Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1081
         (324 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.            30   1.8  
AK097297-1|BAC04995.1|  261|Homo sapiens protein ( Homo sapiens ...    29   3.2  
BC017927-1|AAH17927.1|  350|Homo sapiens LRAP protein protein.         29   4.3  
U78554-1|AAC51344.1|  644|Homo sapiens mucin protein.                  28   7.4  

>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
          Length = 3570

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +1

Query: 238  TISQTPGVKWLL-EPTNIHNVYAPP 309
            T+S TPG  W+L EP+    V APP
Sbjct: 3055 TLSSTPGTTWILTEPSTTATVTAPP 3079



 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +1

Query: 238  TISQTPGVKWLL-EPTNIHNVYAP 306
            T+S TPG  W+L EP+ I  V  P
Sbjct: 3453 TLSSTPGTTWILTEPSTIATVMVP 3476


>AK097297-1|BAC04995.1|  261|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39978 fis, clone SPLEN2029380. ).
          Length = 261

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +2

Query: 62  LHEIHISIIFLNNRYWIY-FLIFFLPVHIIFYFTIFCVLTTAHI*ITIQVKFFFIA 226
           +H  ++S  FL+  ++++ F    LP H I Y    CV     + + + V   +++
Sbjct: 77  IHCHYVSAFFLSPCFFLHLFFCICLPYHFISYLISLCVCVCVCVCVCLSVSVIYVS 132


>BC017927-1|AAH17927.1|  350|Homo sapiens LRAP protein protein.
          Length = 350

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -2

Query: 95  LKK*SIYEFHVIIFIYTNNTDFNL 24
           L K  +++FH+I+FI+ + T F+L
Sbjct: 320 LSKLGMFKFHIIVFIFAHKTCFDL 343


>U78554-1|AAC51344.1|  644|Homo sapiens mucin protein.
          Length = 644

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +1

Query: 238 TISQTPGVKWLL-EPTNIHNVYAP 306
           T+S TPG  W+L EP+ I  V  P
Sbjct: 58  TLSSTPGTTWILTEPSTIATVMVP 81


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,891,227
Number of Sequences: 237096
Number of extensions: 928972
Number of successful extensions: 1506
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1505
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)