Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1087
         (469 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7DIG3 Cluster: Fmu (Sun) domain protein; n=2; Methylob...    33   2.4  
UniRef50_Q49GP5 Cluster: Phosphatidylinositol 4-kinase type 2-be...    33   2.4  
UniRef50_Q017E5 Cluster: Predicted kinase; n=2; Ostreococcus|Rep...    33   4.1  
UniRef50_P11201 Cluster: Outer capsid protein VP4 (Hemagglutinin...    32   5.4  
UniRef50_UPI0000E8142D Cluster: PREDICTED: death inducer-obliter...    32   7.2  
UniRef50_Q4S7V1 Cluster: Chromosome 18 SCAF14712, whole genome s...    31   9.5  
UniRef50_Q30WR9 Cluster: Glyoxalase family protein; n=3; Desulfo...    31   9.5  
UniRef50_Q24VQ2 Cluster: Ni,Fe-hydrogenase small subunit; n=2; D...    31   9.5  
UniRef50_Q0JH61 Cluster: Os01g0881800 protein; n=4; Oryza sativa...    31   9.5  
UniRef50_Q9VND3 Cluster: CG2929-PA, isoform A; n=5; Coelomata|Re...    31   9.5  
UniRef50_A4RC30 Cluster: Putative uncharacterized protein; n=2; ...    31   9.5  

>UniRef50_A7DIG3 Cluster: Fmu (Sun) domain protein; n=2;
           Methylobacterium extorquens PA1|Rep: Fmu (Sun) domain
           protein - Methylobacterium extorquens PA1
          Length = 459

 Score = 33.5 bits (73), Expect = 2.4
 Identities = 22/47 (46%), Positives = 25/47 (53%)
 Frame = -1

Query: 145 LASLLIVVDPGETTVVRDVTGGVKKTPGSAAATANKAHTINLNRRPR 5
           +ASLL    PGET VV    GG  K+   AA T N AH I  +  PR
Sbjct: 251 IASLLAGAKPGET-VVDLCAGGGGKSLALAAITGNAAHIIATDADPR 296


>UniRef50_Q49GP5 Cluster: Phosphatidylinositol 4-kinase type 2-beta;
           n=7; Coelomata|Rep: Phosphatidylinositol 4-kinase type
           2-beta - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 501

 Score = 33.5 bits (73), Expect = 2.4
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +2

Query: 170 GLLYTVWLHSFHQEEVCCTCCVYRSCIIP 256
           G L   W   FH+  VCC CC  R C+IP
Sbjct: 177 GHLNPKWTKYFHK--VCCPCCFGRGCLIP 203


>UniRef50_Q017E5 Cluster: Predicted kinase; n=2; Ostreococcus|Rep:
           Predicted kinase - Ostreococcus tauri
          Length = 321

 Score = 32.7 bits (71), Expect = 4.1
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +3

Query: 321 TVSSIPLISQPIAYSAHFIKKRSPQWPVSYIPAFPSSYQFNFPK 452
           TV+S P +  P  Y  H   +    W  S+ PAF  +Y    PK
Sbjct: 239 TVASKPSVFDPAVYYGHHEAEFGMSWCASFSPAFWEAYHAKIPK 282


>UniRef50_P11201 Cluster: Outer capsid protein VP4 (Hemagglutinin)
           (Outer layer protein VP4) [Contains: Outer capsid
           protein VP8; Outer capsid protein VP5]; n=432; root|Rep:
           Outer capsid protein VP4 (Hemagglutinin) (Outer layer
           protein VP4) [Contains: Outer capsid protein VP8; Outer
           capsid protein VP5] - Human rotavirus (strain RRV)
          Length = 281

 Score = 32.3 bits (70), Expect = 5.4
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +2

Query: 281 TYHGKTPLLASTSYSF--FDSFNLATYCVFCSFYQEALSTMARELHSG 418
           TY+G+TP + +  YS   +DS N+  +C F    +E  ST    +++G
Sbjct: 176 TYNGETPNVTTKYYSTTNYDSVNMTAFCDFYIIPREEESTCTEYINNG 223


