Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1086
(470 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0633 + 26276454-26277368 33 0.15
07_03_1290 + 25537973-25538962 31 0.62
07_03_1795 + 29603694-29605208,29605423-29605649,29605739-296060... 30 0.82
07_03_1616 - 28167872-28168303 30 1.1
02_01_0725 - 5422477-5422641,5422721-5422792,5422876-5422958,542... 30 1.1
10_06_0100 + 10729164-10729562 29 1.9
04_04_0588 - 26412487-26413887 29 1.9
01_01_0079 - 603019-603129,603302-603367,603489-603554,603681-60... 29 1.9
11_06_0557 - 24955837-24956214,24957225-24957395,24957576-249576... 29 2.5
03_02_0080 + 5498638-5498699,5499121-5499190,5499551-5500711,550... 29 2.5
06_01_0894 + 6853797-6853971,6855078-6855295,6856353-6856385,685... 28 3.3
04_04_0186 - 23405477-23405566,23406204-23406275,23406914-234071... 28 3.3
04_01_0358 - 4692079-4692567 28 3.3
11_06_0645 - 25814302-25814759,25814853-25815005,25815032-258152... 28 4.4
07_03_1389 + 26212117-26212119,26212721-26212875,26213402-262134... 28 4.4
07_01_0925 - 7771465-7772195,7772284-7772431,7773706-7774317 28 4.4
07_01_0626 - 4681826-4682707 28 4.4
05_05_0257 + 23651353-23651733,23651827-23651958 28 4.4
12_02_1122 - 26244667-26245299 27 5.8
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859... 27 5.8
08_01_0107 - 789217-789984,790070-790219,790303-790890,790968-79... 27 5.8
02_04_0388 - 22564866-22565216,22565437-22565445 27 5.8
01_06_1171 - 35089719-35090336,35090596-35090715,35090851-350911... 27 5.8
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 27 7.6
07_01_0285 - 2084560-2085246 27 7.6
06_03_1310 + 29238644-29240260 27 7.6
06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804 27 7.6
05_04_0226 + 19215091-19215172,19215281-19215394,19215508-192155... 27 7.6
05_01_0290 + 2270749-2271037,2272227-2272363,2272660-2272805,227... 27 7.6
03_05_0774 - 27615899-27617134 27 7.6
02_05_1000 + 33417357-33417600,33417692-33417744,33418376-334184... 27 7.6
02_02_0586 - 11861509-11861637,11863651-11863815,11864738-118648... 27 7.6
01_01_0706 + 5442163-5442482,5443125-5443236,5444523-5444852 27 7.6
01_01_0601 - 4476261-4476728 27 7.6
>03_05_0633 + 26276454-26277368
Length = 304
Score = 32.7 bits (71), Expect = 0.15
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +2
Query: 164 RQNSRQGKGGKVKRLVRSTSFPSPSPSGRRMAVVGATTTSPLGRQTIRSPPRW 322
R+ +R+G GG V+R PSPSPS R G + G PRW
Sbjct: 200 RRAARRGDGGGVRRDAAVPQRPSPSPSPLRSGADGQGSPPTGGTSLPLLRPRW 252
>07_03_1290 + 25537973-25538962
Length = 329
Score = 30.7 bits (66), Expect = 0.62
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -2
Query: 346 SKNSF*PAPSRRASNSL-PTERAGGRGADDRHPAS 245
S +S + SRRA+ SL P GG GADD +P+S
Sbjct: 148 SSSSSASSRSRRATRSLSPFRGGGGGGADDEYPSS 182
>07_03_1795 +
29603694-29605208,29605423-29605649,29605739-29606071,
29606229-29606475,29606948-29607076,29607161-29607376,
29607454-29607577,29608377-29608612
Length = 1008
Score = 30.3 bits (65), Expect = 0.82
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 255 WRSSAPRPPALSVGRLFEARLDG 323
WRSSAP P A+ + RL ++ LDG
Sbjct: 33 WRSSAPVPRAVPLSRLTDSFLDG 55
>07_03_1616 - 28167872-28168303
Length = 143
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 119 LKPPVAQQPTSKPRMRQNSRQGKGGKVKRLVRSTSFPSPSPSGRRMA-VVGATTTSPLGR 295
