Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1084
         (417 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    24   0.68 
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   1.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   2.1  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   2.8  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   6.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    20   8.4  

>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 23.8 bits (49), Expect = 0.68
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
 Frame = +1

Query: 115 MRAFVV--LACVAMAYGRPEPPVGYSY 189
           MR FV+  +ACV++A  RPE      Y
Sbjct: 1   MRFFVIFFVACVSVALARPEDQYTIKY 27


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 215 ASALPLSAADTELCYWWSFWIPRW 286
           + AL  +  D  +CYW ++   RW
Sbjct: 15  SGALVSATTDKVVCYWGTWSTYRW 38


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 411 NPNPASPQKLKPLAAAKGESTTGD 340
           N NP +P   +PL + K E    D
Sbjct: 102 NHNPLTPPNSEPLVSPKSEKEEKD 125


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 43  LIGY*INYHRVS 78
           L+GY INY R+S
Sbjct: 112 LLGYSINYRRIS 123


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +3

Query: 141 CGYGLWPP*TSSGI 182
           CG+G W P    G+
Sbjct: 467 CGFGPWKPSMHGGV 480


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 164 LNLQWDTATPLPEVTHEASAL 226
           LNL ++  + +P VTH  + L
Sbjct: 495 LNLDYNDLSAVPIVTHSLTEL 515


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,678
Number of Sequences: 336
Number of extensions: 1387
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)