>UniRef50_UPI0000E8142D Cluster: PREDICTED: death
           inducer-obliterator 1; n=1; Gallus gallus|Rep:
           PREDICTED: death inducer-obliterator 1 - Gallus gallus
          Length = 2157

 Score = 31.9 bits (69), Expect = 7.2
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = +3

Query: 267 PS*QPPTTVKLLSWLRPPTVSSIPLISQPIAYSAHFIKKRSPQ--WPVS-YIPAFPSS 431
           P  + P   K  S L+ PT SS+PL  QP+  S    K   P+  WP S  +P+ PS+
Sbjct: 479 PKSEKPGVTK--SHLQAPTFSSLPLTKQPLKSSTGSFKGVIPKKPWPSSDSVPSKPSA 534


>UniRef50_Q4S7V1 Cluster: Chromosome 18 SCAF14712, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 18 SCAF14712, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 482

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 170 GLLYTVWLHSFHQEEVCCTCCVYRSCIIP 256
           G L   W   FH+  +CC CC  R C++P
Sbjct: 60  GHLNPKWTKYFHK--LCCPCCFGRGCLLP 86


>UniRef50_Q30WR9 Cluster: Glyoxalase family protein; n=3;
           Desulfovibrio|Rep: Glyoxalase family protein -
           Desulfovibrio desulfuricans (strain G20)
          Length = 144

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 336 PLISQPIAYSAHFIKKRSPQWPVSYIPAFP 425
           P + +P  YS +F       W V+Y+PA P
Sbjct: 106 PAVHKPWGYSGYFADPDGTPWEVAYVPALP 135


>UniRef50_Q24VQ2 Cluster: Ni,Fe-hydrogenase small subunit; n=2;
           Desulfitobacterium hafniense|Rep: Ni,Fe-hydrogenase
           small subunit - Desulfitobacterium hafniense (strain
           Y51)
          Length = 319

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = -1

Query: 169 KGEGCTTLLASLLIVVDPGETTVVRDVTGGVKKTPGSAAATANKA 35
           +G+GCT    SLL  VDPG   ++ D+   V+  P   AA+  +A
Sbjct: 66  QGQGCTGCSESLLSSVDPGPEEIILDLL-SVRYHPTLMAASGEQA 109


>UniRef50_Q0JH61 Cluster: Os01g0881800 protein; n=4; Oryza
           sativa|Rep: Os01g0881800 protein - Oryza sativa subsp.
           japonica (Rice)
          Length = 368

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +2

Query: 221 CTCCVYRSCIIPAISPVVATTYHGKTPLLASTSYSFF--DSFNLATYCV 361
           CT C YR C++ A+ PV+        P+ ++TS      D+  LA  CV
Sbjct: 235 CTACCYRLCLLAAVQPVLICR---PLPIASATSRRMLNADASQLACGCV 280


>UniRef50_Q9VND3 Cluster: CG2929-PA, isoform A; n=5; Coelomata|Rep:
           CG2929-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 710

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 179 YTVWLHSFHQEEVCCTCCVYRSCIIP 256
           +T W+H     ++CC CC  R+C+IP
Sbjct: 325 WTKWMH-----KLCCPCCFGRACLIP 345


>UniRef50_A4RC30 Cluster: Putative uncharacterized protein; n=2;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 921

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
 Frame = +3

Query: 264 LPS*QPPTTVKLLSWLRP----PTVSSIPLISQPIAYSAHFIKKRSPQWPVSYIPAFPSS 431
           LPS  P TT+ + + +RP    PT  + P  + P   SA      +P+  V  +PA PSS
Sbjct: 737 LPSILPTTTITITTTIRPTAPRPTTMTTPATTPPTTPSAP--PANTPKPSVPAVPAAPSS 794

Query: 432 YQFNFPKT 455
              +FP T
Sbjct: 795 ---SFPVT 799


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 450,318,120
Number of Sequences: 1657284
Number of extensions: 8441801
Number of successful extensions: 24303
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 23353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24271
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25610991215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)