L P A S PR + G G + RL S PSPSP+ +A AT++S L R
Sbjct: 12 LTSPAASGILSAPRPGCAALAGSGALLPRLDGVPSSPSPSPAPPLLARSFSATSSSRLPR 71
Query: 296 QTIRS 310
+ R+
Sbjct: 72 EFSRT 76
>02_01_0725 -
5422477-5422641,5422721-5422792,5422876-5422958,
5423113-5423173,5423305-5423381,5423456-5423522,
5423770-5423803,5423894-5423974,5424285-5424436,
5424529-5424615,5425019-5425126,5425906-5426259
Length = 446
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 227 PSPSPS-GRRMAVVGATTTSPLGRQTIRSPPRWRRL 331
P P PS GRR+ V G +PLGR P W RL
Sbjct: 32 PPPRPSAGRRVVVTGLGAVTPLGRGV---GPTWDRL 64
>10_06_0100 + 10729164-10729562
Length = 132
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 233 PSPSGRRMAVVGATTTSPLGRQTIRSPPRW 322
PSP+ A+ GATTT + PRW
Sbjct: 42 PSPTATATAIAGATTTGAAASSSGGEQPRW 71
>04_04_0588 - 26412487-26413887
Length = 466
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/88 (20%), Positives = 33/88 (37%)
Frame = +2
Query: 50 SGGNRRTSAFSGDTGRGMSESN*LKPPVAQQPTSKPRMRQNSRQGKGGKVKRLVRSTSFP 229
+GG RTS S S+ L PP + + R+ + + + P
Sbjct: 280 AGGKGRTSVSSSAAAAASCSSSSLSPPETPDDANTQQQAPQQREQRDTAGVSMEKKQPQP 339
Query: 230 SPSPSGRRMAVVGATTTSPLGRQTIRSP 313
P+P+ R+ G +P + + +P
Sbjct: 340 -PAPTSRQEGCSGGDAAAPYPAEMLHAP 366
>01_01_0079 -
603019-603129,603302-603367,603489-603554,603681-603824,
603932-604429
Length = 294
Score = 29.1 bits (62), Expect = 1.9
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +2
Query: 86 DTGRGMSESN*LKPP--VAQQ---PTSKPRMRQNSRQGKGGKVKRLVRSTSFPSPSPS 244
D G + ESN KPP A++ P+ + R + KG K + S S PSPSPS
Sbjct: 142 DNGLEIHESNVSKPPPPAAKKRACPSGEARAAGKKQCRKGSKPNKAA-SASSPSPSPS 198
>11_06_0557 -
24955837-24956214,24957225-24957395,24957576-24957635,
24958419-24958623,24958710-24958953,24959103-24959394,
24959734-24960828,24960915-24961409,24961665-24961823,
24961893-24962387
Length = 1197
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 325 APSRRASNSLPTERAGGRGADDRHPASRGGG 233
+P+ RA++ P AGG+G P S GGG
Sbjct: 54 SPASRAASPPPPTAAGGQGGVGGGPVSGGGG 84
>03_02_0080 +
5498638-5498699,5499121-5499190,5499551-5500711,
5500940-5501029,5501147-5501464
Length = 566
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +1
Query: 91 WAGYVRVELTKTSCRSTTNVQ---TSHETELKTRQRGESEAFSAEHIFPITLPLGTPDGG 261
W G + VE S ++TT + SH + K ++ G S A H T+P G G
Sbjct: 475 WDGVMVVEDLSLSTKTTTKLDGAANSHCSNGKAKKGGASTPKKAAHRRTTTVPTGKGQSG 534
Query: 262 RR 267
R
Sbjct: 535 ER 536
>06_01_0894 +
6853797-6853971,6855078-6855295,6856353-6856385,
6856776-6856856,6856857-6857069,6857184-6857381,
6857456-6857593,6858528-6858644,6858970-6859104
Length = 435
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 234 PPPRDAGWRSSAPRPPALSVGRLFEARLDGA 326
PPP AG + R P S GR+F L A
Sbjct: 10 PPPFTAGRLPTTSRRPCFSAGRIFRCSLPAA 40
>04_04_0186 -
23405477-23405566,23406204-23406275,23406914-23407198,
23407300-23407305
Length = 150
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 297 CRPRGLVVVAPTTAIRRPEGEGDGKDVLR 211
CR + + +VA T + E GDGKD L+
Sbjct: 16 CRSKAMALVAGATGVSSVEVTGDGKDRLQ 44
>04_01_0358 - 4692079-4692567
Length = 162
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/62 (20%), Positives = 29/62 (46%)
Frame = +2
Query: 119 LKPPVAQQPTSKPRMRQNSRQGKGGKVKRLVRSTSFPSPSPSGRRMAVVGATTTSPLGRQ 298
++PP + +P + + +GG+ + ++ + P+P P R + T+S L Q
