Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1091
(508 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 101 3e-22
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 101 4e-22
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 101 4e-22
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 100 6e-22
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 100 6e-22
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 98 4e-21
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 98 4e-21
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 98 4e-21
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 85 2e-17
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 57 9e-09
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 51 5e-07
12_02_1282 + 27528159-27529148,27529549-27529614 50 1e-06
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 45 4e-05
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 42 4e-04
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 38 0.004
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 34 0.075
06_03_0876 - 25593744-25594046,25594747-25594902,25594986-255950... 30 0.93
03_02_0519 + 9066918-9068261 30 1.2
09_04_0117 + 14813472-14814113,14814194-14814404,14814552-148148... 29 2.1
04_03_0998 - 21555696-21556080,21556177-21556254,21556333-215564... 29 2.1
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 28 5.0
03_05_0644 + 26376544-26376929,26377013-26377193,26377314-26379017 27 6.5
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 27 6.5
07_03_0463 - 18449908-18450171,18450718-18450810,18451170-184512... 27 8.7
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 101 bits (242), Expect = 3e-22
Identities = 44/47 (93%), Positives = 46/47 (97%)
Frame = -2
Query: 411 IIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 271
++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct: 328 VVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 374
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 101 bits (241), Expect = 4e-22
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = -2
Query: 411 IIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 271
++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHRKCF
Sbjct: 331 VVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHRKCF 377
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 101 bits (241), Expect = 4e-22
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = -2
Query: 411 IIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 271
++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHRKCF
Sbjct: 331 VVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHRKCF 377
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 100 bits (240), Expect = 6e-22
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = -2
Query: 411 IIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 271
++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHRKCF
Sbjct: 334 VVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPAIVHRKCF 380
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 100 bits (240), Expect = 6e-22
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = -2
Query: 411 IIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 271
++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 331 VVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 97.9 bits (233), Expect = 4e-21
Identities = 41/47 (87%), Positives = 46/47 (97%)
Frame = -2
Query: 411 IIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 271
++APPERKYSVWIGGSILASLSTFQQMWIS+ EY+ESGP+IVHRKCF
Sbjct: 331 VVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEESGPAIVHRKCF 377
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 97.9 bits (233), Expect = 4e-21
Identities = 43/47 (91%), Positives = 44/47 (93%)
Frame = -2
Query: 411 IIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 271
+IAPPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVH KCF
Sbjct: 330 VIAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPGIVHMKCF 376
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 97.9 bits (233), Expect = 4e-21
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = -2
Query: 411 IIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 271
++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVH KCF
Sbjct: 330 VVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPGIVHMKCF 376
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 85.4 bits (202), Expect = 2e-17
Identities = 43/61 (70%), Positives = 46/61 (75%), Gaps = 14/61 (22%)
Frame = -2
Query: 411 IIAPPERKYSVWIGGSILASLSTFQ--------------QMWISKQEYDESGPSIVHRKC 274
++APPERKYSVWIGGSILASLSTFQ QMWISK EYDESGP+IVHRKC
Sbjct: 331 VVAPPERKYSVWIGGSILASLSTFQQVNLTPTLYEVARMQMWISKGEYDESGPAIVHRKC 390
Query: 273 F 271
F
Sbjct: 391 F 391
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 56.8 bits (131), Expect = 9e-09
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Frame = -2
