Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1083
         (444 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC093886-1|AAH93886.1|  471|Homo sapiens solute carrier family 1...    29   7.2  
BC093860-1|AAH93860.1|  471|Homo sapiens solute carrier family 1...    29   7.2  
AK074674-1|BAC11128.1|  471|Homo sapiens protein ( Homo sapiens ...    29   7.2  

>BC093886-1|AAH93886.1|  471|Homo sapiens solute carrier family 16,
           member 11 (monocarboxylic acid transporter 11) protein.
          Length = 471

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = +1

Query: 148 SAYFCREAVMRFGLR---GGAAVVTIHETLELVSQG-GWRFTLWMSMGSSNHLTPGG 306
           S YF R  V+  GL     GA+ + +   L+L+    GWR  L +    + HLTP G
Sbjct: 155 SRYFSRRRVLAVGLALTGNGASSLLLAPALQLLLDTFGWRGALLLLGAITLHLTPCG 211


>BC093860-1|AAH93860.1|  471|Homo sapiens solute carrier family 16,
           member 11 (monocarboxylic acid transporter 11) protein.
          Length = 471

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = +1

Query: 148 SAYFCREAVMRFGLR---GGAAVVTIHETLELVSQG-GWRFTLWMSMGSSNHLTPGG 306
           S YF R  V+  GL     GA+ + +   L+L+    GWR  L +    + HLTP G
Sbjct: 155 SRYFSRRRVLAVGLALTGNGASSLLLAPALQLLLDTFGWRGALLLLGAITLHLTPCG 211


>AK074674-1|BAC11128.1|  471|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90193 fis, clone MAMMA1001237, weakly similar to
           MONOCARBOXYLATE TRANSPORTER 2. ).
          Length = 471

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = +1

Query: 148 SAYFCREAVMRFGLR---GGAAVVTIHETLELVSQG-GWRFTLWMSMGSSNHLTPGG 306
           S YF R  V+  GL     GA+ + +   L+L+    GWR  L +    + HLTP G
Sbjct: 155 SRYFSRRRVLAVGLALTGNGASSLLLAPALQLLLDTFGWRGALLLLGAITLHLTPCG 211


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,727,785
Number of Sequences: 237096
Number of extensions: 1903639
Number of successful extensions: 3510
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3510
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)