Sbjct: 78 IRPPTSMHQQIQPPLSRVDEGRRGGRDQAMMTRRTGPTPRPGRARPRLGRRVTSSSLAAQ 137
Query: 299 TI 304
+
Sbjct: 138 DL 139
>11_06_0645 -
25814302-25814759,25814853-25815005,25815032-25815214,
25815342-25815531,25815624-25815784,25816136-25816623,
25817035-25817075
Length = 557
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +2
Query: 212 RSTSFPSPSPSGRRMAVVGATTTSPLGRQTIRSPPRWRRLE 334
RS S P P M G + +SP G R RWRR E
Sbjct: 495 RSLSTPPPVRGAASMRNRGISFSSPRGTGGRRGTGRWRRAE 535
>07_03_1389 +
26212117-26212119,26212721-26212875,26213402-26213479,
26214211-26214375,26214453-26214554,26214661-26214786,
26215454-26215490
Length = 221
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2
Query: 316 RRASNSLPTERAGGRGAD 263
RRAS+ +P +R GGRG D
Sbjct: 21 RRASSPIPRDRYGGRGRD 38
>07_01_0925 - 7771465-7772195,7772284-7772431,7773706-7774317
Length = 496
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 328 PAPSRRASNSLPTERAGGRGA 266
P P R + SLP E+ GGRG+
Sbjct: 42 PPPPPRVAKSLPREQPGGRGS 62
>07_01_0626 - 4681826-4682707
Length = 293
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 109 VELTKTSCRSTTNVQTSHETELKTRQRGESEAFSAEHIFPITLPLGTP 252
V++T T C T + + TR ES + EH+FP T+ TP
Sbjct: 31 VDMTPTKCL------TLGPSSITTRPAVESSLAAPEHVFPATMNSSTP 72
>05_05_0257 + 23651353-23651733,23651827-23651958
Length = 170
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = -3
Query: 318 LGGLRIVCRPRG---LVVVAPTTAIRRPEGEGDGKD 220
LGG R+V R RG L+ VAP A +G G G D
Sbjct: 87 LGGGRVVARIRGQLVLLEVAPLAAYAGGDGGGGGDD 122
>12_02_1122 - 26244667-26245299
Length = 210
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -2
Query: 328 PAPSRRASNSLPTERAGGRGAD--DRHPASRGGG 233
P+P AS S+P R GG G D + SRGGG
Sbjct: 30 PSPGG-ASPSIPPGRGGGGGTSGGDNNRGSRGGG 62
>11_06_0561 -
24984960-24985205,24985283-24985354,24985906-24985977,
24986612-24986782,24987464-24987653,24987733-24987976,
24988162-24988474,24988687-24989517,24989628-24989672,
24989677-24989790,24989877-24990371,24990627-24990824,
24990902-24991357
Length = 1148
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 325 APSRRASNSLPTERAGGRGADDRHPASRGGG 233
+P+ RA++ PT AGG+G P S GGG
Sbjct: 55 SPAPRAASPPPTA-AGGQGGGGGGPVSGGGG 84
>08_01_0107 -
789217-789984,790070-790219,790303-790890,790968-791093
Length = 543
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +2
Query: 125 PPVAQQPTSKPRMRQNSRQGKGGKVKR--LVRSTSFPSPSP 241
P P R+R ++ KG + +R L R +S PSP+P
Sbjct: 22 PSKDDSPNKAARLRDDTDDDKGKRERRRWLFRKSSSPSPAP 62
>02_04_0388 - 22564866-22565216,22565437-22565445
Length = 119
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 297 CRPRGLVVVAPTTAIRRPEGEGDGKDVL 214
CR + + +VA TT + GDGKD L
Sbjct: 17 CRSKAMALVASTTGVDSVALAGDGKDQL 44
>01_06_1171 -
35089719-35090336,35090596-35090715,35090851-35091108,
35091934-35092563
Length = 541
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 167 QNSRQGKGGKVK--RLVRSTSFPSPSPSGRRMAVVGA 271
Q+ +GKGG +K R P PSP G+ + G+
Sbjct: 92 QDDSRGKGGSIKGHRFSNPLPLPLPSPEGKSLRNFGS 128
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -2
Query: 313 RASNSLPTERAGGRGADDRHPASRGGG 233
R + P GRG D +P RGGG
Sbjct: 32 RGRDGAPYSGGRGRGQDGSYPGGRGGG 58
>07_01_0285 - 2084560-2085246
Length = 228
Score = 27.1 bits (57), Expect = 7.6
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = +1
