Drosophila melanogaster CG31006-PA,
           isoform A protein.
          Length = 521

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 16/47 (34%), Positives = 31/47 (65%)
 Frame = +1

Query: 253 IMELYFEEVFENLDRDALISRVKRKELVEYFNTVIDGCAKGQNKSDD 393
           I E +F++ FE + R+ L  R  R++++++ +++I GC+ GQN   D
Sbjct: 80  IFECFFDDTFEQISRNGLQDRQSRRDVLDHLSSIIKGCSGGQNSQTD 126


>AF254373-1|AAK53539.1| 2497|Drosophila melanogaster DOMINO B
           protein.
          Length = 2497

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 404 KSFWFSVSELKKVTHQTEFRGKKK 475
           KSFW +V +L +  HQT+   K+K
Sbjct: 586 KSFWSNVEKLVEYKHQTKIEEKRK 609


>AF076776-1|AAF82185.1| 3201|Drosophila melanogaster helicase DOMINO
           A protein.
          Length = 3201

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 404 KSFWFSVSELKKVTHQTEFRGKKK 475
           KSFW +V +L +  HQT+   K+K
Sbjct: 586 KSFWSNVEKLVEYKHQTKIEEKRK 609


>AE013599-3190|AAM70872.2| 2497|Drosophila melanogaster CG9696-PE,
           isoform E protein.
          Length = 2497

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 404 KSFWFSVSELKKVTHQTEFRGKKK 475
           KSFW +V +L +  HQT+   K+K
Sbjct: 586 KSFWSNVEKLVEYKHQTKIEEKRK 609


>AE013599-3189|AAM70871.1| 3198|Drosophila melanogaster CG9696-PA,
           isoform A protein.
          Length = 3198

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 404 KSFWFSVSELKKVTHQTEFRGKKK 475
           KSFW +V +L +  HQT+   K+K
Sbjct: 586 KSFWSNVEKLVEYKHQTKIEEKRK 609


>AE013599-3188|AAM70870.1| 3183|Drosophila melanogaster CG9696-PD,
           isoform D protein.
          Length = 3183

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 404 KSFWFSVSELKKVTHQTEFRGKKK 475
           KSFW +V +L +  HQT+   K+K
Sbjct: 586 KSFWSNVEKLVEYKHQTKIEEKRK 609


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,166,629
Number of Sequences: 53049
Number of extensions: 369620
Number of successful extensions: 758
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)