Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1089
         (450 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   3.1  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   3.1  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   3.1  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   4.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   4.0  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    20   9.4  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -1

Query: 243 AICRTIRKETSNAC 202
           A+C++ RK+ S++C
Sbjct: 34  ALCQSFRKQNSSSC 47


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 2/67 (2%)
 Frame = -1

Query: 294 CFVALDACELR*LQVRCAICRTIRKETSNACY--SPLFRKSIIIRLQMSPATAFSMCNCY 121
           C V      +  + V C  C    K+T + CY     F  +  +R ++         N  
Sbjct: 282 CLVIYTLVSVSLVMVTCDACTIASKQTISWCYKLQEQFVTNSEVRTELFKLAQHVSANIV 341

Query: 120 EICLRNY 100
            I   NY
Sbjct: 342 HITAGNY 348


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 2/67 (2%)
 Frame = -1

Query: 294 CFVALDACELR*LQVRCAICRTIRKETSNACY--SPLFRKSIIIRLQMSPATAFSMCNCY 121
           C V      +  + V C  C    K+T + CY     F  +  +R ++         N  
Sbjct: 282 CLVIYTLVSVSLVMVTCDACTIASKQTISWCYKLQEQFVTNSEVRTELFKLAQHVSANIV 341

Query: 120 EICLRNY 100
            I   NY
Sbjct: 342 HITAGNY 348


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = +3

Query: 24  NNKYNVDCKQYYSTNKYLIFTKISSYNF*DISHNSYTLKRQLLETFV 164
           ++ +  D +Q+Y T    IFT I       I  ++ T++     TF+
Sbjct: 59  SSSFEADLRQFYKTAYSAIFTVIDFSLCKAILVHAITIRSTFSWTFI 105


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = -1

Query: 69  YWCCSIVYNLHYIY 28
           ++C SI +N+H ++
Sbjct: 59  FYCVSITFNVHLLF 72


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 172 NKTTNVSSNCLF 137
           N  TN+S +CL+
Sbjct: 4   NPNTNISEDCLY 15


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,998
Number of Sequences: 336
Number of extensions: 2141
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)