Query: 157 SHETELKTRQRGESEAFSAEHIFPITLPLGTPDG----GRRRHDHQPSRSADYSKPA*MA 324
SH EL+ R S AF PI +P+G P+ G R + S SA P+
Sbjct: 54 SHLVELEDTGRRRSAAFVPSRHDPIYVPIGRPNPLGPIGHREDYYSGSGSATAFFPSSRD 113
Query: 325 PVRM 336
PV +
Sbjct: 114 PVHV 117
>06_03_1310 + 29238644-29240260
Length = 538
Score = 27.1 bits (57), Expect = 7.6
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = +2
Query: 128 PVAQQPTSKPRMRQNSRQGKGGKVK-RLVRSTSF--PSPSPSGRRM---AVVGATTTSP 286
PV P+S P + QG GGK+ V ++ P P PSG ++ V G +SP
Sbjct: 472 PVPGTPSSPPSSSWSPPQGGGGKLPFPPVHGVAYSSPPPPPSGDKLPFPPVYGVAYSSP 530
>06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804
Length = 1209
Score = 27.1 bits (57), Expect = 7.6
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 230 SPSPSGRRMAVVGATTTSPLGRQTIRSPPRWRRLE*VFASRINILSLFDVPIT 388
S S G+R+ VG T+ +P T S P W + + +LS V IT
Sbjct: 416 SSSSHGQRVYEVGPTSRTPKKATTTTSLPPWPVRKRASSGAFEVLSSMPVGIT 468
>05_04_0226 +
19215091-19215172,19215281-19215394,19215508-19215590,
19215682-19215820,19215862-19216191,19216414-19216693,
19216795-19216956,19217134-19217349,19217458-19217495,
19217597-19217760,19217833-19217946,19218042-19218083,
19218180-19218983
Length = 855
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 130 CRSTTNVQTSHETELK-TRQRGESEAFSAEHIF 225
C S + SHETEL+ + +AF +H+F
Sbjct: 211 CSSIVQIDPSHETELQFVPSDKDRKAFKFDHVF 243
>05_01_0290 +
2270749-2271037,2272227-2272363,2272660-2272805,
2272853-2272877
Length = 198
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 328 PAPSRRASNSLPTERAGGRGADDRHPASRGGG*WERCAP 212
PAP+ R +++ GG G DD ++G G + AP
Sbjct: 31 PAPAPRLRSTIAGGGGGGGGGDDGQRKTKGRGFRDDAAP 69
>03_05_0774 - 27615899-27617134
Length = 411
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 53 GGNRRTSAFSGDTGRGMSESN*LKPPVAQQPTSKP 157
GGNRR+ G G E KPPV + ++ P
Sbjct: 330 GGNRRSGGALGTNGETKPEPVAEKPPVVEAKSTAP 364
>02_05_1000 +
33417357-33417600,33417692-33417744,33418376-33418413,
33418720-33419114,33420092-33420221,33420512-33421343
Length = 563
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 266 GATTTSPLGRQTIRSPPRWRRLE*VFASR 352
G TTTS G +PP+W +LE + SR
Sbjct: 382 GCTTTSSNGGGVGVAPPQWPKLEALLPSR 410
>02_02_0586 -
11861509-11861637,11863651-11863815,11864738-11864846,
11864971-11865065,11865169-11865702,11866299-11866499,
11867826-11868090,11868111-11868736
Length = 707
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 291 PRGLVVVAPTTAIRRPEGEGDGKDVLRTKRFTFPPLPC 178
P L ++A A+ P G L++ F+ PPLPC
Sbjct: 515 PPALALLATLLALD-PAARGTAAQALQSSFFSTPPLPC 551
>01_01_0706 + 5442163-5442482,5443125-5443236,5444523-5444852
Length = 253
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 210 CGAHLSHHPPPRDAGW 257
CG L H P PRDA W
Sbjct: 123 CGIVLRHVPGPRDANW 138
>01_01_0601 - 4476261-4476728
Length = 155
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 295 PTERAGGRGADDRHPASRGGG 233
P R+GGRG +R P + GG
Sbjct: 134 PMRRSGGRGEGERRPEAEKGG 154
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,572,164
Number of Sequences: 37544
Number of extensions: 395817
Number of successful extensions: 1683
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1677
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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