Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1084
         (417 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT028801-1|ABI34182.1|  286|Drosophila melanogaster LP21747p pro...    34   0.087
BT004476-1|AAO42640.1|  286|Drosophila melanogaster LP07342p pro...    34   0.087
AJ271041-1|CAB66004.1|  286|Drosophila melanogaster Gly-rich pro...    34   0.087
AE014297-4048|AAF56656.1|  286|Drosophila melanogaster CG5812-PA...    34   0.087
BT021279-1|AAX33427.1|  392|Drosophila melanogaster RE40185p pro...    31   0.46 
AY119481-1|AAM50135.1| 1288|Drosophila melanogaster GH07148p pro...    29   3.3  
AE014298-1522|AAF47973.2| 1288|Drosophila melanogaster CG1582-PA...    29   3.3  
AE014297-4038|AAF56647.1|  360|Drosophila melanogaster CG14254-P...    28   4.3  
AY070665-1|AAL48136.1|  123|Drosophila melanogaster RH04612p pro...    27   10.0 
AE014134-2269|AAF53234.1|  743|Drosophila melanogaster CG5075-PA...    27   10.0 

>BT028801-1|ABI34182.1|  286|Drosophila melanogaster LP21747p
           protein.
          Length = 286

 Score = 33.9 bits (74), Expect = 0.087
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +1

Query: 115 MRAFVVLACVAMAYGRPEPPVGYSYSAP 198
           M+AF++++C+A+A  RPE   GY+Y+ P
Sbjct: 1   MKAFILMSCLALAAARPE--AGYNYNRP 26


>BT004476-1|AAO42640.1|  286|Drosophila melanogaster LP07342p
           protein.
          Length = 286

 Score = 33.9 bits (74), Expect = 0.087
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +1

Query: 115 MRAFVVLACVAMAYGRPEPPVGYSYSAP 198
           M+AF++++C+A+A  RPE   GY+Y+ P
Sbjct: 1   MKAFILMSCLALAAARPE--AGYNYNRP 26


>AJ271041-1|CAB66004.1|  286|Drosophila melanogaster Gly-rich
           protein protein.
          Length = 286

 Score = 33.9 bits (74), Expect = 0.087
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +1

Query: 115 MRAFVVLACVAMAYGRPEPPVGYSYSAP 198
           M+AF++++C+A+A  RPE   GY+Y+ P
Sbjct: 1   MKAFILMSCLALAAARPE--AGYNYNRP 26


>AE014297-4048|AAF56656.1|  286|Drosophila melanogaster CG5812-PA
           protein.
          Length = 286

 Score = 33.9 bits (74), Expect = 0.087
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +1

Query: 115 MRAFVVLACVAMAYGRPEPPVGYSYSAP 198
           M+AF++++C+A+A  RPE   GY+Y+ P
Sbjct: 1   MKAFILMSCLALAAARPE--AGYNYNRP 26


>BT021279-1|AAX33427.1|  392|Drosophila melanogaster RE40185p
           protein.
          Length = 392

 Score = 31.5 bits (68), Expect = 0.46
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
 Frame = +1

Query: 73  VSSKRISLVSSKHKMRAFVVL---ACVAMAYGRPEPPVGYSY 189
           +SSK   +  SK ++ +  V+   + VA   GRPEPP  YSY
Sbjct: 21  LSSKGFPITRSKMRVSSLFVVCVASLVATTLGRPEPPSPYSY 62


>AY119481-1|AAM50135.1| 1288|Drosophila melanogaster GH07148p
           protein.
          Length = 1288

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 417 GPNPNPASPQKLKPLAAAKGESTTGDRVHQKSVRRQ 310
           G NP+    Q  KP   A+G+++  D  HQ++V  Q
Sbjct: 388 GVNPDAEHHQSPKPSHYARGQTSRNDGGHQRNVEAQ 423


>AE014298-1522|AAF47973.2| 1288|Drosophila melanogaster CG1582-PA
           protein.
          Length = 1288

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 417 GPNPNPASPQKLKPLAAAKGESTTGDRVHQKSVRRQ 310
           G NP+    Q  KP   A+G+++  D  HQ++V  Q
Sbjct: 388 GVNPDAEHHQSPKPSHYARGQTSRNDGGHQRNVEAQ 423


>AE014297-4038|AAF56647.1|  360|Drosophila melanogaster CG14254-PA
           protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +1

Query: 130 VLACVAMAYGRPEPPVGYSY 189
           V + VA   GRPEPP  YSY
Sbjct: 11  VASLVATTLGRPEPPSPYSY 30


>AY070665-1|AAL48136.1|  123|Drosophila melanogaster RH04612p
           protein.
          Length = 123

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 64  YHRVSSKRISLVSSKHKMRAFVVLACVAMAYGRPEPP 174
           Y  +S  R+ L S++H      +L+CV  A  RP PP
Sbjct: 72  YAAMSPLRMWLRSARHWALLPCILSCVPPAATRPRPP 108


>AE014134-2269|AAF53234.1|  743|Drosophila melanogaster CG5075-PA
           protein.
          Length = 743

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = -1

Query: 411 NPNPASPQKLKPLAAAKG-ESTTGDRVHQKSVRRQGKCCLQKGHLGIQND 265
           NP P  PQ  KP+A  +    T  D    K +RR      +  H+ ++ +
Sbjct: 64  NPVPPPPQSRKPVAEPESPHDTVNDEDSLKDLRRSTDQSHKSAHIALEKN 113


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,779,265
Number of Sequences: 53049
Number of extensions: 290959
Number of successful extensions: 1016
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1251032760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)