Query: 411 IIAPPE------RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 271
++ PPE +YS W+GG+ILA + Q ++K +YDE+GPSIVH+KCF
Sbjct: 346 LVKPPEYMPENLARYSAWLGGAILAKVVFPQNQHVTKGDYDETGPSIVHKKCF 398
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 51.2 bits (117), Expect = 5e-07
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = -2
Query: 396 ERKYSVWIGGSILASLSTFQQMWISKQE 313
ER++SVWIGGSILASL +FQQMW SK +
Sbjct: 442 ERRFSVWIGGSILASLGSFQQMWFSKAD 469
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = -2
Query: 360 LASLSTFQQMWISKQEYDESGPSIVHRKCF 271
LA S +MWI+K EYDESGPSIVHRKCF
Sbjct: 322 LAPSSMKIKMWIAKAEYDESGPSIVHRKCF 351
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 44.8 bits (101), Expect = 4e-05
Identities = 18/41 (43%), Positives = 29/41 (70%)
Frame = -2
Query: 411 IIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 289
+++ P ++Y+VW GGS+LAS + F + +K EY+E G SI
Sbjct: 422 VVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASI 462
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 41.5 bits (93), Expect = 4e-04
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = -2
Query: 411 IIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 289
++A P + Y+ W GGS+ AS F + +K+EY+E G SI
Sbjct: 389 VVAHPIQSYAAWFGGSVAASNPEFYESCHTKEEYEEHGASI 429
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = -2
Query: 411 IIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 271
IIA + W GGS+LA F+ M I+K EY+E G R+ F
Sbjct: 382 IIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRRRFF 428
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 33.9 bits (74), Expect = 0.075
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Frame = -2
Query: 411 IIAPPERKYSVWIGGSILASLSTFQQMW-ISKQEYDE----SGPSIVH 283
+I PP S W G +++++STF + W I K+++ + +GPS V+
Sbjct: 435 VIPPPFGTDSAWFGAKMISNVSTFTEAWCIKKKQFRQKTRRNGPSFVN 482
>06_03_0876 -
25593744-25594046,25594747-25594902,25594986-25595095,
25595429-25595520,25595613-25595657,25595775-25595920,
25596027-25596114,25596251-25596281,25596388-25596413,
25596617-25596939
Length = 439
Score = 30.3 bits (65), Expect = 0.93
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -3
Query: 476 NFQPRGFLRP--PQFSDNEDF*KESLLLQRGSTPYGSVDRSSPPSLPSNRCGSRNRSTTS 303
N+ P RP P D+ED +S P G V +S PS PS+ S RS+T+
Sbjct: 374 NWAPPYAARPRLPGAEDDED--DDSAAAASSGFPMGQVATASSPSRPSSSSCSSRRSSTA 431
Query: 302 LA 297
A
Sbjct: 432 AA 433
>03_02_0519 + 9066918-9068261
Length = 447
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 201 NGDYKPELSSRPRAAGGSTRGAF--RSTSCVQWRGQ 302
NG Y P L+ A+G S+ GA ST+C +WRG+
Sbjct: 84 NGSYAPPLTPAFNASGSSSYGAVPCPSTAC-EWRGR 118
>09_04_0117 +
14813472-14814113,14814194-14814404,14814552-14814846,
14815059-14815448,14815528-14815605,14815692-14815926
Length = 616
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -1
Query: 415 RNHCSSREEVLRMDRWIDPRLPLYLPTDVDLETGVRRV 302
+N C+ + +L MDR + P + + DVD+ T V R+
Sbjct: 537 KNKCNMEDILLEMDRVLRPEGAVIMRDDVDILTKVNRL 574
>04_03_0998 - 21555696-21556080,21556177-21556254,21556333-21556424,
21556524-21556620,21557113-21557141,21557620-21557781,
21557981-21558061,21558156-21558314,21558394-21558510,
21558598-21558666,21558753-21558831,21560884-21561050,
21561109-21561229,21561522-21561649,21562293-21562361,
21562408-21562539,21562619-21562991,21563274-21563398,
21563500-21563655,21563785-21564198,21564634-21564691,
21566522-21566648,21568047-21568305,21569005-21569104,
21569231-21569317,21569454-21569692,21569914-21569999,
21570409-21570532,21571111-21574332
Length = 2444
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 236 AGCWRQ-HARCV*KHFLCTMEGPDSSYSCFEIHICWKVEREARIDPPIHT 382
A C RQ HA+C+ LC EG ++ C + +R+ PIHT
Sbjct: 1110 AQCERQYHAKCIYGKLLCNEEGGPCAWFCGRRCQQIYMNLRSRVGIPIHT 1159
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 27.9 bits (59), Expect = 5.0
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -2
Query: 402 PPERKYSVWIGGSILASL 349
PP RK+ V++GG++LA +
Sbjct: 373 PPRRKHMVYLGGAVLAGI 390
>03_05_0644 + 26376544-26376929,26377013-26377193,26377314-26379017
Length = 756
Score = 27.5 bits (58), Expect = 6.5
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 328 DLETGVRRVWPL-HCTQEVLLNAPRVLPPAARGRL 227
DL+ GV + L C V APRVLPP AR L
Sbjct: 202 DLDDGVNGWFGLGSCALSVHGGAPRVLPPMARQSL 236
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -2
Query: 378 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 277
W G + A+ S F + S +Y E G ++ HRK
Sbjct: 669 WRGAAAFAASSKFGRHTFSLADYREHGENLFHRK 702
>07_03_0463 -
18449908-18450171,18450718-18450810,18451170-18451254,
18451607-18451705,18452099-18452238,18453036-18453482
Length = 375
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 170 ITIISYVQLN*RRLQA*IEQPAAGCWR 250
+T + +V L RLQ +E PAA CWR
Sbjct: 245 LTFVPFVVL---RLQKFLESPAATCWR 268
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,392,281
Number of Sequences: 37544
Number of extensions: 282120
Number of successful extensions: 727
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -